DC900011

Overview
NameDC900011
Unique NameDC900011
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length850
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: Y5332_ARATH (Probable inactive receptor kinase At5g53320 OS=Arabidopsis thaliana GN=At5g53320 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.565e-15
Identity = 57/175 (32.57%), Postives = 90/175 (51.43%), Query Frame = 2
Query:   95 LVPNSARGIPHI--------IHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLK-ISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQ 592
            +V  +ARG+ HI        +H ++KSSN+ L+      +S  GMA LM ++  H          GY  PE   + + +   DVYS+G+++ E+LTGK           NLV WV    + +   +VFD EL++    +E E+++ L V   C    P +RP MI+V+ M +EI+
Sbjct:  412 MVYGTARGVAHIHSQSGGKLVHGNIKSSNIFLNGKGYGCISGTGMATLMHSLPRH--------AVGYRAPEITDTRKGTQPSDVYSFGILIFEVLTGKSEVA-------NLVRWVNSVVREEWTGEVFDEELLR-CTQVEEEMVEMLQVGMVCTARLPEKRPNMIEVVRMVEEIR 570          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: Y4374_ARATH (Probable inactive receptor kinase At4g23740 OS=Arabidopsis thaliana GN=At4g23740 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.044e-15
Identity = 55/157 (35.03%), Postives = 88/157 (56.05%), Query Frame = 2
Query:  128 IIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDN--NLVGWVKQHAKLK-ISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEI 589
            ++H ++KSSN+ L+      VSD G+  +MS +   +S        GY  PE   + + S   DVYS+GVVLLELLTGK P  +   GD   +LV WV    + +  ++VFD EL++   NIE E+++ L +A +C+     +RP M  ++ + + +
Sbjct:  459 LVHGNIKSSNIFLNSESNGCVSDLGLTAVMSPLAPPISRQA-----GYRAPEVTDTRKSSQLSDVYSFGVVLLELLTGKSPIHTT-AGDEIIHLVRWVHSVVREEWTAEVFDIELLRY-TNIEEEMVEMLQIAMSCVVKAADQRPKMSDLVRLIENV 608          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: Y1570_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g05700 OS=Arabidopsis thaliana GN=At1g05700 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.044e-15
Identity = 52/145 (35.86%), Postives = 88/145 (60.69%), Query Frame = 2
Query:  122 PHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTL-AGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQ--HAKLKISDVFDPELMKE-DPNIEIELLQ-HLHVASACLDDRP 541
            P I+HRD+K+SN+LL+E   A+++DFG++R     ++   VSTL AGTPGY+ P  +++   + K D+YS+GVVLLE++TGK     +     ++  WV     +   +++V D ++ K+ D N   ++++  L   S  + DRP
Sbjct:  687 PPIVHRDVKTSNILLNEKNRAKLADFGLSRSFHT-ESRSHVSTLVAGTPGYLDPLCFETNGLNEKSDIYSFGVVLLEMITGKTVIKESQTKRVHVSDWVISILRSTNDVNNVIDSKMAKDFDVNSVWKVVELALSSVSQNVSDRP 830          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: KPEL_DROME (Serine/threonine-protein kinase pelle OS=Drosophila melanogaster GN=pll PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.487e-15
Identity = 52/163 (31.90%), Postives = 88/163 (53.99%), Query Frame = 2
Query:  104 NSARGIPHIIHRDMKSSNVLLDENFEARVSDFGMARL-MSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGD--NNLVGWVKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFK 583
            ++ARG P +IH D+K +N+LLD+  + ++ DFG+ R    ++D  + V+ + GT  Y+PPE+    + ST  DVYS+G+VLLE+ TG++ TD     +   NL+ +VKQ  +    ++ +  L           +  +     C    P  RP+M  V+  F+
Sbjct:  335 HTARGTP-LIHGDIKPANILLDQCLQPKIGDFGLVREGPKSLDAVVEVNKVFGTKIYLPPEFRNFRQLSTGVDVYSFGIVLLEVFTGRQVTDRVPENETKKNLLDYVKQQWRQNRMELLEKHLAAPMGKELDMCMCAIEAGLHCTALDPQDRPSMNAVLKRFE 496          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: Y2214_ARATH (Probable receptor-like protein kinase At2g21480 OS=Arabidopsis thaliana GN=At2g21480 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.554e-15
