CN185745

Overview
NameCN185745
Unique NameCN185745
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length629
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6751 contig Csv1_Contig6751:507..1135. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185745 vs. ExPASy Swiss-Prot
Match: ILVI_ECOLI (Acetolactate synthase isozyme 3 large subunit OS=Escherichia coli (strain K12) GN=ilvI PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 9.245e-16
Identity = 48/146 (32.88%), Postives = 76/146 (52.05%), Query Frame = -1
Query:  201 ANPDAIIVDIDGDGSFIMNVQELATIKVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLRAAIQTMLD---TPGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGRT 629
            A P+  +V + GDGS  MN+QEL+T    +LP+ ++ LNN++LGMV QW+D  Y    + +Y+       +  P+ ++ AEA G  G Q++   +L + +   L+         +DV V   EHV PM   GG   ++      RT
Sbjct:  436 ALPEETVVCVTGDGSIQMNIQELSTALQYELPVLVVNLNNRYLGMVKQWQDMIYSGRHSQSYM-------QSLPDFVRLAEAYGHVGIQISHPHELESKLSEALEQVRNNRLVFVDVTVDGSEHVYPMQIRGGGMDEMWLSKTERT 574          
BLAST of CN185745 vs. ExPASy Swiss-Prot
Match: ILVB_MYCTU (Acetolactate synthase OS=Mycobacterium tuberculosis GN=ilvB PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 9.245e-16
Identity = 51/130 (39.23%), Postives = 69/130 (53.08%), Query Frame = -1
Query:  243 ANPDAIIVDIDGDGSFIMNVQELATIKVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLRAAI-QTMLDTPGPYLLDVIVPHQEHVLPMIPSG 629
            A P   +  IDGDG F M  QELAT  VE +P+K+ L+NN +LGMV QW+  FY    + T   D +  S   P+ +K AEA G  G +  R+ D+   I Q       P ++D IV     V PM+ +G
Sbjct:  468 ALPGTEVWAIDGDGCFQMTNQELATCAVEGIPVKVALINNGNLGMVRQWQSLFYAERYSQT---DLATHSHRIPDFVKLAEALGCVGLRCEREEDVVDVINQARAINDCPVVIDFIVGADAQVWPMVAAG 594          
BLAST of CN185745 vs. ExPASy Swiss-Prot
Match: ILVB_MYCBO (Acetolactate synthase OS=Mycobacterium bovis GN=ilvB PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 9.245e-16
Identity = 51/130 (39.23%), Postives = 69/130 (53.08%), Query Frame = -1
Query:  243 ANPDAIIVDIDGDGSFIMNVQELATIKVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLRAAI-QTMLDTPGPYLLDVIVPHQEHVLPMIPSG 629
            A P   +  IDGDG F M  QELAT  VE +P+K+ L+NN +LGMV QW+  FY    + T   D +  S   P+ +K AEA G  G +  R+ D+   I Q       P ++D IV     V PM+ +G
Sbjct:  468 ALPGTEVWAIDGDGCFQMTNQELATCAVEGIPVKVALINNGNLGMVRQWQSLFYAERYSQT---DLATHSHRIPDFVKLAEALGCVGLRCEREEDVVDVINQARAINDCPVVIDFIVGADAQVWPMVAAG 594          
BLAST of CN185745 vs. ExPASy Swiss-Prot
Match: ILVB_MYCAV (Acetolactate synthase OS=Mycobacterium avium GN=ilvB PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 9.245e-16
Identity = 51/128 (39.84%), Postives = 69/128 (53.91%), Query Frame = -1
Query:  243 PDAIIVDIDGDGSFIMNVQELATIKVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLRAAIQ-TMLDTPGPYLLDVIVPHQEHVLPMIPSG 623
            P+A +  IDGDG F M  QELAT  VE +PIK+ L+NN +LGMV QW+  FY+   + T LG P       P+ +K AEA G  G +  R+ D+   I         P ++  IV     V PM+ +G
Sbjct:  473 PEAEVWAIDGDGCFQMTNQELATCAVEGIPIKVALINNGNLGMVRQWQTLFYEERYSQTDLGHPLAP---HPDFVKLAEALGCVGLRCEREEDVVDVINAARAINDRPVVIAFIVGADAQVWPMVAAG 597          
BLAST of CN185745 vs. ExPASy Swiss-Prot
