CN185728
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185728 vs. ExPASy Swiss-Prot
Match: CH60_AKKM8 (60 kDa chaperonin OS=Akkermansia muciniphila (strain ATCC BAA-835) GN=groL PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.909e-33 Identity = 67/121 (55.37%), Postives = 92/121 (76.03%), Query Frame = 1 Query: 337 LVPRAGMFVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVS 696 L P V++ K+G+P I DGVTVAKE+ELEDP EN+GA+LVR+ ++KTND+AGDGTTT+ VLA+ + EG++ V AGANP+ + RGI K + ++V ELK++SK V+ S E+A VA VS Sbjct: 30 LGPAGRNVVIDKKFGSPLITKDGVTVAKEIELEDPFENMGAQLVREVSSKTNDVAGDGTTTATVLAESIYREGLRNVTAGANPISLQRGIMKAADSVVEELKKISKPVDSSKEVAQVATVS 150 HSP 2 Score: 30.8018 bits (68), Expect = 1.909e-33 Identity = 18/38 (47.37%), Postives = 22/38 (57.89%), Query Frame = 3 Query: 246 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNV 359 AK + F D A + L GV ++A V TLGP GRNV Sbjct: 2 AKQIQF--DETARQALLRGVEQIAKAVKSTLGPAGRNV 37
BLAST of CN185728 vs. ExPASy Swiss-Prot
Match: CH60_MYCPN (60 kDa chaperonin OS=Mycoplasma pneumoniae GN=groL PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 1.909e-33 Identity = 60/119 (50.42%), Postives = 84/119 (70.59%), Query Frame = 1 Query: 343 PRAGMFVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE-DSELADVAAVS 696 P+ +L K+ P I NDGVT+AKE+EL DP+ENIGAK++ AA TND+AGDGTTT+ +LAQ + GV+ V GANPV + RGIE S+ +++EL + SK++ + E+ VAA+S Sbjct: 32 PKGQNVILGRKFSNPLITNDGVTIAKEIELTDPLENIGAKVISVAAVSTNDIAGDGTTTATILAQEMTNRGVEAVNNGANPVNVRRGIEDASQLIITELDKRSKKINTNEEIEQVAAIS 150 HSP 2 Score: 42.743 bits (99), Expect = 1.909e-33 Identity = 23/38 (60.53%), Postives = 28/38 (73.68%), Query Frame = 3 Query: 246 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNV 359 AK+L F K+ A KL G+NKLAD V VT+GPKG+NV Sbjct: 2 AKELVFGKN--ARNKLLAGINKLADAVKVTVGPKGQNV 37
BLAST of CN185728 vs. ExPASy Swiss-Prot
Match: CH60_ANATD (60 kDa chaperonin OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=groL PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.049e-33 Identity = 68/125 (54.40%), Postives = 100/125 (80.00%), Query Frame = 1 Query: 325 LELPLVPRAGMFVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDSE-LADVAAVS 696 +++ L P+ VLE K+G+P+IVNDGVT+AKE+ELEDP EN+GA++VR+ A+KTND+AGDGTTT+ VLAQ +I EG+K +AAGANP+++ +GI+K +V E+++MSK+V E + VA++S Sbjct: 27 VKVTLGPKGRNVVLEKKFGSPQIVNDGVTIAKEIELEDPFENMGAQIVREVASKTNDIAGDGTTTATVLAQAMIREGLKNIAAGANPMILRKGIQKAVDVVVEEIRKMSKKVRGKEDITYVASIS 151
BLAST of CN185728 vs. ExPASy Swiss-Prot
Match: CH602_MOOTA (60 kDa chaperonin 2 OS=Moorella thermoacetica (strain ATCC 39073) GN=groL2 PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.049e-33 Identity = 74/131 (56.49%), Postives = 97/131 (74.05%), Query Frame = 1 Query: 307 TSLQI*LELPLVPRAGMFVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDSE-LADVAAVS 696 T L + + L PR VLE K+GAP I NDGVT+AKEVELEDP+EN+GA LVR+ A+KTND+AGDGTTT+ VLAQ ++ EG+K VAAGANP+ + RGIEK A+V LK ++ VE + ++ VA++S Sbjct: 20 TKLTEAVRVTLGPRGRNVVLEKKFGAPTITNDGVTIAKEVELEDPLENVGALLVREVASKTNDVAGDGTTTACVLAQAIVREGMKNVAAGANPMFMKRGIEKAVAAVVENLKAQARPVETKDSISQVASIS 150
BLAST of CN185728 vs. ExPASy Swiss-Prot
Match: CH601_GLOVI (60 kDa chaperonin 1 OS=Gloeobacter violaceus GN=groL1 PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.049e-33 Identity = 71/125 (56.80%), Postives = 102/125 (81.60%), Query Frame = 1 Query: 325 LELPLVPRAGMFVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDSE-LADVAAVS 696 + + L P+ VLE K+GAP+I+NDGVT+AKE+ELE+ +EN GA+L+++ A+KTND+AGDGTTT+ VLAQ L+ EG+K VAAG+NP+ + RG+EKT + LV+EL++++K VE S+ +A VAAVS Sbjct: 26 VRVTLGPKGRNVVLEKKFGAPQIINDGVTIAKEIELENKLENTGAQLIKEVASKTNDVAGDGTTTACVLAQSLVKEGLKNVAAGSNPMNLKRGMEKTVRHLVAELEKVAKPVEGSQAIAQVAAVS 150
