CN185770

Overview
NameCN185770
Unique NameCN185770
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length740
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2505 contig Csv1_Contig2505:1..740. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185770 vs. ExPASy Swiss-Prot
Match: ADH5_YEAST (Alcohol dehydrogenase 5 OS=Saccharomyces cerevisiae GN=ADH5 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.153e-11
Identity = 54/166 (32.53%), Postives = 83/166 (50.00%), Query Frame = 3
Query:  255 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALE-PGISCWRCDHCKGGRYNLCPEMKFFATPPVH-GSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGA 740
            L+ +   +P   P ++LV +K  G+C SD+H         F +K P++ GHE AGV+ K+GS VK    GD   ++    +C  C++C+ G  + CP +    T   H G+        A     +P NV+L E A  +C  ++V   A +RAN+ P   V I GA
Sbjct:   22 LEYKDVTVPEPKPNEILVHVKYSGVCHSDLHAWHG--DWPFQLKFPLIGGHEGAGVVVKLGSNVKGWKVGDFAGIKWLNGTCMSCEYCEVGNESQCPYLD--GTGFTHDGTFQEYATADAVQAAHIPPNVNLAEVAPILCAGITV-YKALKRANVIPGQWVTISGA 182          
BLAST of CN185770 vs. ExPASy Swiss-Prot
Match: ADH5_SACPS (Alcohol dehydrogenase 5 OS=Saccharomyces pastorianus GN=ADH5 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.153e-11
Identity = 54/166 (32.53%), Postives = 83/166 (50.00%), Query Frame = 3
Query:  255 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALE-PGISCWRCDHCKGGRYNLCPEMKFFATPPVH-GSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGA 740
            L+ +   +P   P ++LV +K  G+C SD+H         F +K P++ GHE AGV+ K+GS VK    GD   ++    +C  C++C+ G  + CP +    T   H G+        A     +P NV+L E A  +C  ++V   A +RAN+ P   V I GA
Sbjct:   22 LEYKDVTVPEPKPNEILVHVKYSGVCHSDLHAWHG--DWPFQLKFPLIGGHEGAGVVVKLGSNVKGWKVGDFAGIKWLNGTCMSCEYCEVGNESQCPYLD--GTGFTHDGTFQEYATADAVQAAHIPPNVNLAEVAPILCAGITV-YKALKRANVIPGQWVTISGA 182          
BLAST of CN185770 vs. ExPASy Swiss-Prot
Match: DOIAD_STRFR (2-deoxy-scyllo-inosamine dehydrogenase OS=Streptomyces fradiae GN=neoA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.424e-11
Identity = 46/156 (29.49%), Postives = 69/156 (44.23%), Query Frame = 3
Query:  273 ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGA 740
            ++P+  P + LVR+    +CGSD+ + K +         P+V GHE +G +  V       + G  V  +   SC  C HC  G   LC ++         G+ A  +  P      LPD + L      EPL+V L+A  R  + P   V +MGA
Sbjct:   18 DIPAPAPGEALVRVAYNSVCGSDLSFYKGVWHG---FTYPVVPGHEWSGSVVDVNGPRGADLVGRNVVGDLTCSCGTCAHCAAGTPTLCEDLGELGFTR-DGACAEYMTVPVANLRPLPDTLPLRTACQVEPLAVALNAVDRLGVTPGEKVAVMGA 169          
BLAST of CN185770 vs. ExPASy Swiss-Prot
Match: DOIAD_STRRI (2-deoxy-scyllo-inosamine dehydrogenase OS=Streptomyces ribosidificus GN=rbmC PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.084e-11
Identity = 44/156 (28.21%), Postives = 69/156 (44.23%), Query Frame = 3
Query:  273 ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGA 740
            ++P   P + LVR+    +CGSD+ + K +         P+V GHE +G +  V   +   + G  V  +  +SC  C HC      LC ++         G+ A  +  P     +LPD + L      EPL+V L+A  R  +     V +MGA
Sbjct:   18 DIPDPAPGEALVRIAYNSVCGSDLSFYKGVWHGSTY---PVVPGHEWSGTVVDVNGPLGAELIGTNVVGDLTVSCGTCAHCTARTPTLCEDLGELGFTR-DGACAEYMTIPVGNLRRLPDTLPLRAACQVEPLAVALNAVDRLGVTAGEKVAVMGA 169          
