CN185745

Overview
NameCN185745
Unique NameCN185745
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length629
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6751 contig Csv1_Contig6751:507..1135. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185745 vs. ExPASy Swiss-Prot
Match: ILVB_CRYNV (Acetolactate synthase, mitochondrial OS=Cryptococcus neoformans var. grubii GN=ILV2 PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.599e-18
Identity = 51/136 (37.50%), Postives = 77/136 (56.62%), Query Frame = -1
Query:  228 ANPDAIIVDIDGDGSFIMNVQELATIKVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLRAAIQTMLDTPG--PYLLDVIVPHQEHVLPMIPSGGAFKD 629
            A P+  ++DIDGD SF M   ELAT     + +K+LL NN+  GMV QW+D FY+   +HT + +        P+ +K +E+ G  G + T+  DL   ++  L+  G  P +L+ +V   EHV PMIP+G A  +
Sbjct:  580 AAPEKYVIDIDGDASFSMTAMELATASQYDIGVKVLLFNNEFQGMVEQWQDLFYENRYSHTRMTN--------PDFVKLSESMGAKGLRCTKLEDLPRMMKEFLEYDGKRPIVLECLV-SSEHVYPMIPAGKALHE 706          
BLAST of CN185745 vs. ExPASy Swiss-Prot
Match: ILVB_CRYNE (Acetolactate synthase, mitochondrial OS=Cryptococcus neoformans GN=ILV2 PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.599e-18
Identity = 51/136 (37.50%), Postives = 77/136 (56.62%), Query Frame = -1
Query:  228 ANPDAIIVDIDGDGSFIMNVQELATIKVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLRAAIQTMLDTPG--PYLLDVIVPHQEHVLPMIPSGGAFKD 629
            A P+  ++DIDGD SF M   ELAT     + +K+LL NN+  GMV QW+D FY+   +HT + +        P+ +K +E+ G  G + T+  DL   ++  L+  G  P +L+ +V   EHV PMIP+G A  +
Sbjct:  580 AAPEKYVIDIDGDASFSMTAMELATASQYDIGVKVLLFNNEFQGMVEQWQDLFYENRYSHTRMTN--------PDFVKLSESMGTKGLRCTKLEDLPRMMKEFLEYDGKRPIVLECLV-SSEHVYPMIPAGKALHE 706          
BLAST of CN185745 vs. ExPASy Swiss-Prot
Match: ILVB_BACSU (Acetolactate synthase large subunit OS=Bacillus subtilis GN=ilvB PE=1 SV=4)

HSP 1 Score: 88.9669 bits (219), Expect = 2.200e-17
Identity = 45/136 (33.09%), Postives = 77/136 (56.62%), Query Frame = -1
Query:  222 ANPDAIIVDIDGDGSFIMNVQELATIKVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLRAAIQTMLDTPGPYLLDVIVPHQEHVLPMIPSGGAFKDVI 629
            A  DA +V + GDG F M +QEL  I+   LP+K+++LNN  LGMV QW++ FY+   + +            P+ +K +EA GI G +++ +A+ +  ++  L +  P ++DV V  +E V PM+  G    +++
Sbjct:  442 AEKDATVVAVVGDGGFQMTLQELDVIRELNLPVKVVILNNACLGMVRQWQEIFYEERYSESKFASQ-------PDFVKLSEAYGIKGIRISSEAEAKEKLEEALTSREPVVIDVRVASEEKVFPMVAPGKGLHEMV 570          
BLAST of CN185745 vs. ExPASy Swiss-Prot
Match: ILVI_HAEIN (Acetolactate synthase large subunit OS=Haemophilus influenzae GN=ilvI PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 8.362e-17
Identity = 47/137 (34.31%), Postives = 71/137 (51.82%), Query Frame = -1
Query:  222 ANPDAIIVDIDGDGSFIMNVQELATIKVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLRAAIQTMLDTPGPYL-LDVIVPHQEHVLPMIPSGGAFKDVI 629
            A+P+  +V + GDGS  MN+QEL+T     +P+ I+ LNN  LGMV QW+D  Y    + TY+          P+  K AE+ G  G ++    +L + +Q         + +D+ V   EHV PM   GGA  ++I
Sbjct:  435 AHPEGTVVCVTGDGSIQMNIQELSTATQYGIPVVIICLNNHFLGMVKQWQDLIYSGRHSQTYMNS-------LPDFAKLAESYGHVGIKIATPDELESKLQEAFSIKNKLVFVDINVDESEHVYPMQIRGGAMNEMI 564          
BLAST of CN185745 vs. ExPASy Swiss-Prot
