CN185735
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185735 vs. ExPASy Swiss-Prot
Match: RL17_HELMI (50S ribosomal protein L17 OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=rplQ PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.640e-23 Identity = 52/106 (49.06%), Postives = 67/106 (63.21%), Query Frame = -2 Query: 172 KLSRPPDQRRGLFGGLTTQLLKHGRIKTPRARASAVRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALFAEVQERYGERNGGYTRIIRTLPRGGDNPPLAYIE 489 K SRP + RR L +TT LLKHG+I T +A +R+ DKMITL K G LH RRQAL FI E+ +V LF E+ +Y R GGYTR+++ R GD P+ +E Sbjct: 5 KFSRPTNHRRALLRNITTSLLKHGKIVTTEPKAKELRRIADKMITLGKQGDLHARRQALAFIQEESVVTHLFKEIAPKYATRQGGYTRVLKAGFRRGDAAPMCIVE 110
BLAST of CN185735 vs. ExPASy Swiss-Prot
Match: RL17_THEFY (50S ribosomal protein L17 OS=Thermobifida fusca (strain YX) GN=rplQ PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.978e-23 Identity = 54/107 (50.47%), Postives = 66/107 (61.68%), Query Frame = -2 Query: 172 PKLSRPPDQRRGLFGGLTTQLLKHGRIKTPRARASAVRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALFAEVQERYGERNGGYTRIIRTLPRGGDNPPLAYIE 492 P+L P R + L T L +HGRIKT A+A +R Y +K+ITL K G LH RRQ L I +K +VH LF E+ RY RNGGYTRI + R GDN P+A IE Sbjct: 8 PRLGGGPAHERLMLANLATALFRHGRIKTTEAKAKRLRPYAEKLITLGKRGDLHARRQVLTKIRDKAVVHELFTEIGPRYENRNGGYTRITKIGNRKGDNAPMAVIE 114
BLAST of CN185735 vs. ExPASy Swiss-Prot
Match: RL17_MYCSS (50S ribosomal protein L17 OS=Mycobacterium sp. (strain MCS) GN=rplQ PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.978e-23 Identity = 51/107 (47.66%), Postives = 68/107 (63.55%), Query Frame = -2 Query: 172 PKLSRPPDQRRGLFGGLTTQLLKHGRIKTPRARASAVRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALFAEVQERYGERNGGYTRIIRTLPRGGDNPPLAYIE 492 P+L ++ L L T L +HGRIKT +A A+R Y +K+IT AK G LH RR+ + I +K +VH LFAE+ + +R GGYTRII+ PR GDN P+A IE Sbjct: 8 PRLGGSSSHQKALLANLATSLFEHGRIKTTEPKARALRPYAEKLITHAKKGELHNRREVMKKIRDKDVVHTLFAEIGPFFADREGGYTRIIKVEPRKGDNAPMAVIE 114
BLAST of CN185735 vs. ExPASy Swiss-Prot
Match: RL17_MYCSK (50S ribosomal protein L17 OS=Mycobacterium sp. (strain KMS) GN=rplQ PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.978e-23 Identity = 51/107 (47.66%), Postives = 68/107 (63.55%), Query Frame = -2 Query: 172 PKLSRPPDQRRGLFGGLTTQLLKHGRIKTPRARASAVRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALFAEVQERYGERNGGYTRIIRTLPRGGDNPPLAYIE 492 P+L ++ L L T L +HGRIKT +A A+R Y +K+IT AK G LH RR+ + I +K +VH LFAE+ + +R GGYTRII+ PR GDN P+A IE Sbjct: 8 PRLGGSSSHQKALLANLATSLFEHGRIKTTEPKARALRPYAEKLITHAKKGELHNRREVMKKIRDKDVVHTLFAEIGPFFADREGGYTRIIKVEPRKGDNAPMAVIE 114
BLAST of CN185735 vs. ExPASy Swiss-Prot
Match: RL17_MYCSJ (50S ribosomal protein L17 OS=Mycobacterium sp. (strain JLS) GN=rplQ PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.978e-23 Identity = 51/107 (47.66%), Postives = 68/107 (63.55%), Query Frame = -2 Query: 172 PKLSRPPDQRRGLFGGLTTQLLKHGRIKTPRARASAVRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALFAEVQERYGERNGGYTRIIRTLPRGGDNPPLAYIE 492 P+L ++ L L T L +HGRIKT +A A+R Y +K+IT AK G LH RR+ + I +K +VH LFAE+ + +R GGYTRII+ PR GDN P+A IE Sbjct: 8 PRLGGSSSHQKALLANLATSLFEHGRIKTTEPKARALRPYAEKLITHAKKGELHNRREVMKKIRDKDVVHTLFAEIGPFFADREGGYTRIIKVEPRKGDNAPMAVIE 114
BLAST of CN185735 vs. ExPASy Swiss-Prot