Match: ILVI_BUCAI (Acetolactate synthase large subunit OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=ilvI PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.207e-15
Identity = 47/138 (34.06%), Postives = 70/138 (50.72%), Query Frame = -1
Query:  225 ANPDAIIVDIDGDGSFIMNVQELATIKVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLRAAIQTMLDTPGP---YLLDVIVPHQEHVLPMIPSGGAFKDV 629
            A P   ++ I GDGS  MN+QEL+T +   L + IL LNN  LGMV QW+D  Y    +H+Y+       +  P+ +K +E+ G  G Q+T   +L   +   L          +DV + + EHV PM   GG   ++
Sbjct:  433 ALPKETVICITGDGSIQMNIQELSTARQYNLAVLILNLNNSSLGMVKQWQDMIYSGRHSHSYM-------DSLPDFVKLSESYGHFGIQITEPIELEEKLMLALSKLSDGHLVFVDVQIDNSEHVYPMQIQGGGMNEM 563          
BLAST of CN185745 vs. ExPASy Swiss-Prot
Match: ILVB_METAO (Probable acetolactate synthase large subunit OS=Methanococcus aeolicus GN=ilvB PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.207e-15
Identity = 44/136 (32.35%), Postives = 71/136 (52.21%), Query Frame = -1
Query:  222 ANPDAIIVDIDGDGSFIMNVQELATIKVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLRAAIQTMLDTPGPYLLDVIVPHQEHVLPMIPSGGAFKDVI 629
            A PD+ ++ I GDG F+MN QEL TI    +P+ I + +N+ LGMV QW++ FY   +     G         P+ +K AE+ GI   ++    ++  A++  ++   PYLLD  +      L M+P G    ++I
Sbjct:  443 AKPDSKVICITGDGGFMMNCQELGTIAEYNIPVVICIFDNRTLGMVYQWQNLFYGKRQCSVNFGGA-------PDFIKLAESYGIKARRIESPNEINEALKEAINCDEPYLLDFAI-DPSSALSMVPPGAKLTNII 570          
BLAST of CN185745 vs. ExPASy Swiss-Prot
Match: ILVB_LACLA (Acetolactate synthase large subunit OS=Lactococcus lactis subsp. lactis GN=ilvB PE=3 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 3.513e-15
Identity = 45/129 (34.88%), Postives = 71/129 (55.04%), Query Frame = -1
Query:  243 ANPDAIIVDIDGDGSFIMNVQELATIKVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLRAAIQTMLDTPGPYLLDVIVPHQEHVLPMIPSG 629
            A P+  ++   GDG F M  QELA +    + IK++L+NN  LGMV QW++ FY+  R+ +         ++ PN    AEA GI   ++     L   ++ + +   P L++V++   EHVLPMIP+G
Sbjct:  434 AQPNKNVIVFVGDGGFQMTNQELALLNGYGIAIKVVLINNHSLGMVRQWQESFYEERRSQSVF-------DVEPNFQLLAEAYGIKHVKLDNPKTLADDLKIITEDE-PMLIEVLISKSEHVLPMIPAG 554          
BLAST of CN185745 vs. ExPASy Swiss-Prot
Match: ILVI_BUCAP (Acetolactate synthase large subunit OS=Buchnera aphidicola subsp. Schizaphis graminum GN=ilvI PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.022e-14
Identity = 46/138 (33.33%), Postives = 68/138 (49.28%), Query Frame = -1
Query:  225 ANPDAIIVDIDGDGSFIMNVQELATIKVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLRAAI---QTMLDTPGPYLLDVIVPHQEHVLPMIPSGGAFKDV 629
            A P A ++ + GDGS  MN+QEL+T +   L + IL LNN  LGMV QW+D  Y    +H+Y+       +  P+ +K  E+ G  G +V    +L   +      L       LD+ +   EHV PM   GG   ++
Sbjct:  433 ALPKATVICVTGDGSIQMNIQELSTARQYNLAVLILNLNNSSLGMVKQWQDMIYSGRHSHSYM-------DSLPDFVKLVESYGHIGLKVKTNEELEEKLILALKKLSEGNLVFLDIQIDDSEHVYPMQIQGGGMNEM 563          
BLAST of CN185745 vs. ExPASy Swiss-Prot
Match: ILVB_SPIPL (Acetolactate synthase (Fragment) OS=Spirulina platensis GN=ilvY PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.277e-14
