DC900011

Overview
NameDC900011
Unique NameDC900011
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length850
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: LRKA1_ARATH (Lectin-domain containing receptor kinase A4.1 OS=Arabidopsis thaliana GN=LECRKA4.1 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.512e-18
Identity = 58/145 (40.00%), Postives = 80/145 (55.17%), Query Frame = 2
Query:  128 IIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQ-HAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTM 559
            +IHRD+K SNVL+D     R+ DFG+ARL     T    + L GT GY+ PE  ++   S+  DV+++GV+LLE++ G++PTDS  F    LV WV + HA  +I    DP L       E  L   L V   C   +P  RP+M
Sbjct:  490 VIHRDVKPSNVLIDSKMNPRLGDFGLARLYER-GTLSETTALVGTIGYMAPELSRNGNPSSASDVFAFGVLLLEIVCGRKPTDSGTF---FLVDWVMELHANGEILSAIDPRLGSGYDGGEARLA--LAVGLLCCHQKPASRPSM 628          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: CRK30_ARATH (Putative cysteine-rich receptor-like protein kinase 30 OS=Arabidopsis thaliana GN=CRK30 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.512e-18
Identity = 54/153 (35.29%), Postives = 86/153 (56.21%), Query Frame = 2
Query:  128 IIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTD--SADFGDNNLVGWVKQHAKLKIS-DVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 577
            IIHRD+K+SN+LLD +   +++DFGMAR      T  S   + GT GY+PPEY    + STK DVYS+GV++LE+++G++ +     D    NLV +V +      S ++ DP +       E+   + +H+   C+ + P  RP +  +  M
Sbjct:  470 IIHRDIKASNILLDADMNPKIADFGMARNFRDHQTEDSTGRVVGTFGYMPPEYVAHGQFSTKSDVYSFGVLILEIVSGRKNSSFYQMDGSVCNLVTYVWRLWNTDSSLELVDPAISGSYEKDEV--TRCIHIGLLCVQENPVNRPALSTIFQM 620          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: Y5189_ARATH (Probable LRR receptor-like protein kinase At1g51890 OS=Arabidopsis thaliana GN=At1g51890 PE=2 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.975e-18
Identity = 57/160 (35.62%), Postives = 94/160 (58.75%), Query Frame = 2
Query:  122 PHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVK-QHAKLKISDVFDPELMKE-DPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQA 595
            P ++HRD+K +N+LL+E  +A+++DFG++R          ++ +AGTPGY+ PEYY++   S K DVYS+GVVLLE++T  +P  + +    ++  WV        I  + DP+L ++ D N    + + + +A AC++    RRPTM  V+    E  A
Sbjct:  688 PPMVHRDVKPTNILLNERSQAKLADFGLSRSFPVDGESHVMTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVT-NQPVMNKNRERPHINEWVMFMLTNGDIKSIVDPKLNEDYDTN---GVWKVVELALACVNPSSSRRPTMPHVVMELNECLA 843          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: Y2232_ARATH (Probable receptor-like protein kinase At2g23200 OS=Arabidopsis thaliana GN=At2g23200 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.975e-18
Identity = 57/151 (37.75%), Postives = 95/151 (62.91%), Query Frame = 2
Query:  128 IIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDS-ADFGDNNLVGWVK-QHAKLKISDVFDPELMKEDPNIEI-ELLQHLHVASACLDDRPWRRPTMIQVM 571
            IIHRD+KS+N+LLDE+  A+V+DFG++++ +  ++++S++ + GT GY+ PEY Q+ + + K DVY++GVVLLE+L  +   D      + NL  WV    +K  I ++ DP L+ +   IE   L + + +A  CL +    RP+M  V+
Sbjct:  609 IIHRDVKSTNILLDEHNIAKVADFGLSKIHNQDESNISIN-IKGTFGYLDPEYLQTHKLTEKSDVYAFGVVLLEVLFARPAIDPYLPHEEVNLSEWVMFCKSKGTIDEILDPSLIGQ---IETNSLKKFMEIAEKCLKEYGDERPSMRDVI 755          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: NORK_MEDTR (Nodulation receptor kinase OS=Medicago truncatula GN=NORK PE=1 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.975e-18
