CN185756

Overview
NameCN185756
Unique NameCN185756
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length795
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185756 vs. ExPASy Swiss-Prot
Match: GLGC_STRP7 (Glucose-1-phosphate adenylyltransferase OS=Streptococcus pneumoniae (strain 70585) GN=glgC PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.475e-12
Identity = 50/154 (32.47%), Postives = 81/154 (52.60%), Query Frame = -3
Query:  335 VQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKM-LDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQ 793
            V AY + GYW+D+GTIE+ + AN+     P       +R   IY++    PP+ +  +A V DS++ +GC +    + HS++   + + EGA I D+++M                 G++   IG+ + IKRAII + A I D V+I  +D VQ
Sbjct:  233 VYAYEFSGYWKDVGTIESLWEANMEYI-SPENALDSRNRQWKIYSRNLISPPNFLGANAHVEDSLVVDGCFVDG-TVKHSILSTGAQVREGAEILDSVIM----------------SGAI---IGQGAKIKRAIIGEGAIISDGVEIDGTDEVQ 365          
BLAST of CN185756 vs. ExPASy Swiss-Prot
Match: GLGC_STRP4 (Glucose-1-phosphate adenylyltransferase OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=glgC PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.475e-12
Identity = 49/154 (31.82%), Postives = 81/154 (52.60%), Query Frame = -3
Query:  335 VQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKM-LDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQ 793
            V AY + GYW+D+GTIE+ + AN+     P       +R   IY++    PP+ +  +A V DS++ +GC +    + HS++   + + EGA + D+++M                 G++   IG+ + IKRAII + A I D V+I  +D VQ
Sbjct:  233 VYAYEFSGYWKDVGTIESLWEANMEYI-SPENALDSRNRQWKIYSRNLISPPNFLGANAHVEDSLVVDGCFVDGA-VKHSILSTGAQVREGAEVLDSVIM----------------SGAI---IGQGAKIKRAIIGEGAIISDGVEIDGTDEVQ 365          
BLAST of CN185756 vs. ExPASy Swiss-Prot
Match: GLGC_STRZT (Glucose-1-phosphate adenylyltransferase OS=Streptococcus pneumoniae (strain Taiwan19F-14) GN=glgC PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.233e-12
Identity = 49/154 (31.82%), Postives = 81/154 (52.60%), Query Frame = -3
Query:  335 VQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKM-LDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQ 793
            V AY + GYW+D+GTIE+ + AN+     P       +R   IY++    PP+ +  +A V DS++ +GC +    + HS++   + + EGA + D+++M                 G++   IG+ + IKRAII + A I D V+I  +D VQ
Sbjct:  233 VYAYEFSGYWKDVGTIESLWEANMEYI-SPENALDSRNRQWKIYSRNLISPPNFLGANAHVEDSLVVDGCFVDG-TVKHSILSTGAQVREGAEVLDSVIM----------------SGAI---IGQGAKIKRAIIGEGAIISDGVEIDGTDEVQ 365          
BLAST of CN185756 vs. ExPASy Swiss-Prot
Match: GLGC_STRZP (Glucose-1-phosphate adenylyltransferase OS=Streptococcus pneumoniae (strain P1031) GN=glgC PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.233e-12
Identity = 49/154 (31.82%), Postives = 81/154 (52.60%), Query Frame = -3
Query:  335 VQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKM-LDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQ 793
            V AY + GYW+D+GTIE+ + AN+     P       +R   IY++    PP+ +  +A V DS++ +GC +    + HS++   + + EGA + D+++M                 G++   IG+ + IKRAII + A I D V+I  +D VQ
Sbjct:  233 VYAYEFSGYWKDVGTIESLWEANMEYI-SPENALDSRNRQWKIYSRNLISPPNFLGANAHVEDSLVVDGCFVDG-TVKHSILSTGAQVREGAEVLDSVIM----------------SGAI---IGQGAKIKRAIIGEGAIISDGVEIDGTDEVQ 365          
BLAST of CN185756 vs. ExPASy Swiss-Prot
