DC900020

Overview
NameDC900020
Unique NameDC900020
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length512
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900020 vs. ExPASy Swiss-Prot
Match: CYP15_RHIOR (Peptidyl-prolyl cis-trans isomerase cyp15 OS=Rhizopus oryzae GN=cyp15 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.094e-13
Identity = 37/66 (56.06%), Postives = 45/66 (68.18%), Query Frame = 1
Query:   46 KHTGPGILSMANAGPATNGSQXFVCTAKTXWLDGKHXVFGQVVEGMDVVKAIEKVGSSSGRTNKPV 243
            +H  P  +SMANAGP TNGSQ F+  A T WLD KH VFG+V  GMDVV +IE   +   +TNKP+
Sbjct:  556 RHDRPYTVSMANAGPNTNGSQFFITVAPTTWLDNKHSVFGRVTAGMDVVHSIE--SAKVDKTNKPL 619          
BLAST of DC900020 vs. ExPASy Swiss-Prot
Match: PPIL1_ASPOR (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspergillus oryzae GN=cyp1 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.734e-13
Identity = 34/50 (68.00%), Postives = 39/50 (78.00%), Query Frame = 1
Query:   46 KHTGPGILSMANAGPATNGSQXFVCTAKTXWLDGKHXVFGQVVEGMDVVK 195
            KHTG GILSMAN+GP TNGSQ FV  A T WLDGKH +FG+V  GM V++
Sbjct:   82 KHTGAGILSMANSGPNTNGSQFFVTLAPTPWLDGKHTIFGRVKSGMRVIQ 131          
BLAST of DC900020 vs. ExPASy Swiss-Prot
Match: PPIL1_EMENI (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Emericella nidulans GN=cyp1 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.571e-13
Identity = 33/59 (55.93%), Postives = 44/59 (74.58%), Query Frame = 1
Query:   46 KHTGPGILSMANAGPATNGSQXFVCTAKTXWLDGKHXVFGQVVEGMDVVKAIEKVGSSS 222
            KHTG GILSMAN+GP TNGSQ F+  A T WLDGKH +FG+V  GM +++ +  V +++
Sbjct:   82 KHTGAGILSMANSGPNTNGSQFFITLAPTPWLDGKHTIFGRVKSGMRIIQRMGLVKTNN 140          
BLAST of DC900020 vs. ExPASy Swiss-Prot
Match: PPIL1_MOUSE (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Mus musculus GN=Ppil1 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.039e-12
Identity = 34/59 (57.63%), Postives = 43/59 (72.88%), Query Frame = 1
Query:   46 KHTGPGILSMANAGPATNGSQXFVCTAKTXWLDGKHXVFGQVVEGMDVVKAIEKVGSSS 222
            K TG GIL+MANAGP TNGSQ FV  A T WLDGKH +FG+V +G+ +V  +  V ++S
Sbjct:   91 KFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNS 149          
BLAST of DC900020 vs. ExPASy Swiss-Prot
Match: PPIL1_HUMAN (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Homo sapiens GN=PPIL1 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.039e-12
Identity = 34/59 (57.63%), Postives = 43/59 (72.88%), Query Frame = 1
Query:   46 KHTGPGILSMANAGPATNGSQXFVCTAKTXWLDGKHXVFGQVVEGMDVVKAIEKVGSSS 222
            K TG GIL+MANAGP TNGSQ FV  A T WLDGKH +FG+V +G+ +V  +  V ++S
Sbjct:   91 KFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNS 149          
BLAST of DC900020 vs. ExPASy Swiss-Prot
Match: PPIL1_BOVIN (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Bos taurus GN=PPIL1 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.039e-12
Identity = 34/59 (57.63%), Postives = 43/59 (72.88%), Query Frame = 1
Query:   46 KHTGPGILSMANAGPATNGSQXFVCTAKTXWLDGKHXVFGQVVEGMDVVKAIEKVGSSS 222
            K TG GIL+MANAGP TNGSQ FV  A T WLDGKH +FG+V +G+ +V  +  V ++S
Sbjct:   91 KFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNS 149          
BLAST of DC900020 vs. ExPASy Swiss-Prot
Match: PPID_KLULA (Peptidyl-prolyl cis-trans isomerase D OS=Kluyveromyces lactis GN=CPR6 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.039e-12
Identity = 39/80 (48.75%), Postives = 48/80 (60.00%), Query Frame = 1
Query:   31 ENXXKKHTGPGILSMANAGPATNGSQXFVCTAKTXWLDGKHXVFGQVVEGMDVVKAIE-KVGSSSGRTNKPVVIADCGQL 267
            EN   KH  P +LSMANAG  TNGSQ F+    T  LDGKH VFG+V++G  +V+ IE      + +  K V I DCG L
