CN185784

Overview
NameCN185784
Unique NameCN185784
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length704
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185784 vs. ExPASy Swiss-Prot
Match: CATV_NPVST (Viral cathepsin OS=Spodoptera litura multicapsid nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.227e-17
Identity = 46/126 (36.51%), Postives = 71/126 (56.35%), Query Frame = -3
Query:  325 LDSEEAYPSPGKEGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 702
            ++ E  YP  G E  C+ +   + V++       L  E +L   +    P++VA + VD    Y+SG+  +T C +  +  NHAV+ VGYG+E+  PYW+ KNSWG NWG++GYF+     N CG+
Sbjct:  206 VEHEIDYPYQGIEYACRLAPSKLAVRLSHCYQYDLRDERKLLELLYKNGPIAVAIDCVDIID-YRSGI--ATVCNDNGL--NHAVLLVGYGIENDTPYWIFKNSWGSNWGENGYFRARRNINACGM 326          
BLAST of CN185784 vs. ExPASy Swiss-Prot
Match: CATV_NPVLD (Viral cathepsin OS=Lymantria dispar multicapsid nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.602e-17
Identity = 50/138 (36.23%), Postives = 78/138 (56.52%), Query Frame = -3
Query:  295 LDSEEAYPSPGKEGVCKFSSEN-VGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIAT-CASYPVVA 702
            + +E  YP  G+   C         V ++      +  E++L+  +  V P+ +A +  D   +Y+ GV SS  C N  +  NHAV+ VGYGVE+GVPYW+ KN+WG++WG++GYF++    N CG+    AS  V+A
Sbjct:  224 VQTELDYPFVGRNRRCGLDRHRPYVVSLVGCYRYVMVNEEKLKDLLRAVGPIPMAIDAADIVNYYR-GVISS--CENNGL--NHAVLLVGYGVENGVPYWVFKNTWGDDWGENGYFRVRQNVNACGMVNDLASTAVLA 356          
BLAST of CN185784 vs. ExPASy Swiss-Prot
Match: CATV_NPVAC (Viral cathepsin OS=Autographa californica nuclear polyhedrosis virus GN=VCATH PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.602e-17
Identity = 45/123 (36.59%), Postives = 68/123 (55.28%), Query Frame = -3
Query:  325 EEAYPSPGKEGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 693
            E  YP       C+ +S    VQV D        E++L+  + LV P+ +A +  D    YK G+     C N+ +  NHAV+ VGYGVE+ +PYW  KN+WG +WG+ G+F+++   N CG+
Sbjct:  195 ESDYPYEADNNNCRMNSNKFLVQVKDCYRYITVYEEKLKDLLRLVGPIPMAIDAADIVN-YKQGIIKY--CFNSGL--NHAVLLVGYGVENNIPYWTFKNTWGTDWGEDGFFRVQQNINACGM 312          
BLAST of CN185784 vs. ExPASy Swiss-Prot
Match: CPR4_ARATH (Probable cysteine proteinase At4g11320 OS=Arabidopsis thaliana GN=At4g11320 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.093e-17
Identity = 52/140 (37.14%), Postives = 72/140 (51.43%), Query Frame = -3
Query:  301 LDSEEAYPSPGKEGVC--KFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG----KNMCGIATCASYPV 702
            L ++  YP     GVC  +   +N  V +    N+    E  L  AV      +V       F+ Y+SGV+  T CG    ++NH VV VGYG E+G  YW++KNS G+ WG+ GY KM       + +CGIA  ASYP+
Sbjct:  224 LGTDNDYPYKALNGVCEGRLKEDNKNVMIDGYENLPANDEAALMKAVAHQPVTAVVDSSSREFQLYESGVFDGT-CGT---NLNHGVVVVGYGTENGRDYWIVKNSRGDTWGEAGYMKMARNIANPRGLCGIAMRASYPL 359          
BLAST of CN185784 vs. ExPASy Swiss-Prot
