CN185728
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185728 vs. ExPASy Swiss-Prot
Match: CH60_ALKMQ (60 kDa chaperonin OS=Alkaliphilus metalliredigens (strain QYMF) GN=groL PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.468e-31 Identity = 67/125 (53.60%), Postives = 95/125 (76.00%), Query Frame = 1 Query: 325 LELPLVPRAGMFVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDSE-LADVAAVS 696 +++ L P+ V++ K+G+P I NDGVT+A+E+ELED EN+GA+LV++ A KTND+AGDGTTT+ +LAQ +I EG+K VAAGANP++I +GI K A V+ELK +SK +E E +A V A+S Sbjct: 26 VKVTLGPKGRNVVIDKKFGSPLITNDGVTIAREIELEDAYENMGAQLVKEVATKTNDVAGDGTTTATLLAQAIIREGLKNVAAGANPMIIKKGIHKAVDAAVAELKAVSKSIESKEAIAQVGAIS 150
BLAST of CN185728 vs. ExPASy Swiss-Prot
Match: CH601_SYNY3 (60 kDa chaperonin 1 OS=Synechocystis sp. (strain PCC 6803) GN=groL1 PE=1 SV=4) HSP 1 Score: 136.346 bits (342), Expect = 1.468e-31 Identity = 66/121 (54.55%), Postives = 94/121 (77.69%), Query Frame = 1 Query: 337 LVPRAGMFVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDSE-LADVAAVS 696 L P+ VLE K+G+P+I+NDG+T+AKE+ELED VEN G L+RQAA+KTND+AGDGTTT+ VLA ++ EG++ VAAGANP+ + RGI+K + LV+ +K+ ++ V DS+ +A V A+S Sbjct: 30 LGPKGRNVVLEKKFGSPQIINDGITIAKEIELEDHVENTGVSLIRQAASKTNDVAGDGTTTATVLAHAIVKEGLRNVAAGANPISLKRGIDKATDFLVARIKEHAQPVGDSKAIAQVGAIS 150
BLAST of CN185728 vs. ExPASy Swiss-Prot
Match: CH60_TERTT (60 kDa chaperonin OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=groL PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.702e-31 Identity = 58/121 (47.93%), Postives = 85/121 (70.25%), Query Frame = 1 Query: 337 LVPRAGMFVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDSE-LADVAAVS 696 L P+ VL+ +GAP + DGV+VAKE+EL+D EN+GA++V++ A+K +D AGDGTTT+ VLAQ ++ EG+K VAAG NP+ + RGI+K A V +K ++ EDS+ +A V +S Sbjct: 31 LGPKGRNVVLDKAFGAPTVTKDGVSVAKEIELKDKFENMGAQMVKEVASKASDDAGDGTTTATVLAQAIVNEGLKSVAAGMNPMDLKRGIDKAVAAAVEFVKSSAQPCEDSKSIAQVGTIS 151 HSP 2 Score: 43.1282 bits (100), Expect = 1.702e-31 Identity = 24/39 (61.54%), Postives = 27/39 (69.23%), Query Frame = 3 Query: 243 AAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNV 359 AAKD+ F D A +K+ GVN LAD V TLGPKGRNV Sbjct: 2 AAKDVKFGDD--ARQKMLVGVNVLADAVKTTLGPKGRNV 38
BLAST of CN185728 vs. ExPASy Swiss-Prot
Match: CH60_THEPX (60 kDa chaperonin OS=Thermoanaerobacter sp. (strain X514) GN=groL PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.918e-31 Identity = 66/125 (52.80%), Postives = 96/125 (76.80%), Query Frame = 1 Query: 325 LELPLVPRAGMFVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDSE-LADVAAVS 696 +++ L PR VL+ KYG+P + NDGVT+A+E+ELEDP EN GA+L+++ A KTND+AGDGTTT+ +LAQ ++ EG+K +AAGANP+L+ RGI K A V LK++SK +++ E +A VA++S Sbjct: 26 VKVTLGPRGRNVVLDKKYGSPTVTNDGVTIAREIELEDPFENQGAQLLKEVATKTNDVAGDGTTTATLLAQAMVREGLKNLAAGANPMLLRRGIAKAVDAAVEGLKRISKPIDNKESIAHVASIS 150
BLAST of CN185728 vs. ExPASy Swiss-Prot
Match: CH60_THEP3 (60 kDa chaperonin OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=groL PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.918e-31 Identity = 66/125 (52.80%), Postives = 96/125 (76.80%), Query Frame = 1 Query: 325 LELPLVPRAGMFVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDSE-LADVAAVS 696 +++ L PR VL+ KYG+P + NDGVT+A+E+ELEDP EN GA+L+++ A KTND+AGDGTTT+ +LAQ ++ EG+K +AAGANP+L+ RGI K A V LK++SK +++ E +A VA++S Sbjct: 26 VKVTLGPRGRNVVLDKKYGSPTVTNDGVTIAREIELEDPFENQGAQLLKEVATKTNDVAGDGTTTATLLAQAMVREGLKNLAAGANPMLLRRGIAKAVDAAVEGLKRISKPIDNKESIAHVASIS 150
