DC900011

Overview
NameDC900011
Unique NameDC900011
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length850
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: Y3475_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana GN=At3g47570 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.789e-19
Identity = 56/150 (37.33%), Postives = 81/150 (54.00%), Query Frame = 2
Query:  128 IIHRDMKSSNVLLDENFEARVSDFGMARLMSAMD-----THLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPELMKEDPNIEIELLQHL----HVASACLDDRPWRR 550
            I H D+K SNVLLD++  A VSDFG+ARL+   D       LS + + GT GY  PEY    + S  GDVYS+G++LLE+ TGKRPT+    G+  L  + K     +I D+ D  ++     +   +++ L     V   C ++ P  R
Sbjct:  835 IAHCDLKPSNVLLDDDLTAHVSDFGLARLLLKFDEESFFNQLSSAGVRGTIGYAAPEYGVGGQPSINGDVYSFGILLLEMFTGKRPTNELFGGNFTLNSYTKSALPERILDIVDESILHIGLRVGFPVVECLTMVFEVGLRCCEESPMNR 984          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: Y2393_ARATH (Probable receptor-like protein kinase At2g39360 OS=Arabidopsis thaliana GN=At2g39360 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.789e-19
Identity = 58/147 (39.46%), Postives = 90/147 (61.22%), Query Frame = 2
Query:  128 IIHRDMKSSNVLLDENFEARVSDFGMARLMSAMD-THLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTD-SADFGDNNLVGW-VKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTM 559
            IIHRD+KS+N+LLD+NF A+V+DFG+++    +D TH+S + + G+ GY+ PEY    + + K DVYS+GVV+LE++ G+   D S      NL+ W +K   K K+ D+ DP L+ +    E++  ++  V   CL      RP M
Sbjct:  608 IIHRDVKSANILLDDNFMAKVADFGLSKTGPDLDQTHVSTA-VKGSFGYLDPEYLTRQQLTEKSDVYSFGVVMLEVVCGRPVIDPSLPREKVNLIEWAMKLVKKGKLEDIIDPFLVGKVKLEEVK--KYCEVTEKCLSQNGIERPAM 751          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: WAK3_ARATH (Wall-associated receptor kinase 3 OS=Arabidopsis thaliana GN=WAK3 PE=2 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 6.789e-19
Identity = 57/165 (34.55%), Postives = 100/165 (60.61%), Query Frame = 2
Query:  104 NSARGIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPT--DSADFGDNNLVGWVKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQ 592
            +S+  IP IIHRD+K++N+LLDEN  A+V+DFG ++L+  MD     + + GT GY+ PEYY +   + K DVYS+GVVL+ELL+G++    +      + +  +V    + ++ ++ D +++ ED N++ E+ +   +A+ C       RP M +V A  + ++
Sbjct:  529 HSSASIP-IIHRDIKTANILLDENLTAKVADFGASKLIP-MDKEQLTTMVQGTLGYLDPEYYTTGLLNEKSDVYSFGVVLMELLSGQKALCFERPQASKHLVSYFVSATEENRLHEIIDDQVLNED-NLK-EIQEAARIAAECTRLMGEERPRMKEVAAKLEALR 689          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: Y5181_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51810 OS=Arabidopsis thaliana GN=At1g51810 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 8.867e-19
Identity = 59/174 (33.91%), Postives = 102/174 (58.62%), Query Frame = 2
Query:  122 PHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAM-DTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWV-KQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAG-SGLDSQSTIATD 634
            P ++HRD+K++N+LL+E+F+ +++DFG++R      +TH+S + +AGT GY+ PEYY++   + K DVYS+GVVLL ++T  +P    +    ++  WV     K  I  + DP L+ +  +  +   + + +A +C++     RPTM QV+   KE  A  S  +   T  T+
Sbjct:  696 PLMVHRDVKTTNILLNEHFDTKLADFGLSRSFPIEGETHVS-TVVAGTIGYLDPEYYRTNWLTEKSDVYSFGVVLLVMIT-NQPVIDQNREKRHIAEWVGGMLTKGDIKSITDPNLLGDYNSGSV--WKAVELAMSCMNPSSMTRPTMSQVVFELKECLASESSREVSMTFGTE 865          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: WAK5_ARATH (Wall-associated receptor kinase 5 OS=Arabidopsis thaliana GN=WAK5 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 8.867e-19
