CN185724
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185724 vs. ExPASy Swiss-Prot
Match: IDHC_SHEEP (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Ovis aries GN=IDH1 PE=2 SV=1) HSP 1 Score: 253.832 bits (647), Expect = 5.886e-67 Identity = 117/191 (61.26%), Postives = 149/191 (78.01%), Query Frame = 2 Query: 101 IV*MDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAQATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKT*LEVYNFTGEGGVALSVYNTDESVRASAEASMNTA 673 +V M GDEMTR+ W+ IK+KLIFP+++LD+ +DL + NRDAT+D+VT ++A+A KYNV +KCATITPDE RV+EF LKQMWKSPNGTIRNIL GTVFRE IICKN+PRL+ GW KPI IGRHA+GDQYRATD V+ GPGK+++ + P KT V+NFT GGVA+ ++N D+S+ A +S A Sbjct: 10 VVEMQGDEMTRIIWELIKEKLIFPYVDLDLHSYDLSIENRDATNDQVTKDAAEAIKKYNVGVKCATITPDEKRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVSGWVKPIIIGRHAYGDQYRATDFVVPGPGKVEICYTPSDGSPKTVYLVHNFTESGGVAMGMFNQDKSIEDFAHSSFQMA 200
BLAST of CN185724 vs. ExPASy Swiss-Prot
Match: IDHC_HUMAN (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Homo sapiens GN=IDH1 PE=1 SV=2) HSP 1 Score: 253.062 bits (645), Expect = 1.004e-66 Identity = 117/191 (61.26%), Postives = 149/191 (78.01%), Query Frame = 2 Query: 101 IV*MDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAQATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKT*LEVYNFTGEGGVALSVYNTDESVRASAEASMNTA 673 +V M GDEMTR+ W+ IK+KLIFP++ELD+ +DLG+ NRDAT+D+VT ++A+A K+NV +KCATITPDE RV+EF LKQMWKSPNGTIRNIL GTVFRE IICKN+PRL+ GW KPI IGRHA+GDQYRATD V+ GPGK+++ + P +K V+NF GGVA+ +YN D+S+ A +S A Sbjct: 10 VVEMQGDEMTRIIWELIKEKLIFPYVELDLHSYDLGIENRDATNDQVTKDAAEAIKKHNVGVKCATITPDEKRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVSGWVKPIIIGRHAYGDQYRATDFVVPGPGKVEITYTPSDGTQKVTYLVHNFEEGGGVAMGMYNQDKSIEDFAHSSFQMA 200
BLAST of CN185724 vs. ExPASy Swiss-Prot
Match: IDHC_MICME (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Microtus mexicanus GN=IDH1 PE=2 SV=1) HSP 1 Score: 252.677 bits (644), Expect = 1.311e-66 Identity = 117/191 (61.26%), Postives = 149/191 (78.01%), Query Frame = 2 Query: 101 IV*MDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAQATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKT*LEVYNFTGEGGVALSVYNTDESVRASAEASMNTA 673 +V M GDEMTR+ W+ IK+KLI P++ELD+ +DLG+ NRDAT+D+VT ++A+A KYNV +KCATITPDE RV+EF LKQMWKSPNGTIRNIL GTVFRE IICKN+PRL+ GW KPI IGRHA+GDQYRATD V+ GPGK+++ F P+ +K V++F GGVA+ +YN D+S+ A +S A Sbjct: 10 VVEMQGDEMTRIIWELIKEKLILPYVELDLHSYDLGIENRDATNDQVTKDAAEAIKKYNVGVKCATITPDEKRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVTGWVKPIIIGRHAYGDQYRATDFVVPGPGKVEITFTPKDGSQKVTYLVHSFEEGGGVAMGMYNQDKSIEDFAHSSFQMA 200
BLAST of CN185724 vs. ExPASy Swiss-Prot
Match: IDHC_RAT (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus GN=Idh1 PE=1 SV=1) HSP 1 Score: 251.521 bits (641), Expect = 2.921e-66 Identity = 116/191 (60.73%), Postives = 149/191 (78.01%), Query Frame = 2 Query: 101 IV*MDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAQATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKT*LEVYNFTGEGGVALSVYNTDESVRASAEASMNTA 673 +V M GDEMTR+ W+ IK+KLI P++ELD+ +DLG+ NRDAT+D+VT ++A+A KYNV +KCATITPDE RV+EF LKQMWKSPNGTIRNIL GTVFRE IICKN+PRL+ GW KPI IGRHA+GDQYRATD V+ GPGK+++ + P+ +K V++F GGVA+ +YN D+S+ A +S A Sbjct: 10 VVEMQGDEMTRIIWELIKEKLILPYVELDLHSYDLGIENRDATNDQVTKDAAEAIKKYNVGVKCATITPDEKRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVTGWVKPIIIGRHAYGDQYRATDFVVPGPGKVEITYTPKDGSQKVTYLVHDFEEGGGVAMGMYNQDKSIEDFAHSSFQMA 200