Match: ILVB_CORGL (Acetolactate synthase large subunit OS=Corynebacterium glutamicum GN=ilvB PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 8.362e-17
Identity = 50/134 (37.31%), Postives = 72/134 (53.73%), Query Frame = -1
Query:  225 PDAIIVDIDGDGSFIMNVQELATIKVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLRAAIQTMLD-TPGPYLLDVIVPHQEHVLPMIPSGGAFKDV 623
            PD  +  IDGDG F M  QEL T  VE  PIKI L+NN +LGMV QW+  FY+   ++T L     + E  P+ +  +E  G    +VT+  ++  AIQ   +    P ++D IV     V PM+ +G +  D+
Sbjct:  457 PDKEVWAIDGDGCFQMTNQELTTAAVEGFPIKIALINNGNLGMVRQWQTLFYEGRYSNTKL---RNQGEYMPDFVTLSEGLGCVAIRVTKAEEVLPAIQKAREINDRPVVIDFIVGEDAQVWPMVSAGSSNSDI 587          
BLAST of CN185745 vs. ExPASy Swiss-Prot
Match: ILVI_SALTY (Acetolactate synthase isozyme 3 large subunit OS=Salmonella typhimurium GN=ilvI PE=3 SV=3)

HSP 1 Score: 85.8853 bits (211), Expect = 1.863e-16
Identity = 50/146 (34.25%), Postives = 76/146 (52.05%), Query Frame = -1
Query:  201 ANPDAIIVDIDGDGSFIMNVQELATIKVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLRAAIQTMLD---TPGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGRT 629
            A P  ++V + GDGS  MN+QEL+T    +LP+ +L LNN++LGMV QW+D  Y    + +Y+       +  P+ ++ AEA G  G Q+ R  +L + +   L+         +DV V   EHV PM   GG   ++      RT
Sbjct:  436 ALPKEMVVCVTGDGSIQMNIQELSTALQYELPVLVLNLNNRYLGMVKQWQDMIYSGRHSQSYM-------QSLPDFVRLAEAYGHVGLQINRPDELESKLSEALEHVRNNRLVFVDVTVDGSEHVYPMQIRGGGMDEMWLSKTERT 574          
BLAST of CN185745 vs. ExPASy Swiss-Prot
Match: ILVI_BUCSC (Acetolactate synthase large subunit OS=Buchnera aphidicola subsp. Schlechtendalia chinensis GN=ilvI PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.433e-16
Identity = 48/145 (33.10%), Postives = 75/145 (51.72%), Query Frame = -1
Query:  204 ANPDAIIVDIDGDGSFIMNVQELATIKVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLRAAIQTMLD---TPGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGR 629
            A P+  ++ + GDGS  MN+QEL+T    +LPI IL LNN+ LGMV QW+D  Y    +H+Y+       +  PN +K AE+ G  G  +    +L   +Q  L+         +D+ +   EHV PM    G   +++   +G+
Sbjct:  436 AFPNETVICVTGDGSIQMNIQELSTAMQYELPILILNLNNKSLGMVKQWQDIIYSGRHSHSYM-------KSLPNFIKLAESYGHSGISINTPKELEKKLQLALEKLQNGHLVFVDIKIDASEHVYPMQIRDGGMNNMLLRKNGQ 573          
BLAST of CN185745 vs. ExPASy Swiss-Prot
Match: ILVI_BUCBP (Acetolactate synthase large subunit OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=ilvI PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.150e-16
Identity = 52/134 (38.81%), Postives = 71/134 (52.99%), Query Frame = -1
Query:  240 ANPDAIIVDIDGDGSFIMNVQELATIKVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLRAAIQ---TMLDTPGPYLLDVIVPHQEHVLPM-IPSGG 629
            A P   ++ I GDGS  MN+QEL+T    KL I IL LNN+ LGMV QW+D  Y    +H+Y+       +  PN +K AE+ G  G  +    DL   ++     LD      +D+ +  +EHV PM I SGG
Sbjct:  436 ALPKETVLCITGDGSIQMNIQELSTAMQYKLSILILNLNNRSLGMVKQWQDIIYSGRHSHSYM-------KSLPNFIKLAESYGHIGISIHNPEDLEKKLKLALLKLDQGNLVFVDITIDPEEHVYPMQIRSGG 562          
BLAST of CN185745 vs. ExPASy Swiss-Prot
Match: ILVB_SYNPX (Acetolactate synthase large subunit OS=Synechococcus sp. (strain WH8102) GN=ilvB PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 7.078e-16