Match: GLGC_STRZJ (Glucose-1-phosphate adenylyltransferase OS=Streptococcus pneumoniae (strain JJA) GN=glgC PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.233e-12
Identity = 49/154 (31.82%), Postives = 81/154 (52.60%), Query Frame = -3
Query:  335 VQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKM-LDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQ 793
            V AY + GYW+D+GTIE+ + AN+     P       +R   IY++    PP+ +  +A V DS++ +GC +    + HS++   + + EGA + D+++M                 G++   IG+ + IKRAII + A I D V+I  +D VQ
Sbjct:  233 VYAYEFSGYWKDVGTIESLWEANMEYI-SPENALDSRNRQWKIYSRNLISPPNFLGANAHVEDSLVVDGCFVDG-TVKHSILSTGAQVREGAEVLDSVIM----------------SGAI---IGQGAKIKRAIIGEGAIISDGVEIDGTDEVQ 365          
BLAST of CN185756 vs. ExPASy Swiss-Prot
Match: GLGC_STRSV (Glucose-1-phosphate adenylyltransferase OS=Streptococcus sanguinis (strain SK36) GN=glgC PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.233e-12
Identity = 48/153 (31.37%), Postives = 83/153 (54.25%), Query Frame = -3
Query:  338 VQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLD-ADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSV 793
            V AY + GYW+D+GT+E+ + AN+     P       +R   IY++    PP+ + + + V DS++ +GC +    + HS++   + + +GA+IED+++M                 G+V   IGK++ IKRAII + A I D V+I  ++ V
Sbjct:  233 VYAYDFAGYWKDVGTVESLWEANMEYI-SPENALDSRNRRWKIYSRNLISPPNFISENSHVEDSLVVDGCFVDG-TVKHSILSTGAQVKKGAVIEDSVIM----------------SGAV---IGKDAKIKRAIIGEGAIISDGVEIDGTEEV 364          
BLAST of CN185756 vs. ExPASy Swiss-Prot
Match: GLGC_STRS7 (Glucose-1-phosphate adenylyltransferase OS=Streptococcus equi subsp. zooepidemicus (strain H70) GN=glgC PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.233e-12
Identity = 49/154 (31.82%), Postives = 79/154 (51.30%), Query Frame = -3
Query:  335 VQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKML-DADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQ 793
            V  Y + GYW+D+GTIE+ + AN+    +        DRS  IY++    PP+ +  DA+V DS++ +G  I   K++HS++     + +GA ++D+ +M                     + IG+ + I RAII + A IGD+V I  S  VQ
Sbjct:  233 VYTYNFKGYWKDVGTIESLWEANMEYIGEE-NALDSRDRSWKIYSKNHIAPPNFITEDAEVKDSLVVDGSFISG-KVNHSILSTNVQVRKGAEVKDSFIMS-------------------DVIIGEGARITRAIIGEGAVIGDHVVIDGSKDVQ 365          
BLAST of CN185756 vs. ExPASy Swiss-Prot
Match: GLGC_STRPS (Glucose-1-phosphate adenylyltransferase OS=Streptococcus pneumoniae (strain CGSP14) GN=glgC PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.233e-12
Identity = 49/154 (31.82%), Postives = 81/154 (52.60%), Query Frame = -3
Query:  335 VQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKM-LDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQ 793
            V AY + GYW+D+GTIE+ + AN+     P       +R   IY++    PP+ +  +A V DS++ +GC +    + HS++   + + EGA + D+++M                 G++   IG+ + IKRAII + A I D V+I  +D VQ
Sbjct:  233 VYAYEFSGYWKDVGTIESLWEANMEYI-SPENALDSRNRQWKIYSRNLISPPNFLGANAHVEDSLVVDGCFVDG-TVKHSILSTGAQVREGAEVLDSVIM----------------SGAI---IGQGAKIKRAIIGEGAIISDGVEIDGTDEVQ 365          
BLAST of CN185756 vs. ExPASy Swiss-Prot
Match: GLGC_STRPN (Glucose-1-phosphate adenylyltransferase OS=Streptococcus pneumoniae GN=glgC PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.233e-12
Identity = 49/154 (31.82%), Postives = 81/154 (52.60%), Query Frame = -3
