CN185728
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185728 vs. ExPASy Swiss-Prot
Match: CH60_METVS (60 kDa chaperonin OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=groL PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.265e-32 Identity = 66/125 (52.80%), Postives = 96/125 (76.80%), Query Frame = 1 Query: 325 LELPLVPRAGMFVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE-DSELADVAAVS 696 +++ L P+ V+E YG+P I NDGVT+AKE+ELEDP EN+GA+L+++ A K ND+AGDGTTT+ VLAQ ++ EG+K++ AG+NPV + RGIEK +K VS L+ SK++ +SE+A VA++S Sbjct: 26 VKVTLGPKGRNVVIEKSYGSPLITNDGVTIAKEIELEDPFENMGAQLIKEVATKANDVAGDGTTTATVLAQAMVKEGLKMITAGSNPVFVKRGIEKATKKAVSILETKSKKIAGNSEIAQVASIS 150
BLAST of CN185728 vs. ExPASy Swiss-Prot
Match: CH60_BACHD (60 kDa chaperonin OS=Bacillus halodurans GN=groL PE=2 SV=2) HSP 1 Score: 139.043 bits (349), Expect = 2.265e-32 Identity = 69/125 (55.20%), Postives = 96/125 (76.80%), Query Frame = 1 Query: 325 LELPLVPRAGMFVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDSE-LADVAAVS 696 +++ L P+ VLE K+G+P I NDGVT+AKE+ELED EN+GAKLV + A+KTND+AGDGTTT+ VLAQ +I EG+K V +GANP++I +GIEK ++ V EL ++SK +E + +A VAA+S Sbjct: 26 VKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDAFENMGAKLVAEVASKTNDIAGDGTTTATVLAQAMIREGLKNVTSGANPMVIRKGIEKATQVAVEELSKISKPIEGKDSIAQVAAIS 150
BLAST of CN185728 vs. ExPASy Swiss-Prot
Match: CH602_TRIEI (60 kDa chaperonin 2 OS=Trichodesmium erythraeum (strain IMS101) GN=groL2 PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.265e-32 Identity = 68/121 (56.20%), Postives = 94/121 (77.69%), Query Frame = 1 Query: 337 LVPRAGMFVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDSE-LADVAAVS 696 L P+ VLE K+GAP+IVNDGVT+AKE+ELED VEN G L+RQAA+KTND AGDGTTT+ VLA ++ EG++ VAAGANP+ + RGI+K + LV ++ + ++++EDS+ +A V A+S Sbjct: 30 LGPKGRNVVLEKKFGAPQIVNDGVTIAKEIELEDHVENTGVSLIRQAASKTNDAAGDGTTTATVLAHAMVKEGLRNVAAGANPIALKRGIDKAAGFLVEKIAEHARQIEDSKAIAQVGAIS 150
BLAST of CN185728 vs. ExPASy Swiss-Prot
Match: CH60_DESHY (60 kDa chaperonin OS=Desulfitobacterium hafniense (strain Y51) GN=groL PE=3 SV=2) HSP 1 Score: 138.658 bits (348), Expect = 2.958e-32 Identity = 69/125 (55.20%), Postives = 96/125 (76.80%), Query Frame = 1 Query: 325 LELPLVPRAGMFVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDSE-LADVAAVS 696 + + L P+ VL+ K+GAP I NDGVT+A+E+ELEDP EN+GA+LV++ A KTND+AGDGTTT+ VLAQ +I EG+K VAAGANP+ I RGIEK +++V ++K +K +E E +A VA++S Sbjct: 26 VRVTLGPKGRNVVLDKKFGAPLITNDGVTIAREIELEDPFENMGAQLVKEVATKTNDVAGDGTTTATVLAQAIIREGLKNVAAGANPMGIKRGIEKAVESVVDDIKTNAKPIESKESIAQVASIS 150
BLAST of CN185728 vs. ExPASy Swiss-Prot
Match: CH60_DESHD (60 kDa chaperonin OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=groL PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.958e-32 Identity = 69/125 (55.20%), Postives = 96/125 (76.80%), Query Frame = 1 Query: 325 LELPLVPRAGMFVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDSE-LADVAAVS 696 + + L P+ VL+ K+GAP I NDGVT+A+E+ELEDP EN+GA+LV++ A KTND+AGDGTTT+ VLAQ +I EG+K VAAGANP+ I RGIEK +++V ++K +K +E E +A VA++S Sbjct: 26 VRVTLGPKGRNVVLDKKFGAPLITNDGVTIAREIELEDPFENMGAQLVKEVATKTNDVAGDGTTTATVLAQAIIREGLKNVAAGANPMGIKRGIEKAVESVVEDIKTNAKPIESKESIAQVASIS 150
BLAST of CN185728 vs. ExPASy Swiss-Prot