BLAST of CN185728 vs. ExPASy Swiss-Prot
Match: CH602_SYNJA (60 kDa chaperonin 2 OS=Synechococcus sp. (strain JA-3-3Ab) GN=groL2 PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.676e-33 Identity = 71/121 (58.68%), Postives = 94/121 (77.69%), Query Frame = 1 Query: 337 LVPRAGMFVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDSE-LADVAAVS 696 L P+ VLE K+GAP+IVNDGVT+AKE+ELED +EN G L+RQAA+KTND AGDGTTT+ VLA ++ EG+K VAAGANP+ + RGI+K K LV ++ + ++ VEDS+ +A VAA+S Sbjct: 30 LGPKGRNVVLEKKFGAPQIVNDGVTIAKEIELEDHIENTGVSLIRQAASKTNDTAGDGTTTATVLAHAMVKEGLKNVAAGANPIALKRGIDKAVKFLVDKIAEHARPVEDSKAIAQVAAIS 150
BLAST of CN185728 vs. ExPASy Swiss-Prot
Match: CH602_ROSCS (60 kDa chaperonin 2 OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=groL2 PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 3.239e-33 Identity = 63/121 (52.07%), Postives = 94/121 (77.69%), Query Frame = 1 Query: 337 LVPRAGMFVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED-SELADVAAVS 696 L PR + K+G+P + +DGVTVAKEVEL+DP EN+GA+L+++AA+KTND+AGDGTTT+ VLAQ +I EG+K+VAAGANP+++ RG++K +ALV+ +K+ + ++ E+ VA +S Sbjct: 30 LGPRGRNVAMGKKWGSPAVTHDGVTVAKEVELKDPFENMGAQLLKEAASKTNDVAGDGTTTATVLAQAMIDEGLKLVAAGANPMILKRGLDKGREALVARIKEQAISLKSRDEIRQVATIS 150 HSP 2 Score: 32.7278 bits (73), Expect = 3.239e-33 Identity = 18/38 (47.37%), Postives = 25/38 (65.79%), Query Frame = 3 Query: 246 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNV 359 AK + FN+ A L++GV+ +A V TLGP+GRNV Sbjct: 2 AKQIIFNEQARAA--LKHGVDTMALAVKTTLGPRGRNV 37
BLAST of CN185728 vs. ExPASy Swiss-Prot
Match: CH601_SYNJB (60 kDa chaperonin 1 OS=Synechococcus sp. GN=groL1 PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.495e-33 Identity = 70/121 (57.85%), Postives = 94/121 (77.69%), Query Frame = 1 Query: 337 LVPRAGMFVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDSE-LADVAAVS 696 L P+ VLE K+GAP+I+NDGVT+AKE+ELED +EN G L+RQAA+KTND AGDGTTT+ VLA ++ EG+K VAAGANP+ + RGI+K K LV ++ + ++ VEDS+ +A VAA+S Sbjct: 30 LGPKGRNVVLEKKFGAPQIINDGVTIAKEIELEDHIENTGVSLIRQAASKTNDTAGDGTTTATVLAHAMVKEGLKNVAAGANPIALKRGIDKAVKFLVDKIAEHARPVEDSKAIAQVAAIS 150
BLAST of CN185728 vs. ExPASy Swiss-Prot
Match: CH60_DESRM (60 kDa chaperonin OS=Desulfotomaculum reducens (strain MI-1) GN=groL PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.564e-33 Identity = 71/125 (56.80%), Postives = 95/125 (76.00%), Query Frame = 1 Query: 325 LELPLVPRAGMFVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDSE-LADVAAVS 696 +++ L P+ V+E K+GAP I NDGVT+A+E+ELED EN+GA+LV++ A KTND+AGDGTTT+ VLAQ L+ EG+K VAAGANP++I RGIEK + V E+K M+K +E E +A VA VS Sbjct: 26 VKVTLGPKGRNVVIEKKFGAPTITNDGVTIAREIELEDNFENMGAQLVKEVATKTNDVAGDGTTTATVLAQALVREGLKNVAAGANPMIIKRGIEKAVEKAVEEIKAMAKPIESKEAIAQVATVS 150
BLAST of CN185728 vs. ExPASy Swiss-Prot
Match: CH60_CARHZ (60 kDa chaperonin OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=groL PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 5.961e-33 Identity = 69/125 (55.20%), Postives = 98/125 (78.40%), Query Frame = 1 Query: 325 LELPLVPRAGMFVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDSE-LADVAAVS 696 +++ L P+ VLE K+G+P+I+NDGV++A+E+EL DPVEN+GA+LV++ A KTND+AGDGTTT+ VLAQ +I EG+K V AGANP+++ +GIEK V E+K ++K VE SE +A VAA+S Sbjct: 27 VKVTLGPKGRNVVLEKKFGSPQIINDGVSIAREIELADPVENMGAQLVKEVATKTNDVAGDGTTTATVLAQAIIREGLKNVTAGANPMILRKGIEKAVAKAVEEIKAIAKPVETSEAIAQVAAIS 151 The following BLAST results are available for this feature:
BLAST of CN185728 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185728 ID=CN185728; Name=CN185728; organism=Citrus sinensis; type=EST; length=698bpback to top |