Identity = 58/154 (37.66%), Postives = 86/154 (55.84%), Query Frame = 2
Query:  128 IIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDN--NLVGWV---KQHAKLKISDVFDPELM-KEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVM 571
            IIHRD+KS+N+LLDE   A+V+DFG+++ ++    H+S + + G+ GY+ PEY++  + + K DVYS+GVVLLE L   RP  +        NL  W    KQ   L+   + DP L+   +P     + +    A  CL D    RPTM  V+
Sbjct:  645 IIHRDVKSTNILLDEALVAKVADFGLSKDVAFGQNHVS-TAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLLEALCA-RPAINPQLPREQVNLAEWAMLWKQKGLLE--KIIDPHLVGAVNPE---SMKKFAEAAEKCLADYGVDRPTMGDVL 791          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: Y1061_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At1g50610 OS=Arabidopsis thaliana GN=At1g50610 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.947e-15
Identity = 58/167 (34.73%), Postives = 90/167 (53.89%), Query Frame = 2
Query:  128 IIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFR--CSTKGDVYSYGVVLLELLTGKRPTDSADFG-DNN--LVGWVKQHAK-LKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGLD 610
            I H  MKSSN++LD++FE  ++D+ +  +MS+   H  ++       Y  PEY  S     + K DV+ +GV++LE+LTG+ P +    G D+N  LV WV    K  K  DVFD E MK   N + E++  L +   C ++   RR  M +V+ M + ++ G   D
Sbjct:  496 IPHGHMKSSNIVLDDSFEPLLTDYALRPMMSSEHAHNFMT------AYKSPEYRPSKGQIITKKTDVWCFGVLILEVLTGRFPENYLTQGYDSNMSLVTWVNDMVKEKKTGDVFDKE-MKGKKNCKAEMINLLKIGLRCCEEEEERRMDMREVVEMVEMLREGESED 655          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: SRF1_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsis thaliana GN=SRF1 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 5.947e-15
Identity = 57/154 (37.01%), Postives = 81/154 (52.60%), Query Frame = 2
Query:  122 PHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTD-SADFGDNNLVGWV--KQHAKLKISDVFDPELMKEDPNIEIELLQHL-HVASACLDDRPWRRPTMIQVM 571
            P  IHR+ KS+N+LLD++    VSD G+A L+S+         L    GY  PE+      + K DVYS+GVV+LELLTG++  D   D G+  LV W   + H    ++ + DP L  + P    + L H   V S C+   P  RP M +V+
Sbjct:  600 PPSIHRNFKSANILLDDDIRVHVSDCGLAPLISSGAVSQLSGQLLAAYGYGAPEFEYGI-YTMKCDVYSFGVVMLELLTGRKSYDKKRDRGEQFLVRWAIPQLHDIDALAKMVDPSLKGDYP---AKSLSHFADVISRCVQSEPEYRPLMSEVV 749          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: Y5613_ARATH (Probable receptor-like protein kinase At5g61350 OS=Arabidopsis thaliana GN=At5g61350 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.014e-14
Identity = 57/166 (34.34%), Postives = 92/166 (55.42%), Query Frame = 2
Query:  107 SARGIPH--------IIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDN--NLVGW-VKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVM 571
            SARG+ +        IIHRD+K++N+LLDEN  A+VSDFG+++     + H+S + + G+ GY+ PEY++  + + K DVYS+GVVL E+L   RP  +        NL  + +  H K  +  + DP+++      +  L + +  A  CL +    RP M  V+
Sbjct:  636 SARGLHYLHTGAAQGIIHRDVKTTNILLDENLVAKVSDFGLSKDAPMDEGHVS-TAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCA-RPVINPQLPREQVNLAEYAMNLHRKGMLEKIIDPKIV--GTISKGSLRKFVEAAEKCLAEYGVDRPGMGDVL 797          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: CTR1_ARATH (Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana GN=CTR1 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.014e-14
Identity = 49/157 (31.21%), Postives = 83/157 (52.87%), Query Frame = 2
Query:  122 PHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAK-LKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEI 589