Match: CH60_XYLFM (60 kDa chaperonin OS=Xylella fastidiosa (strain M12) GN=groL PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 3.490e-32 Identity = 64/121 (52.89%), Postives = 87/121 (71.90%), Query Frame = 1 Query: 337 LVPRAGMFVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEV-EDSELADVAAVS 696 L P+ VL+ +G+P I DGV+VAKE+EL D EN+GA+++++ A+KTND AGDGTTT+ VLAQ LI EG K VAAG NP+ + RGI+K A V+ELK++SK +D +A VA +S Sbjct: 31 LGPKGRNVVLDKNFGSPIITKDGVSVAKEIELADKFENMGAQMLKEVASKTNDHAGDGTTTATVLAQALIREGCKAVAAGMNPMDLKRGIDKAVIAAVTELKKISKPTSDDKAIAQVATIS 151 HSP 2 Score: 36.5798 bits (83), Expect = 3.490e-32 Identity = 20/39 (51.28%), Postives = 27/39 (69.23%), Query Frame = 3 Query: 243 AAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNV 359 AAK++ F++ A ++ GVN LA+ V TLGPKGRNV Sbjct: 2 AAKEIIFSEK--ARSRMVYGVNLLANAVKATLGPKGRNV 38
BLAST of CN185728 vs. ExPASy Swiss-Prot
Match: CH60_SYNE7 (60 kDa chaperonin OS=Synechococcus elongatus (strain PCC 7942) GN=groL PE=3 SV=2) HSP 1 Score: 138.272 bits (347), Expect = 3.864e-32 Identity = 68/121 (56.20%), Postives = 93/121 (76.86%), Query Frame = 1 Query: 337 LVPRAGMFVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDSE-LADVAAVS 696 L P+ VLE K+GAP+I+NDGVT+AKE+ELED +EN G L+RQAA+KTND AGDGTTT+ VLA ++ EG++ VAAGAN +L+ RGI+K + LV ++K ++ VEDS+ +A V A+S Sbjct: 30 LGPKGRNVVLEKKFGAPQIINDGVTIAKEIELEDHIENTGVALIRQAASKTNDAAGDGTTTATVLAHAVVKEGLRNVAAGANAILLKRGIDKATNFLVEQIKSHARPVEDSKSIAQVGAIS 150
BLAST of CN185728 vs. ExPASy Swiss-Prot
Match: CH60_SYMTH (60 kDa chaperonin OS=Symbiobacterium thermophilum GN=groL PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.864e-32 Identity = 67/125 (53.60%), Postives = 96/125 (76.80%), Query Frame = 1 Query: 325 LELPLVPRAGMFVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDSE-LADVAAVS 696 +++ L PR VL+ K+GAP + NDGVT+A+E+ELEDP EN+GA+LV++ A KTND+AGDGTTTS VLAQ ++ EG+K V GANP+++ RGIEK + V EL++ + VE ++ +A+VAA+S Sbjct: 27 VKVTLGPRGRNVVLDKKFGAPAVANDGVTIAREIELEDPFENMGAQLVKEVATKTNDVAGDGTTTSTVLAQAIVKEGLKNVTGGANPMILKRGIEKAVQVAVEELRKQAIPVETNKAIAEVAAIS 151
BLAST of CN185728 vs. ExPASy Swiss-Prot
Match: CH60_BACWK (60 kDa chaperonin OS=Bacillus weihenstephanensis (strain KBAB4) GN=groL PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.864e-32 Identity = 71/125 (56.80%), Postives = 94/125 (75.20%), Query Frame = 1 Query: 325 LELPLVPRAGMFVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE-DSELADVAAVS 696 +++ L P+ VLE K+G+P I NDGVT+AKE+ELED EN+GAKLV + A+KTND+AGDGTTT+ VLAQ +I EG+K V AGANP+ + +GIEK A + ELK +SK +E S +A VAA+S Sbjct: 26 VKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDAFENMGAKLVAEVASKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPMGLRKGIEKAVTAAIEELKAISKPIEGKSSIAQVAAIS 150
BLAST of CN185728 vs. ExPASy Swiss-Prot
Match: CH60_BACHK (60 kDa chaperonin OS=Bacillus thuringiensis subsp. konkukian GN=groL PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.864e-32 Identity = 72/125 (57.60%), Postives = 94/125 (75.20%), Query Frame = 1 Query: 325 LELPLVPRAGMFVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE-DSELADVAAVS 696 +++ L P+ VLE K+G+P I NDGVT+AKE+ELED EN+GAKLV + A+KTND+AGDGTTT+ VLAQ +I EG+K V AGANP+ + +GIEK A V ELK +SK +E S +A VAA+S Sbjct: 26 VKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDAFENMGAKLVAEVASKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPMGLRKGIEKAVVAAVEELKTISKPIEGKSSIAQVAAIS 150 The following BLAST results are available for this feature:
BLAST of CN185728 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185728 ID=CN185728; Name=CN185728; organism=Citrus sinensis; type=EST; length=698bpback to top |