Identity = 44/129 (34.11%), Postives = 69/129 (53.49%), Query Frame = -1
Query:  243 ANPDAIIVDIDGDGSFIMNVQELATIKVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLRAAIQTMLDTPGPYLLDVIVPHQEHVLPMIPSG 629
            A PD  +V I GD S +MN+QEL T+    LP+K++++NN   GMV QW++ FY    +       S      P+ +  A + G+ G ++T +  L   +   L +P P ++DV V   E+  PM+P G
Sbjct:  451 AMPDRQVVCIAGDASILMNIQELGTLAAYGLPVKVVIVNNHWQGMVRQWQESFYDERYS------ASDMLNGMPDFIALARSFGVDGVKITDRELLHRDLAAALQSPTPTMIDVHVRRGENCYPMVPPG 573          
BLAST of CN185745 vs. ExPASy Swiss-Prot
Match: ILVB_MYCLE (Acetolactate synthase OS=Mycobacterium leprae GN=ilvB PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 7.078e-16
Identity = 51/136 (37.50%), Postives = 73/136 (53.68%), Query Frame = -1
Query:  225 ANPDAIIVDIDGDGSFIMNVQELATIKVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLRAAI-QTMLDTPGPYLLDVIVPHQEHVLPMIPSGGAFKDV 629
            A P+A +  IDGDG F M  QELAT  +E  PIK+ L+NN +LGMV QW+  FY+   + T   D +  S   P+ +K AEA G  G +   + D+   I Q       P ++D IV     V PM+ +G +  ++
Sbjct:  475 ARPEAEVWAIDGDGCFQMTNQELATCAIEGAPIKVALINNGNLGMVRQWQALFYQERYSQT---DLATHSHRIPDFVKLAEALGCVGLRCECEEDVVDVINQARAINNRPVVIDFIVGADAQVWPMVAAGASNDEI 607          
The following BLAST results are available for this feature:
BLAST of CN185745 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
ILVB_CRYNV2.599e-1837.50Acetolactate synthase, mitochondrial OS=Cryptococc... [more]
ILVB_CRYNE2.599e-1837.50Acetolactate synthase, mitochondrial OS=Cryptococc... [more]
ILVB_BACSU2.200e-1733.09Acetolactate synthase large subunit OS=Bacillus su... [more]
ILVI_HAEIN8.362e-1734.31Acetolactate synthase large subunit OS=Haemophilus... [more]
ILVB_CORGL8.362e-1737.31Acetolactate synthase large subunit OS=Corynebacte... [more]
ILVI_SALTY1.863e-1634.25Acetolactate synthase isozyme 3 large subunit OS=S... [more]
ILVI_BUCSC2.433e-1633.10Acetolactate synthase large subunit OS=Buchnera ap... [more]
ILVI_BUCBP4.150e-1638.81Acetolactate synthase large subunit OS=Buchnera ap... [more]
ILVB_SYNPX7.078e-1634.11Acetolactate synthase large subunit OS=Synechococc... [more]
ILVB_MYCLE7.078e-1637.50Acetolactate synthase OS=Mycobacterium leprae GN=i... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001M23_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001M23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185745 ID=CN185745; Name=CN185745; organism=Citrus sinensis; type=EST; length=629bp
TTTTCAATACACAAACAAATTATAATAACATTGTAACTCATAGAGTTTGT
TTGTTAAACAAACACTAGTTCCATTAAAACTGACACCTGAACTAAAAACA
CTGCCACACACTCATAGGTAAGTTAAGCCTGCAACTCAAAAGGAACATAA
ATACATAGCCAAGAAGGCATCTATGCTGCTTCAGCTTGTCGTTAATACTG
CGTTCTTCCATCACCTTCAGTGATCACATCTTTAAAAGCTCCACCACTGG
GGATCATAGGCAGGACATGCTCTTGATGAGGAACGATGACGTCCAGAAGG
TATGGTCCAGGAGTGTCCAACATAGTCTGAATTGCGGCTCTCAGATCTGC
CTTCCTTGTTACTTGTGCTCCAGGTATTCCACAGGCTTCTGCAAACTTCA
ACATATTCGGAAATATTTCAGACTCTCTTGATGGATCTCCCAAATACGTG
TGAGCCCTATTTGCCTTGTAAAACCGATCCTCCCATTGCATCACCATGCC
CAAGTGCTGATTATTCAACAGCAATATCTTGATGGGGAGTTTCTCTACCT
TAATAGTCGCCAACTCCTGGACGTTCATGATGAAACTCCCATCACCATCA
ATATCTACAATGATGGCATCAGGATTTGC
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