BLAST of CN185728 vs. ExPASy Swiss-Prot
Match: CH60_THEM4 (60 kDa chaperonin OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=groL PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.918e-31 Identity = 65/125 (52.00%), Postives = 97/125 (77.60%), Query Frame = 1 Query: 325 LELPLVPRAGMFVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVS 696 +++ L P+ V+E +G+P I NDGV++AKE+ELED EN+GA+LV++ A+KTND+AGDGTTT+ VLAQ +I EG+K V AGANP+L+ RGI+K A V ++K +SK++ +S ++A VA++S Sbjct: 26 VKITLGPKGRNVVIEKSWGSPTITNDGVSIAKEIELEDKFENLGAQLVKEVASKTNDVAGDGTTTATVLAQAMIKEGIKNVTAGANPILVKRGIDKAVAAAVEKIKDISKKLSNSDDIAHVASIS 150
BLAST of CN185728 vs. ExPASy Swiss-Prot
Match: CH60_TROWT (60 kDa chaperonin OS=Tropheryma whipplei (strain Twist) GN=groL PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.504e-31 Identity = 70/125 (56.00%), Postives = 96/125 (76.80%), Query Frame = 1 Query: 325 LELPLVPRAGMFVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE-DSELADVAAVS 696 +++ L PR VLE K+GAP I NDGVT+AKE+EL+DP E IGA+LV++ A KT+D+AGDGTTTSVVLAQ ++ EG+K VAAGA+P+ + RGIEK+ A+ L +KEVE ++E+A A++S Sbjct: 26 VKVTLGPRGRNVVLEKKWGAPVITNDGVTIAKEIELDDPYEKIGAELVKEVAKKTDDVAGDGTTTSVVLAQAMVREGLKNVAAGADPISLRRGIEKSVAAVSKALLTSAKEVETEAEIAACASIS 150
BLAST of CN185728 vs. ExPASy Swiss-Prot
Match: CH60_TROWH (60 kDa chaperonin OS=Tropheryma whipplei GN=groL PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.504e-31 Identity = 70/125 (56.00%), Postives = 96/125 (76.80%), Query Frame = 1 Query: 325 LELPLVPRAGMFVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE-DSELADVAAVS 696 +++ L PR VLE K+GAP I NDGVT+AKE+EL+DP E IGA+LV++ A KT+D+AGDGTTTSVVLAQ ++ EG+K VAAGA+P+ + RGIEK+ A+ L +KEVE ++E+A A++S Sbjct: 26 VKVTLGPRGRNVVLEKKWGAPVITNDGVTIAKEIELDDPYEKIGAELVKEVAKKTDDVAGDGTTTSVVLAQAMVREGLKNVAAGADPISLRRGIEKSVAAVSKALLTSAKEVETEAEIAACASIS 150
BLAST of CN185728 vs. ExPASy Swiss-Prot
Match: CH60_TROW8 (60 kDa chaperonin OS=Tropheryma whipplei (strain TW08/27) GN=groL PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.504e-31 Identity = 70/125 (56.00%), Postives = 96/125 (76.80%), Query Frame = 1 Query: 325 LELPLVPRAGMFVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE-DSELADVAAVS 696 +++ L PR VLE K+GAP I NDGVT+AKE+EL+DP E IGA+LV++ A KT+D+AGDGTTTSVVLAQ ++ EG+K VAAGA+P+ + RGIEK+ A+ L +KEVE ++E+A A++S Sbjct: 26 VKVTLGPRGRNVVLEKKWGAPVITNDGVTIAKEIELDDPYEKIGAELVKEVAKKTDDVAGDGTTTSVVLAQAMVREGLKNVAAGADPISLRRGIEKSVAAVSKALLTSAKEVETEAEIAACASIS 150
BLAST of CN185728 vs. ExPASy Swiss-Prot
Match: CH60_THETN (60 kDa chaperonin OS=Thermoanaerobacter tengcongensis GN=groL PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.504e-31 Identity = 66/125 (52.80%), Postives = 97/125 (77.60%), Query Frame = 1 Query: 325 LELPLVPRAGMFVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDSE-LADVAAVS 696 +++ L PR VL+ KYG P + NDGVT+A+E+ELEDP EN GA+L+++AA KTND+AGDGTTT+ +LAQ ++ EG+K +AAGANP+L+ RG+ K +A V L+++SK +++ E +A VAA+S Sbjct: 26 VKVTLGPRGRNVVLDKKYGTPTVTNDGVTIAREIELEDPFENQGAQLLKEAATKTNDVAGDGTTTATLLAQVMVLEGLKNLAAGANPMLLRRGMAKAVEAAVEGLRRISKPIDNKESIAHVAAIS 150 The following BLAST results are available for this feature:
BLAST of CN185728 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185728 ID=CN185728; Name=CN185728; organism=Citrus sinensis; type=EST; length=698bpback to top |