Identity = 56/151 (37.09%), Postives = 96/151 (63.58%), Query Frame = 2
Query:  128 IIHRDMKSSNVLLDENFEARVSDFGMARLMSAM-DTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTD-SADFGDNNLVGWVKQHAKL-KISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVM 571
            +IHRD+KSSN+LLD++  A+V+DFG ++      D+++S+  + GT GY+ PEYY++ + S K DV+S+GVVLLE+++G+ P +      + +LV W K + +  K+ ++ DP + K   + E  L + + VA  CL+     RP M+ ++
Sbjct:  718 VIHRDVKSSNILLDQSMCAKVADFGFSKYAPQEGDSYVSLE-VRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLNIKRPRIEWSLVEWAKPYIRASKVDEIVDPGI-KGGYHAE-ALWRVVEVALQCLEPYSTYRPCMVDIV 865          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: IRAK4_MOUSE (Interleukin-1 receptor-associated kinase 4 OS=Mus musculus GN=Irak4 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.975e-18
Identity = 57/160 (35.62%), Postives = 92/160 (57.50%), Query Frame = 2
Query:  125 HIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQH---AKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQA 595
            H IHRD+KS+N+LLD++F A++SDFG+AR  + +   +  S + GT  Y+ PE  +    + K D+YS+GVVLLEL+TG    D  +  +  L+  +K+     +  I D  D ++   DP   +E +     AS CL ++  RRP + +V  + +E+ A
Sbjct:  306 HHIHRDIKSANILLDKDFTAKISDFGLARASARLAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLELITGLAAVD--ENREPQLLLDIKEEIEDEEKTIEDYTDEKMSDADP-ASVEAM--YSAASQCLHEKKNRRPDIAKVQQLLQEMSA 459          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: CRK7_ARATH (Cysteine-rich receptor-like protein kinase 7 OS=Arabidopsis thaliana GN=CRK7 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.975e-18
Identity = 53/153 (34.64%), Postives = 87/153 (56.86%), Query Frame = 2
Query:  128 IIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGD-NNLV--GWVKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 577
            IIHRD+K+SN+LLD +   +++DFGMAR+     T  + S + GT GY+ PEY    + S K DVYS+GV++LE+++G++     +  D  +LV   W +        D+ DP +   D   + E+++  H+   C+ + P +RP M  +  M
Sbjct:  457 IIHRDLKASNILLDADMNPKIADFGMARIFGMDQTQQNTSRIVGTYGYMSPEYAMRGQFSMKSDVYSFGVLVLEIISGRKNNSFIETDDAQDLVTHAW-RLWRNGTALDLVDPFI--ADSCRKSEVVRCTHIGLLCVQEDPVKRPAMSTISVM 606          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: APK1B_ARATH (Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.975e-18
Identity = 60/158 (37.97%), Postives = 87/158 (55.06%), Query Frame = 2
Query:  128 IIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTD-SADFGDNNLVGWVKQ--HAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQ 592
            +I+RD K+SN+LLD  + A++SDFG+A+     D     + + GT GY  PEY  +   +TK DVYSYGVVLLE+L+G+R  D +   G+  LV W +     K K+  V D  L  +D     E  +   +A  CL      RP M +V++  + IQ
Sbjct:  200 VIYRDFKTSNILLDSEYNAKLSDFGLAKDGPTGDKSHVSTRIMGTYGYAAPEYLATGHLTTKSDVYSYGVVLLEVLSGRRAVDKNRPPGEQKLVEWARPLLANKRKLFRVIDNRL--QDQYSMEEACKVATLALRCLTFEIKLRPNMNEVVSHLEHIQ 355          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: Y2706_ARATH (Probable receptor-like protein kinase At2g47060 OS=Arabidopsis thaliana GN=At2g47060 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.580e-18
Identity = 59/148 (39.86%), Postives = 83/148 (56.08%), Query Frame = 2
Query:  122 PHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTD-SADFGDNNLVGW-VKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTM 559