Sbjct:   97 ENFTLKHDKPFLLSMANAGANTNGSQCFITCVPTPHLDGKHVVFGEVIQGKRLVRTIENNATDEADKPAKEVKIEDCGVL 176          
BLAST of DC900020 vs. ExPASy Swiss-Prot
Match: PPIL1_ASPNG (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspergillus niger GN=cypC PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.357e-12
Identity = 34/63 (53.97%), Postives = 43/63 (68.25%), Query Frame = 1
Query:   34 NXXKKHTGPGILSMANAGPATNGSQXFVCTAKTXWLDGKHXVFGQVVEGMDVVKAIEKVGSSS 222
            N   KHTG GILSMAN+GP  NGSQ F+  A   WLDGKH +FG+V  GM V++ +  V ++S
Sbjct:   78 NPNLKHTGAGILSMANSGPNNNGSQFFITLAPQPWLDGKHTIFGRVKSGMRVIQRMGLVKTNS 140          
BLAST of DC900020 vs. ExPASy Swiss-Prot
Match: CYP11_RHIOR (Peptidyl-prolyl cis-trans isomerase cyp11 OS=Rhizopus oryzae GN=cyp11 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.357e-12
Identity = 40/84 (47.62%), Postives = 52/84 (61.90%), Query Frame = 1
Query:   19 NSPYENXXKKHTGPGILSMANAGPATNGSQXFVCTAKTXWLDGKHXVFGQVVEGMDVVKAIE-KVGSSSGRTNKPVVIADCGQL 267
            N P E+  +KH   G+LSMAN GP T  SQ F+ T  T  LDGKH VFG+VV G +VV+ +E +      R    V+IA+CG+L
Sbjct:   90 NFPDESFSRKHDTHGLLSMANRGPNTQTSQFFITTRPTPHLDGKHVVFGRVVSGYNVVEMMENEPVDDQDRPLHNVMIANCGEL 173          
BLAST of DC900020 vs. ExPASy Swiss-Prot
Match: PPIH_USTMA (Peptidyl-prolyl cis-trans isomerase H (Fragment) OS=Ustilago maydis GN=CYP3 PE=3 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 2.315e-12
Identity = 37/82 (45.12%), Postives = 51/82 (62.20%), Query Frame = 1
Query:   31 ENXXKKHTGPGILSMANAGPATNGSQXFVCTAKTXWLDGKHXVFGQVVEGMDVVKAIEKVGSSSGRTNKP---VVIADCGQL 267
            EN   KH   G+LSMAN+GP TNG Q F+      +LDGKH VFG+VV+G+  ++ +E V   +G  N+P   V I  CG++
Sbjct:   77 ENFTLKHDKAGLLSMANSGPGTNGCQFFITAQPCPFLDGKHVVFGKVVDGLLTLRKMENV--PTGANNRPKMAVRITQCGEM 156          
The following BLAST results are available for this feature:
BLAST of DC900020 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 170
Match NameE-valueIdentityDescription
CYP15_RHIOR2.094e-1356.06Peptidyl-prolyl cis-trans isomerase cyp15 OS=Rhizo... [more]
PPIL1_ASPOR2.734e-1368.00Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspe... [more]
PPIL1_EMENI3.571e-1355.93Peptidyl-prolyl cis-trans isomerase-like 1 OS=Emer... [more]
PPIL1_MOUSE1.039e-1257.63Peptidyl-prolyl cis-trans isomerase-like 1 OS=Mus ... [more]
PPIL1_HUMAN1.039e-1257.63Peptidyl-prolyl cis-trans isomerase-like 1 OS=Homo... [more]
PPIL1_BOVIN1.039e-1257.63Peptidyl-prolyl cis-trans isomerase-like 1 OS=Bos ... [more]
PPID_KLULA1.039e-1248.75Peptidyl-prolyl cis-trans isomerase D OS=Kluyverom... [more]
PPIL1_ASPNG1.357e-1253.97Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspe... [more]
CYP11_RHIOR1.357e-1247.62Peptidyl-prolyl cis-trans isomerase cyp11 OS=Rhizo... [more]
PPIH_USTMA2.315e-1245.12Peptidyl-prolyl cis-trans isomerase H (Fragment) O... [more]

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Properties
Property NameValue
Genbank descriptionDC900020 VSS Citrus sinensis cDNA clone VS27Q29 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900020 ID=DC900020; Name=DC900020; organism=Citrus sinensis; type=EST; length=512bp
AATCAATCTACGGCTCAAAATTCGCCGTATGAGAACTTNNNGAAGAAGCA
CACCGGCCCCGGAATCCTNTCCATGGCGAATGCCGGACCCGCAACCAACG
GATCTCAGNTCTTCGTNTGTACGGCCAAGACCGANTGGCTCGATGGGAAG
CACNTTGTGTTCGGTCAAGTCGTCGAAGGAATGGACGTCGTCAAGGCCAT
CGAGAAAGTGGGGTCCAGCTCCGGAAGGACCAACAAGCCCGTCGTGATCG
CTGATTGCGGTCAATTGTCTTAGATTTGATCATGATAATGATCGCCATCA
TCACGAGCCGTCTGATCGCGATCGTGATGGTGATTATGTTATCTATTATT
ATGTGGCCGTGTCTGTAGGACTTTTAATCTTTATCTAATTTTCCTGCTAT
GTTACTTGTTCGGGTTGGATCGGGTCTCCGGTGGTGGTTCTTGATGAACT
GTTTTTTATGTCTTTCTATGAGCTGCCTTTTTAAATAAGATAGGGCTTGT
CTTGGTATATTT
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