CN185736

Overview
NameCN185736
Unique NameCN185736
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length692
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2795 contig Csv1_Contig2795:25..717. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CN185736 vs. ExPASy Swiss-Prot
Match: Y1567_ARATH (Uncharacterized UDP-glucosyltransferase At1g05670 OS=Arabidopsis thaliana GN=At1g05670 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.448e-12
Identity = 37/102 (36.27%), Postives = 55/102 (53.92%), Query Frame = -3 
Query:  397 HCGWNSTLESMCEGVPMICQPCHGEQMVIARYVSDVWKVGLHLERK----LERGEVERAIRRVMVDAEGREMRNRAAILKEKLDLCTKQGSSSYQSLENLIS 690
            HCGWNSTLE +  GVPMI  P   +Q   A+++ DVWKVG+ ++      + R E  R +  VM   +G+E+R  A   K        +G SS +++   +S
Sbjct:  349 HCGWNSTLEGLSLGVPMIGMPHWADQPTNAKFMEDVWKVGVRVKADSDGFVRREEFVRRVEEVMEAEQGKEIRKNAEKWKVLAQEAVSEGGSSDKNINEFVS 450
[Close]
BLAST of CN185736 vs. ExPASy Swiss-Prot
Match: UGFGT_ARATH (Flavonoid 3-O-glucosyltransferase OS=Arabidopsis thaliana GN=UGT78D2 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.830e-11
Identity = 38/96 (39.58%), Postives = 57/96 (59.38%), Query Frame = -3 
Query:  406 HCGWNSTLESMCEGVPMICQPCHGEQMVIARYVSDVWKVGLH-LERKLERGEVERAIRRVMVDAEGREMRNRAAILKEKLDLCTKQGSSSYQSLEN 690
            HCGWNS LES+  GVPMIC+P  G+Q +  R V  VW++G+  +     +   E+ + +V+V  +G++M+  A  LKE   L  +  SS  +S EN
Sbjct:  356 HCGWNSVLESVSGGVPMICRPFFGDQRLNGRAVEVVWEIGMTIINGVFTKDGFEKCLDKVLVQDDGKKMKCNAKKLKE---LAYEAVSSKGRSSEN 448
The following BLAST results are available for this feature:
BLAST of CN185736 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
Y1567_ARATH7.448e-1236.27Uncharacterized UDP-glucosyltransferase At1g05670 ... [more]
UGFGT_ARATH2.830e-1139.58Flavonoid 3-O-glucosyltransferase OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001M18_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001M18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185736 ID=CN185736; Name=CN185736; organism=Citrus sinensis; type=EST; length=692bp
GAGGCCAACTCACGTCTTTATTCAGCTCACAAATACAAATCCGACTTTTG
ATTTCCTGTAAGGATCAGAAATATCCAACAAATGCACAAACTTCGGACAC
TGTTAATGCAAGAAGACTAGAAGAGAGTGCAGGTCACTATCTTATCAGCT
TTTTCTTCAACACCCCACAATTATTGCAAAAAAAAAAAAATCCCCTTAAA
CAATATAAACTTGGCCTTGCTACGGATTTTGGATAAGTCGTTCAAGTTTC
ACTCCTTGGGTTGGGGAACGCTGATCACATAAATATTCAGAAAGATCTCA
TTGAATACGGCCGGGACATGCCATGTTTTAATTTTCATACTGCCCTTATT
AGAAAGATAGATGTAAGTATTGGAAAATCTAGTATGACAAAATGTAACTA
ATCAAGTTTTCTAGAGATTGATATGAAGAACTGCCTTGCTTTGTACAAAG
ATCCAGTTTTTCCTTCAGAATCGCAGCTCTGTTCCTCATTTCCCGCCCCT
CGGCATCCACCATTACTCGTCTAATTGCCCTTTCAACCTCCCCTCTCTCC
AGCTTCCTTTCCAAATGCAAACCAACTTTCCAAACATCACTAACATATCT
TGCAATCACCATTTGCTCACCATGACAAGGCTGGCATATCATGGGGACAC
CTTCACACATACTTTCCAACGTCGAATTCCAGCCACAATGTG
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