Identity = 63/170 (37.06%), Postives = 98/170 (57.65%), Query Frame = 2
Query:  104 NSARGIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTG------KRPTDSADFGDNNLVGW-VKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQ 592
            +S   IP IIHRD+K++N+LLDEN  A+V+DFG +RL+  MD     + + GT GY+ PEYY +   + K DVYS+GVVL+ELL+G      +RP  S      +LV + V    + ++ ++ D ++M E    EI+  +   +A  C       RP+M +V A  + ++
Sbjct:  522 HSYASIP-IIHRDVKTANILLDENLTAKVADFGASRLIP-MDQEQLTTMVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGEKALCFERPQSS-----KHLVSYFVSAMKENRLHEIIDGQVMNEYNQREIQ--ESARIAVECTRIMGEERPSMKEVAAELEALR 682          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: PTI1_SOLLC (Pto-interacting protein 1 OS=Solanum lycopersicum GN=PTI1 PE=1 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 8.867e-19
Identity = 58/148 (39.19%), Postives = 84/148 (56.76%), Query Frame = 2
Query:  122 PHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTD-SADFGDNNLVGWVKQH-AKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTM 559
            PHIIHRD+KSSN+LL ++  A+++DF ++     M   L  + + GT GY  PEY  + + S+K DVYS+GVVLLELLTG++P D +   G  +LV W     ++ K+    D  L  + P   I  +    VA+ C+      RP M
Sbjct:  192 PHIIHRDIKSSNILLFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPRLSEDKVKQCVDARLNTDYPPKAIAKM--AAVAALCVQYEADFRPNM 337          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: Y4245_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.158e-18
Identity = 57/157 (36.31%), Postives = 93/157 (59.24%), Query Frame = 2
Query:  122 PHIIHRDMKSSNVLLDENFEARVSDFGMARLMSA-MDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVK-QHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKE 586
            P +IHRD+KS N+LLD NF+A++ DFG++R      +TH+S + +AG+PGY+ PEYY++   + K DV+S+GVVLLE++T  +P        +++  WV  +     I ++ DP +  +  +    L + L +A +C+      RP M QV    +E
Sbjct:  710 PPMIHRDIKSMNILLDNNFQAKLGDFGLSRSFPVGSETHVSTN-VAGSPGYLDPEYYRTNWLTEKSDVFSFGVVLLEIIT-SQPVIDQTREKSHIGEWVGFKLTNGDIKNIVDPSMNGDYDS--SSLWKALELAMSCVSPSSSGRPNMSQVANELQE 862          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: WAK1_ARATH (Wall-associated receptor kinase 1 OS=Arabidopsis thaliana GN=WAK1 PE=1 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 1.158e-18
Identity = 64/170 (37.65%), Postives = 99/170 (58.24%), Query Frame = 2
Query:  104 NSARGIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTG------KRPTDSADFGDNNLVGWVKQHAK-LKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQ 592
            +S+  IP IIHRD+K++N+LLD N  A+V+DFG +RL+  MD     + + GT GY+ PEYY +   + K DVYS+GVVL+ELL+G      KRP  S      +LV +     K  ++ ++   E+M ED N++ E+ +   +A+ C       RP M +V A  + ++
Sbjct:  523 HSSASIP-IIHRDIKTANILLDVNLTAKVADFGASRLIP-MDKEELETMVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGQKALCFKRPQSS-----KHLVSYFATATKENRLDEIIGGEVMNED-NLK-EIQEAARIAAECTRLMGEERPRMKEVAAKLEALR 683          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: CX32_ARATH (Probable serine/threonine-protein kinase Cx32, chloroplastic OS=Arabidopsis thaliana GN=At4g35600 PE=1 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 1.158e-18
Identity = 59/192 (30.73%), Postives = 105/192 (54.69%), Query Frame = 2
Query:   95 LVPNSARGIP-------HIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTG------KRPTDSADFGDNNLVGWVKQHA--KLKISDVFDPELMKE-DPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGLDSQST 622
