CN185735
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185735 vs. ExPASy Swiss-Prot
Match: RL17_MYCLB (50S ribosomal protein L17 OS=Mycobacterium leprae (strain Br4923) GN=rplQ PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.441e-21 Identity = 50/107 (46.73%), Postives = 69/107 (64.49%), Query Frame = -2 Query: 172 PKLSRPPDQRRGLFGGLTTQLLKHGRIKTPRARASAVRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALFAEVQERYGERNGGYTRIIRTLPRGGDNPPLAYIE 492 P+L ++ L L L +HGRIKT +A A+R Y +K+IT AK G+LH RR+ L + +K +VHALFAE+ + +R+GGYTRII+ R GDN P+A IE Sbjct: 8 PRLGGSSSHQKALLTNLAASLFEHGRIKTTEPKARALRPYAEKLITHAKKGTLHNRREVLKKLPDKDVVHALFAEIGPFFSDRDGGYTRIIKVEARKGDNAPMAVIE 114
BLAST of CN185735 vs. ExPASy Swiss-Prot
Match: RL17_CLONN (50S ribosomal protein L17 OS=Clostridium novyi (strain NT) GN=rplQ PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.441e-21 Identity = 49/106 (46.23%), Postives = 66/106 (62.26%), Query Frame = -2 Query: 172 KLSRPPDQRRGLFGGLTTQLLKHGRIKTPRARASAVRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALFAEVQERYGERNGGYTRIIRTLPRGGDNPPLAYIE 489 KL P D RR + L T LK+G+++T RA R +KMITLAK G LH RRQ L ++ EK++V LFAE+ +Y +RNGGYTR+ + PR GD + +E Sbjct: 6 KLGLPTDHRRAMLRNLVTSFLKNGKVETTITRAKEARNMAEKMITLAKRGDLHARRQVLAYVTEKEVVDHLFAEIAPKYADRNGGYTRMYKMGPRRGDGAEVVILE 111
BLAST of CN185735 vs. ExPASy Swiss-Prot
Match: RL17_MYCA9 (50S ribosomal protein L17 OS=Mycobacterium abscessus (strain ATCC 19977 / DSM 44196) GN=rplQ PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.882e-21 Identity = 50/106 (47.17%), Postives = 66/106 (62.26%), Query Frame = -2 Query: 172 KLSRPPDQRRGLFGGLTTQLLKHGRIKTPRARASAVRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALFAEVQERYGERNGGYTRIIRTLPRGGDNPPLAYIE 489 +L ++ + L T L +HGRIKT +A +R Y +K+IT AK G LH RR+ L I +K +VHALF E+ Y +RNGGYTRII+ R GDN P+A IE Sbjct: 9 RLGGSSSHQKAILANLATALFEHGRIKTTETKARVLRPYAEKLITHAKKGDLHNRREVLKKIRDKDVVHALFEEIGPFYADRNGGYTRIIKVENRKGDNAPMAIIE 114
BLAST of CN185735 vs. ExPASy Swiss-Prot
Match: RL17_GEOMG (50S ribosomal protein L17 OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=rplQ PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.192e-21 Identity = 52/114 (45.61%), Postives = 70/114 (61.40%), Query Frame = -2 Query: 172 MRHGRRVPKLSRPPDQRRGLFGGLTTQLLKHGRIKTPRARASAVRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALFAEVQERYGERNGGYTRIIRTLPRGGDNPPLAYIE 513 MRH + +L R R +F + T L+H RI T A+A +R +KMITL K G LH +RQA +I +K++V LF+ + RY ER+GGYTRII+ R GDN PL+ IE Sbjct: 1 MRHNKAGRRLGRTTSHRIAMFRNMVTSFLEHERITTTDAKAKELRSIAEKMITLGKRGDLHAQRQAASYIRDKKVVTKLFSTIAPRYKERDGGYTRIIKLGIRPGDNAPLSVIE 114
BLAST of CN185735 vs. ExPASy Swiss-Prot
Match: RL17_MYCTU (50S ribosomal protein L17 OS=Mycobacterium tuberculosis GN=rplQ PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.475e-21 Identity = 48/107 (44.86%), Postives = 68/107 (63.55%), Query Frame = -2 Query: 172 PKLSRPPDQRRGLFGGLTTQLLKHGRIKTPRARASAVRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALFAEVQERYGERNGGYTRIIRTLPRGGDNPPLAYIE 492 P+L ++ + L T L +HGRI T +A A+R Y +K+IT AK G+LH RR+ L + +K +VH LFAE+ + +R+GGYTRII+ R GDN P+A IE Sbjct: 8 PRLGGSSSHQKAILANLATSLFEHGRITTTEPKARALRPYAEKLITHAKKGALHNRREVLKKLRDKDVVHTLFAEIGPFFADRDGGYTRIIKIEARKGDNAPMAVIE 114
BLAST of CN185735 vs. ExPASy Swiss-Prot
