CN185784

Overview
NameCN185784
Unique NameCN185784
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length704
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185784 vs. ExPASy Swiss-Prot
Match: CATL1_BOVIN (Cathepsin L1 OS=Bos taurus GN=CTSL1 PE=1 SV=3)

HSP 1 Score: 96.2857 bits (238), Expect = 1.712e-19
Identity = 59/142 (41.55%), Postives = 77/142 (54.23%), Query Frame = -3
Query:  298 LDSEEAYPSPGKE-GVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 702
            LDSEE+YP    +   C +  E         V+I    E  L  AV  V P+SVA +     F+FYKSG+Y    C +   D++H V+ VGYG E    +   +W++KNSWG  WG +GY KM   + N CGIAT ASYP V
Sbjct:  196 LDSEESYPYLATDTNSCNYKPECSAANDTGFVDIPQ-REKALMKAVATVGPISVAIDAGHTSFQFYKSGIYYDPDCSSK--DLDHGVLVVGYGFEGTDSNNNKFWIVKNSWGPEWGWNGYVKMAKDQNNHCGIATAASYPTV 334          
BLAST of CN185784 vs. ExPASy Swiss-Prot
Match: CPP1_ENTHI (Cysteine proteinase 1 OS=Entamoeba histolytica GN=CPP1 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.236e-19
Identity = 53/132 (40.15%), Postives = 71/132 (53.79%), Query Frame = -3
Query:  304 EEAYPSPGKEGVCKFSSENVGVQVLDSVNITLGAEDELQHAV--GLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYP 693
            E  YP  G +  C+ S      ++     +    E EL+ A+  GLV  VS+    V  F+ YKSG Y+ T+C N    +NH V AVGYGV DG   W+++NSWG  WG+ GY  M +  N CG+AT   YP
Sbjct:  181 ESDYPYTGSDSTCR-SDVKAFAKIKSYNRVARNNEVELKAAISQGLV-DVSIDASSVQ-FQLYKSGAYTDTQCKNNYFALNHEVCAVGYGVVDGKECWIVRNSWGTGWGEKGYINMVIEGNTCGVATDPLYP 309          
BLAST of CN185784 vs. ExPASy Swiss-Prot
Match: CATL6_HUMAN (Putative cathepsin L-like protein 6 OS=Homo sapiens GN=CTSLL6 PE=5 SV=3)

HSP 1 Score: 95.9005 bits (237), Expect = 2.236e-19
Identity = 60/142 (42.25%), Postives = 78/142 (54.93%), Query Frame = -3
Query:  298 LDSEEAYPSPGKEGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNSW-GENWGDHGYFKMEMGK-NMCGIATCASYPVV 702
            LDSE +YP  GK   C+++ +         V+I    E +L  AV  V P+SVA       F+FYK G+Y   +C   P  ++HA++ VGY  E    D   YWL+KNS  G+NWG  GY KM   + N CGIAT ASYP V
Sbjct:  139 LDSEASYPYEGKVKTCRYNPKYSAANDTGFVDIP-SQEKDLAKAVATVGPISVAAGASHVSFQFYKKGIYFEPRCD--PEGLDHAMLLVGYSYEGADSDNNKYWLVKNSSEGKNWGMDGYIKMAKDRRNNCGIATAASYPTV 277          
BLAST of CN185784 vs. ExPASy Swiss-Prot
Match: CATL1_FELCA (Cathepsin L1 (Fragment) OS=Felis catus GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.236e-19
Identity = 52/122 (42.62%), Postives = 69/122 (56.56%), Query Frame = -3
Query:  352 LDSEEAYPSPGKEGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNSWGENWGDHGYFKM 702
            LDSEE+YP   +   CK+  EN    V D  +I    E+EL   +  V P+S A +  +D FRFYK G+Y    C +   DV+H V+ VGYG +    +   YW+IKNSWG +WG  GY KM
Sbjct:   17 LDSEESYPYHAQGDSCKYRPENSVANVTDYWDIP-SKENELMITLAAVGPISAAIDASLDTFRFYKEGIYYDPSCSSE--DVDHGVLVVGYGADGTETENKKYWIIKNSWGTDWGMDGYIKM 135          
BLAST of CN185784 vs. ExPASy Swiss-Prot
Match: CYSEP_VIGMU (Vignain OS=Vigna mungo PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.920e-19
