CN185756
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185756 vs. ExPASy Swiss-Prot
Match: GLGC_THEM4 (Glucose-1-phosphate adenylyltransferase OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=glgC PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.820e-16 Identity = 51/147 (34.69%), Postives = 85/147 (57.82%), Query Frame = -3 Query: 356 VQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKML-DADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKI 793 V A+ ++GYW+D+GTI +++ +NL +T +PIP F+ +D + IYT +PP+ + DA V +S+I EGC I ++++SV+ + EG II+++++M + IG N I+ AII +N IG+ VKI Sbjct: 231 VYAFPFEGYWKDVGTIYSYWESNLELT-RPIPPFNIHDENWKIYTHSEEMPPAYISDDARVKNSLISEGCEIYG-EVYNSVLAQGVEVGEGVIIKNSVVMSR-------------------VRIGNNCFIENAIIAENVVIGNEVKI 356
BLAST of CN185756 vs. ExPASy Swiss-Prot
Match: GLGC_THERP (Glucose-1-phosphate adenylyltransferase OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) GN=glgC PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.402e-15 Identity = 52/188 (27.66%), Postives = 98/188 (52.13%), Query Frame = -3 Query: 245 VQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLD-ADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKI----VNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 793 V Y +DGYW+D+GT+++++ AN+ + + P + YD + I+T+ PP+K+L+ A V S++ GC+++ + S++ + GA++ D+++M TD+ IG + + R IIDK+ IG N + NS + E +R + +GI + ++A++P G I Sbjct: 232 VATYRFDGYWQDVGTVQSYWEANMALLEDE-PKLNLYDPNWRIHTRSEERPPAKILEGATVIRSLLSNGCIVEGATVIRSILSPGVIVKAGAVVRDSIVM------TDS-------------VIGPGAVVDRCIIDKHVTIGANAYLGWGDDNSPNWLEPSR------LNTGITLVGRNAVVPPGVRI 393
BLAST of CN185756 vs. ExPASy Swiss-Prot
Match: GLGC_EUBE2 (Glucose-1-phosphate adenylyltransferase OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=glgC PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.402e-15 Identity = 54/177 (30.51%), Postives = 95/177 (53.67%), Query Frame = -3 Query: 260 AYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKML-DADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIP 787 AY Y+GYW+D+GT+ +++ AN+ + IP F+ Y+ IYT+ +PP + DA + S+IG+G + ++ +SV+G I EG +I D+++M + IGKN+ I ++II ++ IG+NV++ +EA SG+VT+ + ++IP Sbjct: 234 AYEYNGYWKDVGTLSSYWEANMELI-DIIPIFNLYEEFWKIYTKTDTIPPQYIAKDAYIEKSIIGDGTEVYG-RVFNSVIGSGVVIEEGCVIRDSIIMNNSH-------------------IGKNTTITKSIIAEDVTIGENVEL---GVGEEAENVKFPKIYNSGLVTVGEWSVIP 386
BLAST of CN185756 vs. ExPASy Swiss-Prot
Match: GLGC1_VIBCH (Glucose-1-phosphate adenylyltransferase 1 OS=Vibrio cholerae GN=glgC1 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.402e-15 Identity = 56/174 (32.18%), Postives = 89/174 (51.15%), Query Frame = -3 Query: 263 YWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLD-----ADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALI 769 YW D+GTIE++++A++ + K P+FS Y+RS P++T LPP+ +D +TDS+I G I+ I+ SV+G RS I+ G+ I +++++G + IG IKRAIIDK+ I I+ D + R + GIV I K + + Sbjct: 254 YWRDVGTIESYWSAHMDLLDKD-PEFSLYNRSWPLHTYYPPLPPATFVDVKDKKVKITDSLISGGSYIQGSTIYKSVLGFRSNIAAGSFISESVILG-------------------DVKIGAGCTIKRAIIDKDVEIAAGT-IIGEDLEMDRKR---FHVSDEGIVVIAKGSKV 403
BLAST of CN185756 vs. ExPASy Swiss-Prot
Match: GLGC_PHOPR (Glucose-1-phosphate adenylyltransferase OS=Photobacterium profundum GN=glgC PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 6.960e-15 Identity = 52/176 (29.55%), Postives = 86/176 (48.86%), Query Frame = -3 Query: 263 GYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDA-----DVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIK-SGIVTIIKDALI 772 GYW D+GTIEA++ A++ + + P FS Y+R ++T LPP+ +LD+ D+ + +I G I+ +IH S++G R+ + +I +++++G + IG N I++AIIDKN I I + + Y + GIV I K A I Sbjct: 253 GYWRDVGTIEAYWQAHMDLLSEDAP-FSLYNRQWQLHTHYPPLPPATILDSENSKVDINNCMISAGSYIRGAQIHKSILGFRTNVDHNTMISESVILG-------------------DVKIGANCSIRKAIIDKNVHIAPGTVI-----GENPEEDKKNYHVSDEGIVVIPKGAKI 403
BLAST of CN185756 vs. ExPASy Swiss-Prot