            P I+HRD+KS N+L+D+ +  +V DFG++RL ++  T LS  + AGTP ++ PE  +    + K DVYS+GV+L EL T ++P    +     +V  V    K L+I    +P++                +   C  + PW+RP+   +M + + +
Sbjct:  670 PPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKAS--TFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPW--GNLNPAQVVAAVGFKCKRLEIPRNLNPQVAA--------------IIEGCWTNEPWKRPSFATIMDLLRPL 808          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: Y5168_ARATH (Probably inactive receptor-like protein kinase At5g41680 OS=Arabidopsis thaliana GN=At5g41680 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.325e-14
Identity = 50/161 (31.06%), Postives = 83/161 (51.55%), Query Frame = 2
Query:  131 IHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDN-NLVGWVKQ-HAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGL 607
            +H ++KSSN+  +      + D G+  +  ++       T   + GY  PE   + + +   DVYS+GVVLLELLTGK P       +N +L  W++   +K    +VFD ELM +   IE EL++ L +  AC+  +P  RP +  ++ + ++I     L
Sbjct:  205 VHGNIKSSNIFTNSKCYGCICDLGLTHITKSLP-----QTTLRSSGYHAPEITDTRKSTQFSDVYSFGVVLLELLTGKSPASPLSLDENMDLASWIRSVVSKEWTGEVFDNELMMQ-MGIEEELVEMLQIGLACVALKPQDRPHITHIVKLIQDIPTNFNL 359          
The following BLAST results are available for this feature:
BLAST of DC900011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 291
Match NameE-valueIdentityDescription
Y5332_ARATH1.565e-1532.57Probable inactive receptor kinase At5g53320 OS=Ara... [more]
Y4374_ARATH2.044e-1535.03Probable inactive receptor kinase At4g23740 OS=Ara... [more]
Y1570_ARATH2.044e-1535.86Probable LRR receptor-like serine/threonine-protei... [more]
KPEL_DROME3.487e-1531.90Serine/threonine-protein kinase pelle OS=Drosophil... [more]
Y2214_ARATH4.554e-1537.66Probable receptor-like protein kinase At2g21480 OS... [more]
Y1061_ARATH5.947e-1534.73Probably inactive leucine-rich repeat receptor-lik... [more]
SRF1_ARATH5.947e-1537.01Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsi... [more]
Y5613_ARATH1.014e-1434.34Probable receptor-like protein kinase At5g61350 OS... [more]
CTR1_ARATH1.014e-1431.21Serine/threonine-protein kinase CTR1 OS=Arabidopsi... [more]
Y5168_ARATH1.325e-1431.06Probably inactive receptor-like protein kinase At5... [more]

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Properties
Property NameValue
Genbank descriptionDC900011 VSS Citrus sinensis cDNA clone VS27Q22 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900011 ID=DC900011; Name=DC900011; organism=Citrus sinensis; type=EST; length=850bp
GTTTTTTTTTTTTTTTTTTTAGAGAAAATAGAAATTTTTATATATTAAAA
GGGAAAGGAAGAAACAGACTAGAAAAAAAAAAACTCGAGACTAGCTCGTG
CCGAATTCGGCACGAGGCATCCCACACATTATCCACCGGGATATGAAATC
GAGCAATGTTCTGCTAGACGAAAACTTTGAGGCCAGAGTCTCAGATTTTG
GAATGGCAAGACTAATGAGTGCGATGGATACACATTTGAGTGTCAGTACG
CTAGCAGGCACACCCGGCTATGTCCCTCCCGAATACTATCAAAGCTTTAG
ATGTTCGACGAAAGGCGATGTTTACAGTTATGGTGTAGTTTTGCTCGAGT
TGCTAACGGGAAAAAGGCCAACAGATTCAGCAGATTTCGGTGACAATAAC
CTAGTTGGGTGGGTAAAGCAGCATGCGAAGCTGAAAATAAGCGATGTCTT
TGATCCAGAACTCATGAAAGAGGATCCAAACATCGAGATTGAGCTTCTTC
AACACTTGCATGTAGCGAGTGCTTGCCTGGATGATCGACCATGGAGGAGA
CCGACAATGATTCAGGTTATGGCAATGTTTAAAGAAATCCAAGCCGGTTC
AGGACTTGACTCGCAATCTACTATTGCCACTGATGAAGGAGGTTTCGGTA
CAGTCGAAATGGTAGAGATGAGCATCCAAGAAGCTCCAGAACTAAGCACC
AAGCCTTAGNCCATTCAATTTTCAGGACAAGCATTCTTTCAGTGCCCCAA
AATTTTCCCACTTGAAAACCAAAAAAGTTGCCTTTGGTATCTCTACCATT
TAGTGTATGTAATCTTTGTATCCCTTTTGAAAATTCTTGTTATTTATACA
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