CN185728
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185728 vs. ExPASy Swiss-Prot
Match: CH60_LACCB (60 kDa chaperonin OS=Lactobacillus casei (strain BL23) GN=groL PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.641e-35 Identity = 70/121 (57.85%), Postives = 90/121 (74.38%), Query Frame = 1 Query: 337 LVPRAGMFVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE-DSELADVAAVS 696 L P+ VL+ YG+P+I NDGVT+AK ++LED EN+GAKLV + A+KTND+AGDGTTT+ VLAQ +I EG+K V AGANPV I GIEK +KA V EL ++S +V E+A VA+VS Sbjct: 30 LGPKGRNVVLDKSYGSPEITNDGVTIAKSIDLEDHYENMGAKLVAEVASKTNDIAGDGTTTATVLAQSIIREGMKNVTAGANPVGIRTGIEKATKAAVDELHKISHKVNGKKEIAQVASVS 150 HSP 2 Score: 36.965 bits (84), Expect = 1.641e-35 Identity = 19/38 (50.00%), Postives = 27/38 (71.05%), Query Frame = 3 Query: 246 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNV 359 AK++ F++D A + GV++LA+ V TLGPKGRNV Sbjct: 2 AKEIKFSEDARAA--MLRGVDQLANTVKTTLGPKGRNV 37
BLAST of CN185728 vs. ExPASy Swiss-Prot
Match: CH60_LACC3 (60 kDa chaperonin OS=Lactobacillus casei (strain ATCC 334) GN=groL PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.641e-35 Identity = 70/121 (57.85%), Postives = 90/121 (74.38%), Query Frame = 1 Query: 337 LVPRAGMFVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE-DSELADVAAVS 696 L P+ VL+ YG+P+I NDGVT+AK ++LED EN+GAKLV + A+KTND+AGDGTTT+ VLAQ +I EG+K V AGANPV I GIEK +KA V EL ++S +V E+A VA+VS Sbjct: 30 LGPKGRNVVLDKSYGSPEITNDGVTIAKSIDLEDHYENMGAKLVAEVASKTNDIAGDGTTTATVLAQSIIREGMKNVTAGANPVGIRTGIEKATKAAVDELHKISHKVNGKKEIAQVASVS 150 HSP 2 Score: 36.965 bits (84), Expect = 1.641e-35 Identity = 19/38 (50.00%), Postives = 27/38 (71.05%), Query Frame = 3 Query: 246 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNV 359 AK++ F++D A + GV++LA+ V TLGPKGRNV Sbjct: 2 AKEIKFSEDARAA--MLRGVDQLANTVKTTLGPKGRNV 37
BLAST of CN185728 vs. ExPASy Swiss-Prot
Match: CH60_LACBA (60 kDa chaperonin OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=groL PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.137e-35 Identity = 67/121 (55.37%), Postives = 87/121 (71.90%), Query Frame = 1 Query: 337 LVPRAGMFVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE-DSELADVAAVS 696 L P+ VLE YG P I NDGVT+AK +ELED EN+GAKLV + A+KTND+AGDGTTT+ VL Q ++ EG+K V AGANPV I RGIEK + A V L +MS +V+ ++A +A++S Sbjct: 30 LGPKGRNVVLEQSYGNPTITNDGVTIAKAIELEDHFENMGAKLVSEVASKTNDIAGDGTTTATVLTQAIVNEGMKNVTAGANPVGIRRGIEKATGAAVDALHKMSHDVKTKDDIAQIASIS 150 HSP 2 Score: 41.2022 bits (95), Expect = 2.137e-35 Identity = 22/38 (57.89%), Postives = 28/38 (73.68%), Query Frame = 3 Query: 246 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNV 359 AK+L F++D A K+ GV+KLA+ V TLGPKGRNV Sbjct: 2 AKELKFSED--ARSKMLAGVDKLANTVKTTLGPKGRNV 37
BLAST of CN185728 vs. ExPASy Swiss-Prot
Match: CH602_ANASP (60 kDa chaperonin 2 OS=Anabaena sp. (strain PCC 7120) GN=groL2 PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.189e-35 Identity = 72/124 (58.06%), Postives = 99/124 (79.84%), Query Frame = 1 Query: 325 LELPLVPRAGMFVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDSELADVAAVS 696 +++ L P+ +LE KYG P+IVNDG+TVAKE+ELEDP+EN GA+L+++ A+KT D+AGDGTTT+ VL Q LI EG+K VAAG NPV + RGI+KT++ALV+E+ +++K VE S +A VA VS Sbjct: 26 VKITLGPKGRNVLLEKKYGTPQIVNDGITVAKEIELEDPLENTGARLIQEVASKTKDVAGDGTTTATVLVQALIREGLKNVAAGTNPVSLKRGIDKTTEALVAEIAKVAKPVEGSAIAQVATVS 149
BLAST of CN185728 vs. ExPASy Swiss-Prot
Match: CH601_TRIEI (60 kDa chaperonin 1 OS=Trichodesmium erythraeum (strain IMS101) GN=groL1 PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 2.859e-35 Identity = 72/124 (58.06%), Postives = 96/124 (77.42%), Query Frame = 1 Query: 325 LELPLVPRAGMFVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDSELADVAAVS 696 + + + P+ +LE KYGAP+IVNDG+TVAK++ELEDP+EN GAKL+++ A+KT D+AGDGTTT+ VLAQ +I EG+K VAAGANPV + RGIEKT LV E++ ++K VE +A VA VS Sbjct: 26 VRITMGPKGRNVLLEKKYGAPQIVNDGITVAKDIELEDPLENTGAKLIQEVASKTKDIAGDGTTTATVLAQSMIKEGLKNVAAGANPVAVRRGIEKTVSLLVKEIQTVAKPVEGEAIAQVATVS 149