Match: RL17_DESAH (50S ribosomal protein L17 OS=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) GN=rplQ PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.978e-23 Identity = 53/114 (46.49%), Postives = 67/114 (58.77%), Query Frame = -2 Query: 172 MRHGRRVPKLSRPPDQRRGLFGGLTTQLLKHGRIKTPRARASAVRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALFAEVQERYGERNGGYTRIIRTLPRGGDNPPLAYIE 513 MRH + KL+R R+ +F + T L KH IKT A+A +RK DKM+TLAK G LH RRQA I EK +VH LF + ++ R GGYTRI + R GD P+ IE Sbjct: 1 MRHRKSGAKLNRTSSHRKAMFRNMVTSLFKHSSIKTTEAKAKELRKLADKMVTLAKRGDLHARRQAFSIIREKDVVHQLFNDAPSKFASRQGGYTRITKLGLRSGDAAPMTTIE 114
BLAST of CN185735 vs. ExPASy Swiss-Prot
Match: RL17_MYCS2 (50S ribosomal protein L17 OS=Mycobacterium smegmatis GN=rplQ PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.303e-22 Identity = 52/107 (48.60%), Postives = 68/107 (63.55%), Query Frame = -2 Query: 172 PKLSRPPDQRRGLFGGLTTQLLKHGRIKTPRARASAVRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALFAEVQERYGERNGGYTRIIRTLPRGGDNPPLAYIE 492 P+L + L L T L +HGRIKT +A A+R Y +K+IT AK G+LH RR+ + I +K +VH LFAE+ Y +RNGGYTRII+ R GDN P+A IE Sbjct: 8 PRLGGSSSHQSALLANLATSLFEHGRIKTTEPKARALRPYAEKLITHAKKGALHNRREVMKKIRDKDVVHTLFAEIGPFYADRNGGYTRIIKVENRKGDNAPMAVIE 114
BLAST of CN185735 vs. ExPASy Swiss-Prot
Match: RL17_CLOB8 (50S ribosomal protein L17 OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=rplQ PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.303e-22 Identity = 53/106 (50.00%), Postives = 65/106 (61.32%), Query Frame = -2 Query: 172 KLSRPPDQRRGLFGGLTTQLLKHGRIKTPRARASAVRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALFAEVQERYGERNGGYTRIIRTLPRGGDNPPLAYIE 489 KL P DQRR + L T LLKHG+I+T RA R +KMITL K G LH RRQ L ++ E+ +V LF V +Y ERNGGYTRII+ PR GD + +E Sbjct: 6 KLGLPTDQRRAMLRNLVTSLLKHGKIETTETRAKETRSIAEKMITLGKRGDLHARRQVLSYVQEELVVKNLFDNVAPKYTERNGGYTRIIKKGPRRGDGAEIVILE 111
BLAST of CN185735 vs. ExPASy Swiss-Prot
Match: RL17_CLOBB (50S ribosomal protein L17 OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=rplQ PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.223e-22 Identity = 54/106 (50.94%), Postives = 65/106 (61.32%), Query Frame = -2 Query: 172 KLSRPPDQRRGLFGGLTTQLLKHGRIKTPRARASAVRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALFAEVQERYGERNGGYTRIIRTLPRGGDNPPLAYIE 489 KL P DQRR + L T LLKHG+I+T RA R +KMITL K G LH RRQAL FI E+ +V LF V +Y ERNGGYTR+ + PR GD + +E Sbjct: 6 KLGLPTDQRRAMLRNLVTSLLKHGKIETTVTRAKETRSIAEKMITLGKRGDLHARRQALAFIQEELVVKNLFDNVAPKYAERNGGYTRMYKKGPRRGDGAEVVILE 111
BLAST of CN185735 vs. ExPASy Swiss-Prot
Match: RL17_CLOBA (50S ribosomal protein L17 OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=rplQ PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.223e-22 Identity = 54/106 (50.94%), Postives = 65/106 (61.32%), Query Frame = -2 Query: 172 KLSRPPDQRRGLFGGLTTQLLKHGRIKTPRARASAVRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALFAEVQERYGERNGGYTRIIRTLPRGGDNPPLAYIE 489 KL P DQRR + L T LLKHG+I+T RA R +KMITL K G LH RRQAL FI E+ +V LF V +Y ERNGGYTR+ + PR GD + +E Sbjct: 6 KLGLPTDQRRAMLRNLVTSLLKHGKIETTVTRAKETRSIAEKMITLGKRGDLHARRQALAFIQEELVVKNLFDNVAPKYAERNGGYTRMYKKGPRRGDGAEVVILE 111 The following BLAST results are available for this feature:
BLAST of CN185735 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185735 ID=CN185735; Name=CN185735; organism=Citrus sinensis; type=EST; length=718bpback to top |