Match: RL17_MYCTA (50S ribosomal protein L17 OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=rplQ PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.475e-21 Identity = 48/107 (44.86%), Postives = 68/107 (63.55%), Query Frame = -2 Query: 172 PKLSRPPDQRRGLFGGLTTQLLKHGRIKTPRARASAVRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALFAEVQERYGERNGGYTRIIRTLPRGGDNPPLAYIE 492 P+L ++ + L T L +HGRI T +A A+R Y +K+IT AK G+LH RR+ L + +K +VH LFAE+ + +R+GGYTRII+ R GDN P+A IE Sbjct: 8 PRLGGSSSHQKAILANLATSLFEHGRITTTEPKARALRPYAEKLITHAKKGALHNRREVLKKLRDKDVVHTLFAEIGPFFADRDGGYTRIIKIEARKGDNAPMAVIE 114
BLAST of CN185735 vs. ExPASy Swiss-Prot
Match: RL17_MYCBT (50S ribosomal protein L17 OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=rplQ PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.475e-21 Identity = 48/107 (44.86%), Postives = 68/107 (63.55%), Query Frame = -2 Query: 172 PKLSRPPDQRRGLFGGLTTQLLKHGRIKTPRARASAVRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALFAEVQERYGERNGGYTRIIRTLPRGGDNPPLAYIE 492 P+L ++ + L T L +HGRI T +A A+R Y +K+IT AK G+LH RR+ L + +K +VH LFAE+ + +R+GGYTRII+ R GDN P+A IE Sbjct: 8 PRLGGSSSHQKAILANLATSLFEHGRITTTEPKARALRPYAEKLITHAKKGALHNRREVLKKLRDKDVVHTLFAEIGPFFADRDGGYTRIIKIEARKGDNAPMAVIE 114
BLAST of CN185735 vs. ExPASy Swiss-Prot
Match: RL17_MYCBP (50S ribosomal protein L17 OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=rplQ PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.475e-21 Identity = 48/107 (44.86%), Postives = 68/107 (63.55%), Query Frame = -2 Query: 172 PKLSRPPDQRRGLFGGLTTQLLKHGRIKTPRARASAVRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALFAEVQERYGERNGGYTRIIRTLPRGGDNPPLAYIE 492 P+L ++ + L T L +HGRI T +A A+R Y +K+IT AK G+LH RR+ L + +K +VH LFAE+ + +R+GGYTRII+ R GDN P+A IE Sbjct: 8 PRLGGSSSHQKAILANLATSLFEHGRITTTEPKARALRPYAEKLITHAKKGALHNRREVLKKLRDKDVVHTLFAEIGPFFADRDGGYTRIIKIEARKGDNAPMAVIE 114
BLAST of CN185735 vs. ExPASy Swiss-Prot
Match: RL17_MYCBO (50S ribosomal protein L17 OS=Mycobacterium bovis GN=rplQ PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.475e-21 Identity = 48/107 (44.86%), Postives = 68/107 (63.55%), Query Frame = -2 Query: 172 PKLSRPPDQRRGLFGGLTTQLLKHGRIKTPRARASAVRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALFAEVQERYGERNGGYTRIIRTLPRGGDNPPLAYIE 492 P+L ++ + L T L +HGRI T +A A+R Y +K+IT AK G+LH RR+ L + +K +VH LFAE+ + +R+GGYTRII+ R GDN P+A IE Sbjct: 8 PRLGGSSSHQKAILANLATSLFEHGRITTTEPKARALRPYAEKLITHAKKGALHNRREVLKKLRDKDVVHTLFAEIGPFFADRDGGYTRIIKIEARKGDNAPMAVIE 114
BLAST of CN185735 vs. ExPASy Swiss-Prot
Match: RL17_DESPS (50S ribosomal protein L17 OS=Desulfotalea psychrophila GN=rplQ PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.151e-21 Identity = 52/114 (45.61%), Postives = 68/114 (59.65%), Query Frame = -2 Query: 172 MRHGRRVPKLSRPPDQRRGLFGGLTTQLLKHGRIKTPRARASAVRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALFAEVQERYGERNGGYTRIIRTLPRGGDNPPLAYIE 513 MRH KL R R +F + T L +H RI T + +A +R +KMITL K G LH RRQAL ++ +VH LF E+ E++ +R GGYTRII+T R GDN +A IE Sbjct: 1 MRHRYSGRKLGRTSSHRDAMFRNMVTSLFEHERIVTTKEKAKELRPIAEKMITLGKRGDLHARRQALSYVRCAGVVHKLFGEIAEQFADRKGGYTRIIQTGVRRGDNASMAIIE 114 The following BLAST results are available for this feature:
BLAST of CN185735 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185735 ID=CN185735; Name=CN185735; organism=Citrus sinensis; type=EST; length=718bpback to top |