Identity = 54/141 (38.30%), Postives = 78/141 (55.32%), Query Frame = -3
Query:  301 LDSEEAYPSPGKEGVCKFSSEN-VGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDG-FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE-DGVPYWLIKNSWGENWGDHGYFKMEMG----KNMCGIATCASYPV 702
            + +E  YP   +EG C  S  N + V +    N+ +  E+ L  AV   +PVSVA +     F+FY  GV++    G+   D+NH V  VGYG   DG  YW+++NSWG  WG+ GY +M+      + +CGIA  ASYP+
Sbjct:  209 ITTESNYPYTAQEGTCDESKVNDLAVSIDGHENVPVNDENALLKAVAN-QPVSVAIDAGGSDFQFYSEGVFT----GDCNTDLNHGVAIVGYGTTVDGTNYWIVRNSWGPEWGEQGYIRMQRNISKKEGLCGIAMMASYPI 344          
BLAST of CN185784 vs. ExPASy Swiss-Prot
Match: CATLL_PHACE (Cathepsin L-like proteinase OS=Phaedon cochleariae PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.920e-19
Identity = 50/139 (35.97%), Postives = 78/139 (56.12%), Query Frame = -3
Query:  295 LDSEEAYPSPGKEGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDG--FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKM-EMGKNMCGIATCASYPVVA 702
            L+S+  YP  GKE  CK + ++  V  L        +E  L+ AVG + P+S    VV G   + Y  G++  + C     +++H V  VGYG+E+G  YW+IKN+WG +WG+ GY ++     + CG+   ASYP++A
Sbjct:  191 LESDADYPYSGKEDKCKANDKSRSVVELTGYKKVTASETSLKEAVGTIGPISA---VVFGKPMKSYGGGIFDDSSCLGD--NLHHGVNVVGYGIENGQKYWIIKNTWGADWGESGYIRLIRDTDHSCGVEKMASYPILA 324          
BLAST of CN185784 vs. ExPASy Swiss-Prot
Match: CYSEP_RICCO (Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.506e-19
Identity = 56/141 (39.72%), Postives = 77/141 (54.61%), Query Frame = -3
Query:  301 LDSEEAYPSPGKEGVCKFSSENVGVQVLDS-VNITLGAEDELQHAVGLVRPVSVAFEVVDG-FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE-DGVPYWLIKNSWGENWGDHGYFKMEMG----KNMCGIATCASYPV 702
            + +E  YP    +G C  S EN     +D   N+    E+ L  AV   +PVSVA +     F+FY  GV++ + CG    +++H V  VGYG   DG  YW +KNSWG  WG+ GY +ME G    + +CGIA  ASYP+
Sbjct:  207 ITTEANYPYEAYDGTCDVSKENAPAVSIDGHENVPENDENALLKAVAN-QPVSVAIDAGGSDFQFYSEGVFTGS-CGT---ELDHGVAIVGYGTTIDGTKYWTVKNSWGPEWGEKGYIRMERGISDKEGLCGIAMEASYPI 342          
BLAST of CN185784 vs. ExPASy Swiss-Prot
Match: CATV_NPVHZ (Viral cathepsin OS=Heliothis zea nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.506e-19
Identity = 41/126 (32.54%), Postives = 74/126 (58.73%), Query Frame = -3
Query:  325 LDSEEAYPSPGKEGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 702
            +++E  YP  G E +C   +  + V++       +  E++L+  V    PV++A + +D    Y+ G+ +         D+NHAV+ +G+G+E+ VPYW+IKNSWGE+WG++G+ ++    N CG+
Sbjct:  236 VETEADYPYQGSEQMCTLDNRKIAVKLNSCFKYDIRDENKLKELVYTTGPVAIAVDAMDIIN-YRRGILNQCHI----YDLNHAVLLIGWGIENNVPYWIIKNSWGEDWGENGFLRVRRNVNACGL 356          
BLAST of CN185784 vs. ExPASy Swiss-Prot
Match: CYSP2_HORVU (Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=EPB2 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.497e-19
Identity = 59/151 (39.07%), Postives = 82/151 (54.30%), Query Frame = -3
Query:  280 LDSEEAYPSPGKEGVCKFS----SENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPYWLIKNSWGENWGDHGYFKMEMGK----NMCGIATCASYPVVA*SAPE 702