Match: XCP1_ARATH (Xylem cysteine proteinase 1 OS=Arabidopsis thaliana GN=XCP1 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.733e-17
Identity = 52/138 (37.68%), Postives = 73/138 (52.90%), Query Frame = -3
Query:  304 LDSEEAYPSPGKEGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG----KNMCGIATCASYP 702
            L  E+ YP   +EG+C+   E+V    +         +DE        +PVSVA E     F+FYK GV++  KCG    D++H V AVGYG   G  Y ++KNSWG  WG+ G+ +M+      + +CGI   ASYP
Sbjct:  218 LHKEDDYPYLMEEGICQEQKEDVERVTISGYEDVPENDDESLVKALAHQPVSVAIEASGRDFQFYKGGVFNG-KCGT---DLDHGVAAVGYGSSKGSDYVIVKNSWGPRWGEKGFIRMKRNTGKPEGLCGINKMASYP 351          
BLAST of CN185784 vs. ExPASy Swiss-Prot
Match: CATV_NPVRO (Viral cathepsin OS=Rachiplusia ou multiple nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.733e-17
Identity = 44/123 (35.77%), Postives = 68/123 (55.28%), Query Frame = -3
Query:  325 EEAYPSPGKEGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 693
            E  YP       C+ ++    VQV D        E++L+  + LV P+ +A +  D    YK G+     C N+ +  NHAV+ VGYGVE+ +PYW  KN+WG +WG+ G+F+++   N CG+
Sbjct:  195 ESDYPYEADNNNCRMNTNKFLVQVKDCYRYITVYEEKLKDLLRLVGPIPMAIDAADIVN-YKQGIIKY--CFNSGL--NHAVLLVGYGVENNIPYWTFKNTWGTDWGEEGFFRVQQNINACGM 312          
BLAST of CN185784 vs. ExPASy Swiss-Prot
Match: CATV_NPVCF (Viral cathepsin OS=Choristoneura fumiferana nuclear polyhedrosis virus GN=Vcath PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.733e-17
Identity = 45/126 (35.71%), Postives = 70/126 (55.56%), Query Frame = -3
Query:  325 LDSEEAYPSPGKEGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 702
            + +E  YP     G C+ ++    V+V          E++L+  +  V P+ VA +  D    YK G+     C N  +  NHAV+ VGY VE+GVP+W++KN+WG +WG+ GYF+++   N CGI
Sbjct:  193 IQAESDYPYEANNGDCRANAAKFVVKVKKCYRYITVFEEKLKDLLRSVGPIPVAIDASDIVN-YKRGIMKY--CANHGL--NHAVLLVGYAVENGVPFWILKNTWGADWGEQGYFRVQQNINACGI 313          
BLAST of CN185784 vs. ExPASy Swiss-Prot
Match: CATV_NPVBM (Viral cathepsin OS=Bombyx mori nuclear polyhedrosis virus GN=VCATH PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.733e-17
Identity = 44/123 (35.77%), Postives = 69/123 (56.10%), Query Frame = -3
Query:  325 EEAYPSPGKEGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 693
            E  YP       C+ +S    VQV D     +  E++L+  + LV P+ +A +  D    YK G+     C ++ +  NHAV+ VGYGVE+ +PYW  KN+WG +WG+ G+F+++   N CG+
Sbjct:  195 ESDYPYEADNNNCRMNSNKFLVQVKDCYRYIIVYEEKLKDLLPLVGPIPMAIDAADIVN-YKQGIIKY--CFDSGL--NHAVLLVGYGVENNIPYWTFKNTWGTDWGEDGFFRVQQNINACGM 312          
BLAST of CN185784 vs. ExPASy Swiss-Prot
Match: CATV_NPVEP (Viral cathepsin OS=Epiphyas postvittana nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.089e-17
Identity = 45/123 (36.59%), Postives = 64/123 (52.03%), Query Frame = -3
Query:  325 EEAYPSPGKEGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 693
            E  YP       C+       V V          E++L+  + L  P+ VA +  D    Y+ G+     C N  +  NHAV+ VGYGVE+ VPYW++KNSWG +WG+ G+FK++   N CGI