BLAST of CN185728 vs. ExPASy Swiss-Prot
Match: CH601_ACAM1 (60 kDa chaperonin 1 OS=Acaryochloris marina (strain MBIC 11017) GN=groL1 PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 2.859e-35 Identity = 74/124 (59.68%), Postives = 96/124 (77.42%), Query Frame = 1 Query: 325 LELPLVPRAGMFVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDSELADVAAVS 696 + + L P+ VLE K+GAP+I+NDGVT+AKEVELEDP+EN GA+L+R+ A+KTND+AGDGTTT+ VLAQ LI EG+K VAAGANPV + +GI+KT ALV E++ SK V +A VA +S Sbjct: 26 VRITLGPKGRNVVLEKKFGAPQIINDGVTIAKEVELEDPLENAGAQLMREVASKTNDVAGDGTTTATVLAQALIREGLKNVAAGANPVALRKGIDKTIDALVKEIEAKSKPVAGDAIAQVATIS 149
BLAST of CN185728 vs. ExPASy Swiss-Prot
Match: CH60_EUBE2 (60 kDa chaperonin OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=groL PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 3.626e-35 Identity = 63/119 (52.94%), Postives = 90/119 (75.63%), Query Frame = 1 Query: 343 PRAGMFVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE-DSELADVAAVS 696 P+ VL+ YGAP I NDGVT+AK++ELED EN+GA+LV++ AAKTND+AGDGTTT+ VLAQ +I EG+K +AAGANP+++ +G++K + V + MS++V ++A VAA+S Sbjct: 32 PKGRNVVLDKSYGAPLITNDGVTIAKDIELEDAFENMGAQLVKEVAAKTNDVAGDGTTTATVLAQAMINEGMKNLAAGANPIVLRKGMKKATDCAVEAIAGMSEKVTGKDQIAKVAAIS 150 HSP 2 Score: 41.2022 bits (95), Expect = 3.626e-35 Identity = 21/38 (55.26%), Postives = 28/38 (73.68%), Query Frame = 3 Query: 246 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNV 359 AK++ + + A K L+ GVNKLA+ V VT+GPKGRNV Sbjct: 2 AKEIKYGIE--ARKALEEGVNKLANTVRVTIGPKGRNV 37
BLAST of CN185728 vs. ExPASy Swiss-Prot
Match: CH602_GLOVI (60 kDa chaperonin 2 OS=Gloeobacter violaceus GN=groL2 PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 3.734e-35 Identity = 74/125 (59.20%), Postives = 100/125 (80.00%), Query Frame = 1 Query: 325 LELPLVPRAGMFVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDSE-LADVAAVS 696 + + L P+ VLE K+GAP+IVNDGVT+AKE+ELEDP+EN GA+L+R+ A+KTND+AGDGTTT+ VLAQ LI EG++ VAAGANP+ + RG+EKT LV E+ M+K VED++ +A+VA +S Sbjct: 26 VRVTLGPKGRNVVLEKKFGAPQIVNDGVTIAKEIELEDPLENTGAQLIREVASKTNDVAGDGTTTATVLAQALIREGLRNVAAGANPMSLKRGMEKTVAKLVQEIAAMAKPVEDNKTIAEVATIS 150
BLAST of CN185728 vs. ExPASy Swiss-Prot
Match: CH602_ANASL (60 kDa chaperonin 2 OS=Anabaena sp. (strain L31) GN=groL2 PE=1 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 3.734e-35 Identity = 72/124 (58.06%), Postives = 98/124 (79.03%), Query Frame = 1 Query: 325 LELPLVPRAGMFVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDSELADVAAVS 696 +++ L P+ +LE KYG P+IVNDG+TVAKE+ELEDP+EN GA+L+++ A+KT D+AGDGTTT+ VL Q LI EG+K VAAG NPV + RGI+KT++ALV E+ +++K VE S +A VA VS Sbjct: 26 VKITLGPKGRNVLLEKKYGTPQIVNDGITVAKEIELEDPLENTGARLIQEVASKTKDVAGDGTTTATVLVQALIKEGLKNVAAGINPVSLKRGIDKTTEALVEEIAKVAKPVEGSAIAQVATVS 149
BLAST of CN185728 vs. ExPASy Swiss-Prot
Match: CH60_MYCGE (60 kDa chaperonin OS=Mycoplasma genitalium GN=groL PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.306e-34 Identity = 61/119 (51.26%), Postives = 85/119 (71.43%), Query Frame = 1 Query: 343 PRAGMFVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE-DSELADVAAVS 696 P+ +LE K+ P I NDGVT+AKE+EL DPVENIGAK++ AA TND+AGDGTTT+ +LAQ + G++++ GANPV I RGIE S ++ EL++ SK++ + E+ VAA+S Sbjct: 32 PKGQNVILERKFANPLITNDGVTIAKEIELSDPVENIGAKVISVAAVSTNDIAGDGTTTATILAQEMTNRGIEIINKGANPVNIRRGIEDASLLIIKELEKYSKKINTNEEIEQVAAIS 150 HSP 2 Score: 41.2022 bits (95), Expect = 2.306e-34 Identity = 21/38 (55.26%), Postives = 28/38 (73.68%), Query Frame = 3 Query: 246 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNV 359 AK+L F KD A +L G+NK+A+ V VT+GPKG+NV Sbjct: 2 AKELIFGKD--ARTRLLQGINKIANAVKVTVGPKGQNV 37 The following BLAST results are available for this feature:
BLAST of CN185728 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185728 ID=CN185728; Name=CN185728; organism=Citrus sinensis; type=EST; length=698bpback to top |