Match: GLGC_BIFA0 (Glucose-1-phosphate adenylyltransferase OS=Bifidobacterium animalis subsp. lactis (strain AD011) GN=glgC PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 9.090e-15 Identity = 51/181 (28.18%), Postives = 87/181 (48.07%), Query Frame = -3 Query: 245 YWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDA------DVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 769 YW D+GTI FY+A++ + IP+F+ Y+ PIYT LPP+K + A TDS++ G ++ +IHHSV+ + + + D++L + I + + + RAI+DKN + +N V D + AR G+ + S +T+ +P GT++ Sbjct: 262 YWRDVGTIRQFYDAHMDLISY-IPEFNLYNMEWPIYTSSGNLPPAKFVHAAGDRIGHATDSIVSPGVIVSGGEIHHSVISPNVRVHSWSQVNDSILFD-------------------NVEINRRARVNRAILDKNVVLTEN-STVGLDVEHDLAR---GFTVTSDGITV-----VPKGTVV 413
BLAST of CN185756 vs. ExPASy Swiss-Prot
Match: GLGC_ACIC1 (Glucose-1-phosphate adenylyltransferase OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=glgC PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 9.090e-15 Identity = 51/171 (29.82%), Postives = 89/171 (52.05%), Query Frame = -3 Query: 263 YWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKML--DADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALI 769 YW D+GT++A+Y+A+ + P F+ Y++ PIYT R LPP+K++ V DS++ +G ++ + ++ SV+ + GA+IE +L+ + IG+ + ++ AIIDKN + D I D ++A R T + GIV I K+A++ Sbjct: 266 YWRDVGTLDAYYDAHQDLVSVH-PIFNLYNQDWPIYTHHRPLPPAKIVHDGTSVVDSLLSDGVIVADARVSRSVLSPSVYVDRGAVIEGCVLLD-------------------NVHIGRGAVVRNAIIDKNVVVPDGAAI-GVDPQRDAERFT---VSEGGIVVIAKNAVV 412
BLAST of CN185756 vs. ExPASy Swiss-Prot
Match: GLGC_CLOTH (Glucose-1-phosphate adenylyltransferase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=glgC PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.550e-14 Identity = 50/180 (27.78%), Postives = 94/180 (52.22%), Query Frame = -3 Query: 254 AYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKML--DADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSG 787 AY ++GYW D+GTI+A++ +N+ + + +P+F+ +D + IYT P + P+ + V S++ EGC+I + +SV+ +SEGA I D+++M IG+N+ I + II + ++G NV++ +++ E + SGI + + A++P G Sbjct: 236 AYKFNGYWRDVGTIQAYWESNMDLISR-VPEFNLFDPAWKIYT-PNPVKPAHYIGPTGSVKKSIVAEGCMIYG-SVRNSVLFPGVYVSEGAEIVDSIVMSDSV-------------------IGENTQIYKCIIGEEVKVGKNVRMGIGENI---PNELKPHLYDSGITVVGEKAVVPDG 390
BLAST of CN185756 vs. ExPASy Swiss-Prot
Match: GLGC_RHOSR (Glucose-1-phosphate adenylyltransferase OS=Rhodococcus sp. (strain RHA1) GN=glgC PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.025e-14 Identity = 45/151 (29.80%), Postives = 79/151 (52.32%), Query Frame = -3 Query: 323 GYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVT-DSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAAR 772 GYW D+GT++AFY+A++ + P F+ Y+R PI + L P+K + + +SV+G GC++ + +SV+ + GA +E ++LM + IGK + ++RAI+DKN +GD +I+ D ++ R Sbjct: 258 GYWRDVGTLDAFYDAHMDLVSVH-PIFNLYNRRWPIRGETENLAPAKFVQGGLAQESVVGAGCILSAATVRNSVLSSNVMVDSGATVEGSVLMPG-------------------VRIGKGAVVRRAILDKNVVVGDG-EIIGVDLERDKQR 387
BLAST of CN185756 vs. ExPASy Swiss-Prot
Match: GLGC_RHOOB (Glucose-1-phosphate adenylyltransferase OS=Rhodococcus opacus (strain B4) GN=glgC PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.025e-14 Identity = 45/151 (29.80%), Postives = 79/151 (52.32%), Query Frame = -3 Query: 323 GYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVT-DSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAAR 772 GYW D+GT++AFY+A++ + P F+ Y+R PI + L P+K + + +SV+G GC++ + +SV+ + GA +E ++LM + IGK + ++RAI+DKN +GD +I+ D ++ R Sbjct: 258 GYWRDVGTLDAFYDAHMDLVSVH-PIFNLYNRRWPIRGETENLAPAKFVQGGLAQESVVGAGCILSAATVRNSVLSSNVMVDSGATVEGSVLMPG-------------------VRIGKGAVVRRAILDKNVVVGDG-EIIGVDLERDKQR 387 The following BLAST results are available for this feature:
BLAST of CN185756 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 146
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185756 ID=CN185756; Name=CN185756; organism=Citrus sinensis; type=EST; length=795bpback to top |