Sbjct:  195 ENDYPYESSNNYCRMDPTKFVVGVKQCNRYITIYEEKLKDVLRLAGPIPVAIDASDILN-YEQGIIKY--CANNGL--NHAVLLVGYGVENNVPYWILKNSWGTDWGEQGFFKIQQNVNACGI 312          
BLAST of CN185784 vs. ExPASy Swiss-Prot
Match: CATV_NPVAH (Viral cathepsin OS=Adoxophyes honmai nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.953e-17
Identity = 42/126 (33.33%), Postives = 66/126 (52.38%), Query Frame = -3
Query:  325 LDSEEAYPSPGKEGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 702
            L  E  YP  G +GVCK  ++   + V          E+ L+  +  + P+++A +      + K  ++     G     +NHAV+ VGYG E GV YW +KNSWG +WG+ GYF+++   N CG+
Sbjct:  206 LMEEIDYPYQGTKGVCKIDNKKFALSVSSCKRYIFQNEENLKKELITMGPIAMAIDAASISTYSKGIIHFCENLG-----LNHAVLLVGYGTEGGVSYWTLKNSWGSDWGEDGYFRVKRNINACGL 326          
The following BLAST results are available for this feature:
BLAST of CN185784 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 167
Match NameE-valueIdentityDescription
CATV_NPVST1.227e-1736.51Viral cathepsin OS=Spodoptera litura multicapsid n... [more]
CATV_NPVLD1.602e-1736.23Viral cathepsin OS=Lymantria dispar multicapsid nu... [more]
CATV_NPVAC1.602e-1736.59Viral cathepsin OS=Autographa californica nuclear ... [more]
CPR4_ARATH2.093e-1737.14Probable cysteine proteinase At4g11320 OS=Arabidop... [more]
XCP1_ARATH2.733e-1737.68Xylem cysteine proteinase 1 OS=Arabidopsis thalian... [more]
CATV_NPVRO2.733e-1735.77Viral cathepsin OS=Rachiplusia ou multiple nucleop... [more]
CATV_NPVCF2.733e-1735.71Viral cathepsin OS=Choristoneura fumiferana nuclea... [more]
CATV_NPVBM2.733e-1735.77Viral cathepsin OS=Bombyx mori nuclear polyhedrosi... [more]
CATV_NPVEP6.089e-1736.59Viral cathepsin OS=Epiphyas postvittana nucleopoly... [more]
CATV_NPVAH7.953e-1733.33Viral cathepsin OS=Adoxophyes honmai nucleopolyhed... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001N21_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001N21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185784 ID=CN185784; Name=CN185784; organism=Citrus sinensis; type=EST; length=704bp
TTTTTTTTTTTTTTTTAAGCTTCCATATAACAACTACCTTGCATTGCCAT
TTATATATAACATCGGTGGTGTCCTAGTCACAATGACTGTTTACATGGAC
ATAGATCTCAGAATTTATTTTGAACATCAAGCAGCCATGCATTGCTATTG
TAGATTATATGGACATTAATCTCCGAATTTATTTTGTACATAAAGCCAAG
CATTCTGCTATCATGCTTGAGTGAAATAATATAAGTTTTATGAGCAAATG
ACTTGCTGATAGCCAGATCCAACTATTTCTTCAGGAGCAGACTAAGCCAC
AACTGGGTATGATGCACAAGTTGCAATACCACACATGTTCTTCCCCATCT
CCATCTTAAAGTAGCCATGATCGCCCCAGTTCTCTCCCCAAGAGTTCTTA
ATCAGCCAATATGGAACGCCGTCTTCAACTCCGTACCCAACAGCAACGAC
AGCATGGTTCACATCCATGGGAGTATTTCCACATTTAGTGCTGCTGTAAA
CTCCACTCTTGTAAAATCGGAATCCATCTACTACTTCAAATGCCACACTC
ACAGGTCGAACAAGACCAACTGCATGCTGTAATTCATCTTCAGCACCCAA
GGTAATGTTGACTGAGTCCAGGACTTGGACGCCAACATTTTCAGATGAGA
ATTTGCAGACACCCTCTTTTCCGGGGGAGGGATATGCTTCCTCAGAATCA
AGGC
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