Identity = 46/136 (33.82%), Postives = 67/136 (49.26%), Query Frame = -1
Query:  222 ANPDAIIVDIDGDGSFIMNVQELATIKVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLRAAIQTMLDTPGPYLLDVIVPHQEHVLPMIPSGGAFKDVI 629
            A+P   +  I GDGSF MN+QEL TI    + +K+++LNN  LGMV QW+  FY      T L D +      P   + A+  G+    V ++   +  +   L   GP +LDV V   E   PM+  G    D++
Sbjct:  446 AHPHDTVTCISGDGSFQMNMQELGTIAQYGIGVKVIILNNGWLGMVRQWQHMFYNDRYEATNLEDGT------PEFARLADVYGLEAMNVRQRKIYQRRLPKALSHKGPMILDVRVTRDEDCYPMVAPGHDNSDMM 575          
BLAST of CN185745 vs. ExPASy Swiss-Prot
Match: POXB_ECOLI (Pyruvate dehydrogenase [cytochrome] OS=Escherichia coli (strain K12) GN=poxB PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.954e-11
Identity = 40/122 (32.79%), Postives = 64/122 (52.46%), Query Frame = -1
Query:  258 PDAIIVDIDGDGSFIMNVQELATIKVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLRAAIQTMLDTPGPYLLDVIVPHQEHVLP 623
            P+  +V + GDG F M + +  ++   KLP+KI++ NN  LG V           +A  YL D +   +   N  + AEACGI G +V + +++  A+Q      GP L+DV+V  +E  +P
Sbjct:  423 PERQVVAMCGDGGFSMLMGDFLSVVQMKLPVKIVVFNNSVLGFVAM-------EMKAGGYLTDGTELHDT--NFARIAEACGITGIRVEKASEVDEALQRAFSIDGPVLVDVVVAKEELAIP 535          
The following BLAST results are available for this feature:
BLAST of CN185745 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
ILVI_ECOLI9.245e-1632.88Acetolactate synthase isozyme 3 large subunit OS=E... [more]
ILVB_MYCTU9.245e-1639.23Acetolactate synthase OS=Mycobacterium tuberculosi... [more]
ILVB_MYCBO9.245e-1639.23Acetolactate synthase OS=Mycobacterium bovis GN=il... [more]
ILVB_MYCAV9.245e-1639.84Acetolactate synthase OS=Mycobacterium avium GN=il... [more]
ILVI_BUCAI1.207e-1534.06Acetolactate synthase large subunit OS=Buchnera ap... [more]
ILVB_METAO1.207e-1532.35Probable acetolactate synthase large subunit OS=Me... [more]
ILVB_LACLA3.513e-1534.88Acetolactate synthase large subunit OS=Lactococcus... [more]
ILVI_BUCAP1.022e-1433.33Acetolactate synthase large subunit OS=Buchnera ap... [more]
ILVB_SPIPL2.277e-1433.82Acetolactate synthase (Fragment) OS=Spirulina plat... [more]
POXB_ECOLI8.954e-1132.79Pyruvate dehydrogenase [cytochrome] OS=Escherichia... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001M23_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001M23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185745 ID=CN185745; Name=CN185745; organism=Citrus sinensis; type=EST; length=629bp
TTTTCAATACACAAACAAATTATAATAACATTGTAACTCATAGAGTTTGT
TTGTTAAACAAACACTAGTTCCATTAAAACTGACACCTGAACTAAAAACA
CTGCCACACACTCATAGGTAAGTTAAGCCTGCAACTCAAAAGGAACATAA
ATACATAGCCAAGAAGGCATCTATGCTGCTTCAGCTTGTCGTTAATACTG
CGTTCTTCCATCACCTTCAGTGATCACATCTTTAAAAGCTCCACCACTGG
GGATCATAGGCAGGACATGCTCTTGATGAGGAACGATGACGTCCAGAAGG
TATGGTCCAGGAGTGTCCAACATAGTCTGAATTGCGGCTCTCAGATCTGC
CTTCCTTGTTACTTGTGCTCCAGGTATTCCACAGGCTTCTGCAAACTTCA
ACATATTCGGAAATATTTCAGACTCTCTTGATGGATCTCCCAAATACGTG
TGAGCCCTATTTGCCTTGTAAAACCGATCCTCCCATTGCATCACCATGCC
CAAGTGCTGATTATTCAACAGCAATATCTTGATGGGGAGTTTCTCTACCT
TAATAGTCGCCAACTCCTGGACGTTCATGATGAAACTCCCATCACCATCA
ATATCTACAATGATGGCATCAGGATTTGC
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