            L +E AYP     G C  +    +  V V +    ++   +E++L  AV   +PVSVA E     F FY  GV++  +CG    +++H V  VGYGV EDG  YW +KNSWG +WG+ GY ++E        +CGIA  ASYPV   S P+
Sbjct:  215 LITEAAYPYRAARGTCNVARAAQNSPVVVHIDGHQDVPANSEEDLARAVAN-QPVSVAVEASGKAFMFYSEGVFTG-ECGT---ELDHGVAVVGYGVAEDGKAYWTVKNSWGPSWGEQGYIRVEKDSGASGGLCGIAMEASYPVKTYSKPK 360          
BLAST of CN185784 vs. ExPASy Swiss-Prot
Match: CATV_NPVHC (Viral cathepsin OS=Hyphantria cunea nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.497e-19
Identity = 47/126 (37.30%), Postives = 71/126 (56.35%), Query Frame = -3
Query:  325 LDSEEAYPSPGKEGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 702
            + +E  YP  G +G C+       V+V          E++L+  + +V P+ VA +  D    Y+ G+     C N     NHAV+ VGYGVE+ VPYW++KN+WGE+WG+ GYF+++   N CGI
Sbjct:  193 VQAENDYPYEGSDGNCRVDVAKFVVKVKKCYRYIAVFEEKLKDLLRIVGPIPVAIDASDIVN-YRRGIMRY--CSN--YGFNHAVLLVGYGVENNVPYWILKNTWGEDWGEQGYFRVQQNINACGI 313          
The following BLAST results are available for this feature:
BLAST of CN185784 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 167
Match NameE-valueIdentityDescription
CATL1_BOVIN1.712e-1941.55Cathepsin L1 OS=Bos taurus GN=CTSL1 PE=1 SV=3[more]
CPP1_ENTHI2.236e-1940.15Cysteine proteinase 1 OS=Entamoeba histolytica GN=... [more]
CATL6_HUMAN2.236e-1942.25Putative cathepsin L-like protein 6 OS=Homo sapien... [more]
CATL1_FELCA2.236e-1942.62Cathepsin L1 (Fragment) OS=Felis catus GN=CTSL1 PE... [more]
CYSEP_VIGMU2.920e-1938.30Vignain OS=Vigna mungo PE=1 SV=1[more]
CATLL_PHACE2.920e-1935.97Cathepsin L-like proteinase OS=Phaedon cochleariae... [more]
CYSEP_RICCO6.506e-1939.72Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1[more]
CATV_NPVHZ6.506e-1932.54Viral cathepsin OS=Heliothis zea nuclear polyhedro... [more]
CYSP2_HORVU8.497e-1939.07Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=E... [more]
CATV_NPVHC8.497e-1937.30Viral cathepsin OS=Hyphantria cunea nuclear polyhe... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS05_0001N21_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001N21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185784 ID=CN185784; Name=CN185784; organism=Citrus sinensis; type=EST; length=704bp
TTTTTTTTTTTTTTTTAAGCTTCCATATAACAACTACCTTGCATTGCCAT
TTATATATAACATCGGTGGTGTCCTAGTCACAATGACTGTTTACATGGAC
ATAGATCTCAGAATTTATTTTGAACATCAAGCAGCCATGCATTGCTATTG
TAGATTATATGGACATTAATCTCCGAATTTATTTTGTACATAAAGCCAAG
CATTCTGCTATCATGCTTGAGTGAAATAATATAAGTTTTATGAGCAAATG
ACTTGCTGATAGCCAGATCCAACTATTTCTTCAGGAGCAGACTAAGCCAC
AACTGGGTATGATGCACAAGTTGCAATACCACACATGTTCTTCCCCATCT
CCATCTTAAAGTAGCCATGATCGCCCCAGTTCTCTCCCCAAGAGTTCTTA
ATCAGCCAATATGGAACGCCGTCTTCAACTCCGTACCCAACAGCAACGAC
AGCATGGTTCACATCCATGGGAGTATTTCCACATTTAGTGCTGCTGTAAA
CTCCACTCTTGTAAAATCGGAATCCATCTACTACTTCAAATGCCACACTC
ACAGGTCGAACAAGACCAACTGCATGCTGTAATTCATCTTCAGCACCCAA
GGTAATGTTGACTGAGTCCAGGACTTGGACGCCAACATTTTCAGATGAGA
ATTTGCAGACACCCTCTTTTCCGGGGGAGGGATATGCTTCCTCAGAATCA
AGGC
back to top