CN185728
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185728 vs. ExPASy Swiss-Prot
Match: CH60_UNCTG (60 kDa chaperonin OS=Uncultured termite group 1 bacterium phylotype Rs-D17 GN=groL PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.591e-32 Identity = 67/125 (53.60%), Postives = 97/125 (77.60%), Query Frame = 1 Query: 325 LELPLVPRAGMFVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED-SELADVAAVS 696 +++ L P+ VL+ K+GAP I NDGVT+AKE+ELEDP EN+GA+LV++ A+KTND+AGDGTTT+ VLAQ LI EG+K + AGAN I +GIEK A + E+K+++K+V++ E+A +A++S Sbjct: 26 VKITLGPKGRYVVLDKKFGAPTITNDGVTIAKEIELEDPFENMGAQLVKEVASKTNDIAGDGTTTATVLAQSLINEGLKNITAGANANHIKKGIEKAVAAAIDEIKKIAKQVKNKGEIAQIASIS 150
BLAST of CN185728 vs. ExPASy Swiss-Prot
Match: CH601_PROMM (60 kDa chaperonin 1 OS=Prochlorococcus marinus (strain MIT 9313) GN=groL1 PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.591e-32 Identity = 68/118 (57.63%), Postives = 89/118 (75.42%), Query Frame = 1 Query: 343 PRAGMFVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDSELADVAAVS 696 PR VLE K+GAP IVNDGVT+AKE+EL+DP EN+GAKL++Q A+KT D AGDGTTT+ VLAQ ++ EG++ VAAGA+P+ + RG+EK LV EL Q+S+ V + + VA VS Sbjct: 32 PRGRNVVLEKKFGAPDIVNDGVTIAKEIELDDPFENLGAKLIQQVASKTKDKAGDGTTTATVLAQAMVHEGLRNVAAGASPIELRRGMEKAVAQLVEELAQLSQSVGGNAIHQVATVS 149
BLAST of CN185728 vs. ExPASy Swiss-Prot
Match: CH60_THENE (60 kDa chaperonin OS=Thermotoga neapolitana GN=groL PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 8.608e-32 Identity = 67/125 (53.60%), Postives = 97/125 (77.60%), Query Frame = 1 Query: 325 LELPLVPRAGMFVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDSE-LADVAAVS 696 +++ L P+ V+E +G+P I NDGV++AKE+ELED EN+GA+LV++ A+KTND+AGDGTTT+ VLAQ +I EG+K VAAGANP+L+ RGI+K + V E+K++SK++ E +A VAA+S Sbjct: 26 VKITLGPKGRNVVIEKSWGSPTITNDGVSIAKEIELEDKFENLGAQLVKEVASKTNDVAGDGTTTATVLAQAMIKEGLKNVAAGANPILLKRGIDKAVERAVEEIKKLSKKLSGREDIAHVAAIS 150
BLAST of CN185728 vs. ExPASy Swiss-Prot
Match: CH60_PELTS (60 kDa chaperonin OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=groL PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 8.608e-32 Identity = 68/125 (54.40%), Postives = 93/125 (74.40%), Query Frame = 1 Query: 325 LELPLVPRAGMFVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED-SELADVAAVS 696 +++ L P+ VLE K+G+P IVNDGVT+A+E+EL DP EN+GA+LV++ A KTND+AGDGTTT+ VLAQ ++ EG+K VAAGANP++I RGIEK V +K +K +E S +A VA +S Sbjct: 27 VKITLGPKGRNVVLEKKFGSPMIVNDGVTIAREIELSDPFENMGAQLVKEVATKTNDVAGDGTTTACVLAQAIVREGLKNVAAGANPMIIKRGIEKAVDKAVEAIKNSAKTIESKSAIAQVATIS 151
BLAST of CN185728 vs. ExPASy Swiss-Prot
Match: CH60_GUITH (60 kDa chaperonin, chloroplastic OS=Guillardia theta GN=groL PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 8.608e-32 Identity = 66/125 (52.80%), Postives = 97/125 (77.60%), Query Frame = 1 Query: 325 LELPLVPRAGMFVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDSE-LADVAAVS 696 + + L P+ VLE KYGAP+IVNDGVT+AKE+ELED +EN G L+RQAA+KTND+AGDGTTT+ VLA ++ +G+K VAAGAN + + RGIEK ++ +V+++ + ++ VED+ ++ VA++S Sbjct: 26 VSVTLGPKGRNVVLERKYGAPQIVNDGVTIAKEIELEDHIENTGVALIRQAASKTNDVAGDGTTTATVLAHAMVKQGMKNVAAGANAIALKRGIEKATQFIVTQIAEYARPVEDTRAISQVASIS 150
BLAST of CN185728 vs. ExPASy Swiss-Prot