Query:  335 VQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKM-LDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQ 793
            V AY + GYW+D+GTIE+ + AN+     P       +R   IY++    PP+ +  +A V DS++ +GC +    + HS++   + + EGA + D+++M                 G++   IG+ + IKRAII + A I D V+I  +D VQ
Sbjct:  233 VYAYEFSGYWKDVGTIESLWEANMEYI-SPENALDSRNRQWKIYSRNLISPPNFLGANAHVEDSLVVDGCFVDG-TVKHSILSTGAQVREGAEVLDSVIM----------------SGAI---IGQGAKIKRAIIGEGAIISDGVEIDGTDEVQ 365          
BLAST of CN185756 vs. ExPASy Swiss-Prot
Match: GLGC_STRPJ (Glucose-1-phosphate adenylyltransferase OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=glgC PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.233e-12
Identity = 49/154 (31.82%), Postives = 81/154 (52.60%), Query Frame = -3
Query:  335 VQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKM-LDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQ 793
            V AY + GYW+D+GTIE+ + AN+     P       +R   IY++    PP+ +  +A V DS++ +GC +    + HS++   + + EGA + D+++M                 G++   IG+ + IKRAII + A I D V+I  +D VQ
Sbjct:  233 VYAYEFSGYWKDVGTIESLWEANMEYI-SPENALDSRNRQWKIYSRNLISPPNFLGANAHVEDSLVVDGCFVDG-TVKHSILSTGAQVREGAEVLDSVIM----------------SGAI---IGQGAKIKRAIIGEGAIISDGVEIDGTDEVQ 365          
The following BLAST results are available for this feature:
BLAST of CN185756 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
GLGC_STRP72.475e-1232.47Glucose-1-phosphate adenylyltransferase OS=Strepto... [more]
GLGC_STRP42.475e-1231.82Glucose-1-phosphate adenylyltransferase OS=Strepto... [more]
GLGC_STRZT3.233e-1231.82Glucose-1-phosphate adenylyltransferase OS=Strepto... [more]
GLGC_STRZP3.233e-1231.82Glucose-1-phosphate adenylyltransferase OS=Strepto... [more]
GLGC_STRZJ3.233e-1231.82Glucose-1-phosphate adenylyltransferase OS=Strepto... [more]
GLGC_STRSV3.233e-1231.37Glucose-1-phosphate adenylyltransferase OS=Strepto... [more]
GLGC_STRS73.233e-1231.82Glucose-1-phosphate adenylyltransferase OS=Strepto... [more]
GLGC_STRPS3.233e-1231.82Glucose-1-phosphate adenylyltransferase OS=Strepto... [more]
GLGC_STRPN3.233e-1231.82Glucose-1-phosphate adenylyltransferase OS=Strepto... [more]
GLGC_STRPJ3.233e-1231.82Glucose-1-phosphate adenylyltransferase OS=Strepto... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001N05_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001N05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185756 ID=CN185756; Name=CN185756; organism=Citrus sinensis; type=EST; length=795bp
GAGGTTTTTTTTTAGAATGAAAGATTTTATTTCTGCATAACTAGACCTTT
ACAGCATGTCCCTTTTTCCAGGTCCTATATTCCTCTCATAATTACATTAC
ACTGCCCGGAAATATACAGCTTATAGCAAAAAGATGGCCAAAGGTAAAGT
GGAAGCAGACTTGAGATTACGACATTCTCGAGCATAGAGGGGAAGGTACC
CGCAGCAGCGCAGCTTGGGATGAAACTGAGAAGACGACAGTTTAGATTAT
GGTTCCACTGGGAATCAAGGCATCCTTGATTATTGTGACAATCCCGCTCT
TGATGAAGTATCCATCTGTTTCCCTTGCTGCTTCTTGCACACTGTCACTG
TTGACGATCTTCACATTATCCCCAATTCGAGCATTTTTGTCAATTATTGC
TCTCTTGATGTGAGAATTCTTGCCAATACCAATTGGAACACTACCCTTTG
CAGCCAAAAACCTCCTGTCCGCGTCTGTCTCATAATAATCTGCTCCCATA
AGTAAAGTATCTTCGATAATTGCACCTTCTGATATGCAAGATCGAAGCCC
AACAACAGAATGGTGAATTTTGCAATTCTTAATCACACAGCCTTCACCAA
TTACACTATCAGTGACATCAGCATCAAGCATCTTAGAAGGAGGTAGATAT
CTAGGCTGTGTATAAATTGGAGCAGAACGGTCATAGAAGCTGAAATCCGG
AATTGGCTTTTTGGTGATCCCCAGATTCGCATTGTAGAAAGCCTCAATTG
TTCCAATGTCTTCCCAGTAGCCATCATATAAATATGCTTGCACTC
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