BLAST of CN185770 vs. ExPASy Swiss-Prot
Match: ADH6_RAT (Alcohol dehydrogenase 6 OS=Rattus norvegicus GN=Adh6 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.084e-11
Identity = 34/103 (33.01%), Postives = 55/103 (53.40%), Query Frame = 3
Query:  255 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT 563
            L I+  E+      +V ++M A G+CG+D+ +L T   + F    PM++GHE  G++E VG  V ++  GD+V L     C  C  C   + N+C E++   T
Sbjct:   22 LAIEEIEVAPPKAKEVRIKMVATGVCGTDIKHLDTQELSKFC---PMIMGHEGVGIVESVGEGVSSVRTGDKVILLCIPQCGECKTCLNSKNNICTEIRLSKT 121          
BLAST of CN185770 vs. ExPASy Swiss-Prot
Match: ADH1_ASPFN (Alcohol dehydrogenase 1 OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=adh1 PE=2 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 9.252e-11
Identity = 52/160 (32.50%), Postives = 77/160 (48.12%), Query Frame = 3
Query:  276 LPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADF--VVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALE-PGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGA 740
            +P  GP ++LV+++  G+C +D+H LK     D+   VK P+V GHE AGV+   G  V     GD   L+    SC  C+ CK     LCP     +   V G+     +  A    KLP NV L+  A  +C  ++V     + + + P   V I+GA
Sbjct:   26 VPKPGPDEILVKVRYSGVCHTDLHALK----GDWPLPVKMPLVGGHEGAGVVVARGDLVTEFEIGDHAGLKWLNGSCLACEFCKQADEPLCPNAS-LSGYTVDGTFQQYAIGKATHASKLPKNVPLDAVAPVLCAGITV-YKGLKESGVRPGQTVAIVGA 179          
The following BLAST results are available for this feature:
BLAST of CN185770 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 246
Match NameE-valueIdentityDescription
ADH5_YEAST4.153e-1132.53Alcohol dehydrogenase 5 OS=Saccharomyces cerevisia... [more]
ADH5_SACPS4.153e-1132.53Alcohol dehydrogenase 5 OS=Saccharomyces pastorian... [more]
DOIAD_STRFR5.424e-1129.492-deoxy-scyllo-inosamine dehydrogenase OS=Streptom... [more]
DOIAD_STRRI7.084e-1128.212-deoxy-scyllo-inosamine dehydrogenase OS=Streptom... [more]
ADH6_RAT7.084e-1133.01Alcohol dehydrogenase 6 OS=Rattus norvegicus GN=Ad... [more]
ADH1_ASPFN9.252e-1132.50Alcohol dehydrogenase 1 OS=Aspergillus flavus (str... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001N12_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001N12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185770 ID=CN185770; Name=CN185770; organism=Citrus sinensis; type=EST; length=740bp
CAGAAATCAACCATCTACGCGGATAAATACAAAGAACACTTGATGTTATT
CCTGCGGCCGAATCAAATCATATCCCATATCCAGAATCAGAATAAATGGT
AGCTTAAAATGTTGTGTACAGAGTGAAGTCTCTTCTGTGCACTTGTGTTT
TTGAAGGGTAAAAAGCAAATATGGGCAAAGGAGGGATGTCACAAGGAGAA
AAGAAGGATGGAGAAGAAGTTAACATGGCAGCTTGGCTTATGGGTGTCAA
CACCCTCAAGATTCAACCTTTTGAGCTTCCTTCTCTGGGACCATATGATG
TTTTAGTCAGGATGAAAGCCGTTGGTATTTGTGGAAGTGATGTGCATTAT
CTCAAGACCTTGAGGTGTGCCGATTTTGTTGTGAAAGAGCCTATGGTGAT
TGGGCACGAGTGTGCTGGGGTCATAGAGAAGGTGGGAAGCGAGGTGAAGA
CTTTGGTGCCCGGTGACCGTGTGGCCCTGGAACCCGGGATCAGCTGCTGG
CGATGCGATCACTGCAAAGGAGGTCGATACAATTTGTGTCCAGAGATGAA
ATTTTTTGCAACTCCGCCCGTTCATGGTTCCCTGGCTAATCAGGTGGTGC
ATCCTGCAGACCTATGTTTTAAGCTGCCGGACAATGTGAGCCTGGAGGAA
GGGGCTATGTGTGAGCCCTTGAGTGTTGGTCTTCATGCCTGCCGCCGTGC
CAATATCGGTCCTGAGACAAATGTGCTTATCATGGGAGCA
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