Match: CH60_FERNB (60 kDa chaperonin OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=groL PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 8.608e-32 Identity = 65/125 (52.00%), Postives = 99/125 (79.20%), Query Frame = 1 Query: 325 LELPLVPRAGMFVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDSE-LADVAAVS 696 +++ L P+ V+E +G+P I NDGV++AKE+ELED N+GA+LV++ A+KTND+AGDGTTT+ VLAQ +I EG+K+VAAGANP+LI +GI+K + +V E+K++SK++ +E +A VA++S Sbjct: 26 VKITLGPKGRNVVIEKSWGSPTITNDGVSIAKEIELEDKFANLGAQLVKEVASKTNDVAGDGTTTATVLAQAMIKEGLKMVAAGANPILIKKGIDKATSKVVEEIKKISKKLSSTEDIAHVASIS 150
BLAST of CN185728 vs. ExPASy Swiss-Prot
Match: CH60_BACCN (60 kDa chaperonin OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=groL PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 8.608e-32 Identity = 71/125 (56.80%), Postives = 93/125 (74.40%), Query Frame = 1 Query: 325 LELPLVPRAGMFVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE-DSELADVAAVS 696 +++ L P+ VLE K+G+P I NDGVT+AKE+ELED EN+GAKLV + A+KTND+AGDGTTT+ VLAQ +I EG+K V AGANP+ + +GIEK V ELK +SK +E S +A VAA+S Sbjct: 26 VKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDAFENMGAKLVAEVASKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPMGLRKGIEKAVATAVEELKTISKPIEGKSSIAQVAAIS 150
BLAST of CN185728 vs. ExPASy Swiss-Prot
Match: CH602_PROM3 (60 kDa chaperonin 2 OS=Prochlorococcus marinus (strain MIT 9303) GN=groL2 PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 8.608e-32 Identity = 68/118 (57.63%), Postives = 89/118 (75.42%), Query Frame = 1 Query: 343 PRAGMFVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDSELADVAAVS 696 PR VLE K+GAP IVNDGVT+AKE+EL+DP EN+GAKL++Q A+KT D AGDGTTT+ VLAQ ++ EG++ VAAGA+P+ + RG+EK LV EL Q+S+ V + + VA VS Sbjct: 32 PRGRNVVLEKKFGAPDIVNDGVTIAKEIELDDPFENLGAKLIQQVASKTKDKAGDGTTTATVLAQAMVHEGLRNVAAGASPIELRRGMEKAVAQLVEELAQLSQAVGGNAIHQVATVS 149
BLAST of CN185728 vs. ExPASy Swiss-Prot
Match: CH602_PROAC (60 kDa chaperonin 2 OS=Propionibacterium acnes GN=groL2 PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 8.608e-32 Identity = 68/125 (54.40%), Postives = 95/125 (76.00%), Query Frame = 1 Query: 325 LELPLVPRAGMFVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE-DSELADVAAVS 696 +++ L P+ VL+ K+GAP I NDGVTVAKEV+L DP EN+GA+L ++ A KTND+AGDGTTT+ VLAQ L+ EG++ VA+GANPV + RGIEK A+V EL+ +S+ ++ S++A VA +S Sbjct: 27 VKVTLGPKGRYVVLDKKWGAPTITNDGVTVAKEVDLTDPYENLGAQLAKEVATKTNDVAGDGTTTATVLAQALVHEGLRAVASGANPVGLKRGIEKAVDAVVEELRSISRAIDTTSDMASVATIS 151
BLAST of CN185728 vs. ExPASy Swiss-Prot
Match: CH601_ANAVT (60 kDa chaperonin 1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=groL1 PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 8.608e-32 Identity = 68/121 (56.20%), Postives = 93/121 (76.86%), Query Frame = 1 Query: 337 LVPRAGMFVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDSE-LADVAAVS 696 L P+ VLE K+GAP+IVNDGVT+AKE+ELED +EN G L+RQAA+KTND AGDGTTT+ VLA ++ EG++ VAAGAN +L+ RGI+K + LV +K+ ++ VEDS+ +A V ++S Sbjct: 30 LGPKGRNVVLEKKFGAPQIVNDGVTIAKEIELEDHIENTGVALIRQAASKTNDAAGDGTTTATVLAHAIVKEGLRNVAAGANAILLKRGIDKATGFLVDRIKEHARPVEDSKSIAQVGSIS 150 The following BLAST results are available for this feature:
BLAST of CN185728 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185728 ID=CN185728; Name=CN185728; organism=Citrus sinensis; type=EST; length=698bpback to top |