            PHIIHRD+KSSNVLL E+  A+++DF ++     M   L  + + GT GY  PEY  + + + K DVYS+GVVLLELLTG++P D     G  +LV W   + ++ K+    D  L  + P   +  L    VA+ C+      RP M
Sbjct:  197 PHIIHRDIKSSNVLLFEDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHRLPRGQQSLVTWATPKLSEDKVKQCVDARLGGDYPPKAVAKL--AAVAALCVQYEADFRPNM 342          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: WAK4_ARATH (Wall-associated receptor kinase 4 OS=Arabidopsis thaliana GN=WAK4 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.580e-18
Identity = 62/170 (36.47%), Postives = 98/170 (57.65%), Query Frame = 2
Query:  104 NSARGIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTG------KRPTDSADFGDNNLVGWVKQHAK-LKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQ 592
            +S+  IP IIHRD+K++N+LLDEN  A+V+DFG +RL+  MD     + + GT GY+ PEYY +   + K DVYS+GVVL+ELL+G      +RP  S      ++V +     K  ++ ++ D ++M E  N + E+ +   +A  C       RP M +V A  + ++
Sbjct:  524 HSSASIP-IIHRDIKTANILLDENLTAKVADFGASRLIP-MDKEDLATMVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGQKALCFERPQTS-----KHIVSYFASATKENRLHEIIDGQVMNE--NNQREIQKAARIAVECTRLTGEERPGMKEVAAELEALR 684          
The following BLAST results are available for this feature:
BLAST of DC900011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 291
Match NameE-valueIdentityDescription
LRKA1_ARATH1.512e-1840.00Lectin-domain containing receptor kinase A4.1 OS=A... [more]
CRK30_ARATH1.512e-1835.29Putative cysteine-rich receptor-like protein kinas... [more]
Y5189_ARATH1.975e-1835.63Probable LRR receptor-like protein kinase At1g5189... [more]
Y2232_ARATH1.975e-1837.75Probable receptor-like protein kinase At2g23200 OS... [more]
NORK_MEDTR1.975e-1837.09Nodulation receptor kinase OS=Medicago truncatula ... [more]
IRAK4_MOUSE1.975e-1835.63Interleukin-1 receptor-associated kinase 4 OS=Mus ... [more]
CRK7_ARATH1.975e-1834.64Cysteine-rich receptor-like protein kinase 7 OS=Ar... [more]
APK1B_ARATH1.975e-1837.97Protein kinase APK1B, chloroplastic OS=Arabidopsis... [more]
Y2706_ARATH2.580e-1839.86Probable receptor-like protein kinase At2g47060 OS... [more]
WAK4_ARATH2.580e-1836.47Wall-associated receptor kinase 4 OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionDC900011 VSS Citrus sinensis cDNA clone VS27Q22 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900011 ID=DC900011; Name=DC900011; organism=Citrus sinensis; type=EST; length=850bp
GTTTTTTTTTTTTTTTTTTTAGAGAAAATAGAAATTTTTATATATTAAAA
GGGAAAGGAAGAAACAGACTAGAAAAAAAAAAACTCGAGACTAGCTCGTG
CCGAATTCGGCACGAGGCATCCCACACATTATCCACCGGGATATGAAATC
GAGCAATGTTCTGCTAGACGAAAACTTTGAGGCCAGAGTCTCAGATTTTG
GAATGGCAAGACTAATGAGTGCGATGGATACACATTTGAGTGTCAGTACG
CTAGCAGGCACACCCGGCTATGTCCCTCCCGAATACTATCAAAGCTTTAG
ATGTTCGACGAAAGGCGATGTTTACAGTTATGGTGTAGTTTTGCTCGAGT
TGCTAACGGGAAAAAGGCCAACAGATTCAGCAGATTTCGGTGACAATAAC
CTAGTTGGGTGGGTAAAGCAGCATGCGAAGCTGAAAATAAGCGATGTCTT
TGATCCAGAACTCATGAAAGAGGATCCAAACATCGAGATTGAGCTTCTTC
AACACTTGCATGTAGCGAGTGCTTGCCTGGATGATCGACCATGGAGGAGA
CCGACAATGATTCAGGTTATGGCAATGTTTAAAGAAATCCAAGCCGGTTC
AGGACTTGACTCGCAATCTACTATTGCCACTGATGAAGGAGGTTTCGGTA
CAGTCGAAATGGTAGAGATGAGCATCCAAGAAGCTCCAGAACTAAGCACC
AAGCCTTAGNCCATTCAATTTTCAGGACAAGCATTCTTTCAGTGCCCCAA
AATTTTCCCACTTGAAAACCAAAAAAGTTGCCTTTGGTATCTCTACCATT
TAGTGTATGTAATCTTTGTATCCCTTTTGAAAATTCTTGTTATTTATACA
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