            +V  +ARG+         +I+RD K+SN+LLD N++A++SDFG+A+L  A +     + + GT GY  PEY  +     K DV+++GVVLLE++TG      KRP      G  +LV W++     K ++  + D  +  +    +  E+ +   +  +C++  P  RP M +V+ + + IQ  + + ++S+
Sbjct:  196 IVIGAARGLAFLHSLQREVIYRDFKASNILLDSNYDAKLSDFGLAKLGPADEKSHVTTRIMGTYGYAAPEYMATGHLYVKSDVFAFGVVLLEIMTGLTAHNTKRPR-----GQESLVDWLRPELSNKHRVKQIMDKGIKGQYTTKVATEMAR---ITLSCIEPDPKNRPHMKEVVEVLEHIQGLNVVPNRSS 379          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: Y1755_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07550 OS=Arabidopsis thaliana GN=At1g07550 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.512e-18
Identity = 56/157 (35.67%), Postives = 95/157 (60.51%), Query Frame = 2
Query:  122 PHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKL-KISDVFDPELMKE-DPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKE 586
            P I+HRD+KS+N+LL E FEA+++DFG++R    +      + +AGT GY+ PEY+++   S K DVYS+GVVLLE+++G+   D +   + N+V W     +   I  + DP L ++ D +   ++++   +A +C++     RP M QV+ +  E
Sbjct:  678 PKIVHRDVKSTNILLSEEFEAKIADFGLSRSF-LIGNEAQPTVVAGTFGYLDPEYHKTSLLSMKSDVYSFGVVLLEIISGQDVIDLSR-ENCNIVEWTSFILENGDIESIVDPNLHQDYDTSSAWKVVE---LAMSCVNRTSKERPNMSQVVHVLNE 829          
The following BLAST results are available for this feature:
BLAST of DC900011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 291
Match NameE-valueIdentityDescription
Y3475_ARATH6.789e-1937.33Probable LRR receptor-like serine/threonine-protei... [more]
Y2393_ARATH6.789e-1939.46Probable receptor-like protein kinase At2g39360 OS... [more]
WAK3_ARATH6.789e-1934.55Wall-associated receptor kinase 3 OS=Arabidopsis t... [more]
Y5181_ARATH8.867e-1933.91Probable LRR receptor-like serine/threonine-protei... [more]
WAK5_ARATH8.867e-1937.06Wall-associated receptor kinase 5 OS=Arabidopsis t... [more]
PTI1_SOLLC8.867e-1939.19Pto-interacting protein 1 OS=Solanum lycopersicum ... [more]
Y4245_ARATH1.158e-1836.31Probable LRR receptor-like serine/threonine-protei... [more]
WAK1_ARATH1.158e-1837.65Wall-associated receptor kinase 1 OS=Arabidopsis t... [more]
CX32_ARATH1.158e-1830.73Probable serine/threonine-protein kinase Cx32, chl... [more]
Y1755_ARATH1.512e-1835.67Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionDC900011 VSS Citrus sinensis cDNA clone VS27Q22 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900011 ID=DC900011; Name=DC900011; organism=Citrus sinensis; type=EST; length=850bp
GTTTTTTTTTTTTTTTTTTTAGAGAAAATAGAAATTTTTATATATTAAAA
GGGAAAGGAAGAAACAGACTAGAAAAAAAAAAACTCGAGACTAGCTCGTG
CCGAATTCGGCACGAGGCATCCCACACATTATCCACCGGGATATGAAATC
GAGCAATGTTCTGCTAGACGAAAACTTTGAGGCCAGAGTCTCAGATTTTG
GAATGGCAAGACTAATGAGTGCGATGGATACACATTTGAGTGTCAGTACG
CTAGCAGGCACACCCGGCTATGTCCCTCCCGAATACTATCAAAGCTTTAG
ATGTTCGACGAAAGGCGATGTTTACAGTTATGGTGTAGTTTTGCTCGAGT
TGCTAACGGGAAAAAGGCCAACAGATTCAGCAGATTTCGGTGACAATAAC
CTAGTTGGGTGGGTAAAGCAGCATGCGAAGCTGAAAATAAGCGATGTCTT
TGATCCAGAACTCATGAAAGAGGATCCAAACATCGAGATTGAGCTTCTTC
AACACTTGCATGTAGCGAGTGCTTGCCTGGATGATCGACCATGGAGGAGA
CCGACAATGATTCAGGTTATGGCAATGTTTAAAGAAATCCAAGCCGGTTC
AGGACTTGACTCGCAATCTACTATTGCCACTGATGAAGGAGGTTTCGGTA
CAGTCGAAATGGTAGAGATGAGCATCCAAGAAGCTCCAGAACTAAGCACC
AAGCCTTAGNCCATTCAATTTTCAGGACAAGCATTCTTTCAGTGCCCCAA
AATTTTCCCACTTGAAAACCAAAAAAGTTGCCTTTGGTATCTCTACCATT
TAGTGTATGTAATCTTTGTATCCCTTTTGAAAATTCTTGTTATTTATACA
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