BLAST of CN185724 vs. ExPASy Swiss-Prot
Match: IDHC_MOUSE (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Mus musculus GN=Idh1 PE=1 SV=1) HSP 1 Score: 251.521 bits (641), Expect = 2.921e-66 Identity = 116/191 (60.73%), Postives = 149/191 (78.01%), Query Frame = 2 Query: 101 IV*MDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAQATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKT*LEVYNFTGEGGVALSVYNTDESVRASAEASMNTA 673 +V M GDEMTR+ W+ IK+KLI P++ELD+ +DLG+ NRDAT+D+VT ++A+A KYNV +KCATITPDE RV+EF LKQMWKSPNGTIRNIL GTVFRE IICKN+PRL+ GW KPI IGRHA+GDQYRATD V+ GPGK+++ + P+ +K V++F GGVA+ +YN D+S+ A +S A Sbjct: 10 VVEMQGDEMTRIIWELIKEKLILPYVELDLHSYDLGIENRDATNDQVTKDAAEAIKKYNVGVKCATITPDEKRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVTGWVKPIIIGRHAYGDQYRATDFVVPGPGKVEITYTPKDGTQKVTYMVHDFEEGGGVAMGMYNQDKSIEDFAHSSFQMA 200
BLAST of CN185724 vs. ExPASy Swiss-Prot
Match: IDHC_MICOH (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Microtus ochrogaster GN=IDH1 PE=3 SV=1) HSP 1 Score: 251.521 bits (641), Expect = 2.921e-66 Identity = 116/191 (60.73%), Postives = 149/191 (78.01%), Query Frame = 2 Query: 101 IV*MDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAQATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKT*LEVYNFTGEGGVALSVYNTDESVRASAEASMNTA 673 +V M GDEMTR+ W+ IK+KLI P++ELD+ +DLG+ NRDAT+D+VT ++A+A KYNV +KCATITPDE RV+EF LKQMWKSPNGTIRNIL GTVFRE IICKN+PRL+ GW KPI IGRHA+GDQYRATD V+ GPGK+++ + P+ +K V++F GGVA+ +YN D+S+ A +S A Sbjct: 10 VVEMQGDEMTRIIWELIKEKLILPYVELDLHSYDLGIENRDATNDQVTKDAAEAIKKYNVGVKCATITPDEKRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVTGWVKPIIIGRHAYGDQYRATDFVVPGPGKVEITYTPKDGSQKVTYLVHSFEEGGGVAMGMYNQDKSIEDFAHSSFQMA 200
BLAST of CN185724 vs. ExPASy Swiss-Prot
Match: IDH_MYCTU (Isocitrate dehydrogenase [NADP] OS=Mycobacterium tuberculosis GN=icd PE=3 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 1.227e-64 Identity = 117/196 (59.69%), Postives = 147/196 (75.00%), Query Frame = 2 Query: 80 KIKVAHPIV*MDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAQATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKT*LEVYNFTGEGGVALSVYNTDESVRASAEASMN 667 KIKV+ P+V +DGDEMTRV WK IKD LI P+L++ + Y+DLG+ +RDATDD+VT+++A A K+ V +KCATITPDEARV+EF LK+MW SPNGTIRNIL GT+FREPI+ NVPRL+PGWTKPI IGRHAFGDQYRAT+ + PG + L F P E+ + +GGV L +YN ES+R A AS + Sbjct: 6 KIKVSGPVVELDGDEMTRVIWKLIKDMLILPYLDIRLDYYDLGIEHRDATDDQVTIDAAYAIKKHGVGVKCATITPDEARVEEFNLKKMWLSPNGTIRNILGGTIFREPIVISNVPRLVPGWTKPIVIGRHAFGDQYRATNFKVDQPGTVTLTFTPADGSAPIVHEMVSIPEDGGVVLGMYNFKESIRDFARASFS 201
BLAST of CN185724 vs. ExPASy Swiss-Prot
Match: IDH_MYCBO (Isocitrate dehydrogenase [NADP] OS=Mycobacterium bovis GN=icd PE=3 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 1.227e-64 Identity = 117/196 (59.69%), Postives = 147/196 (75.00%), Query Frame = 2 Query: 80 KIKVAHPIV*MDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAQATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKT*LEVYNFTGEGGVALSVYNTDESVRASAEASMN 667 KIKV+ P+V +DGDEMTRV WK IKD LI P+L++ + Y+DLG+ +RDATDD+VT+++A A K+ V +KCATITPDEARV+EF LK+MW SPNGTIRNIL GT+FREPI+ NVPRL+PGWTKPI IGRHAFGDQYRAT+ + PG + L F P E+ + +GGV L +YN ES+R A AS + Sbjct: 6 KIKVSGPVVELDGDEMTRVIWKLIKDMLILPYLDIRLDYYDLGIEHRDATDDQVTIDAAYAIKKHGVGVKCATITPDEARVEEFNLKKMWLSPNGTIRNILGGTIFREPIVISNVPRLVPGWTKPIVIGRHAFGDQYRATNFKVDQPGTVTLTFTPADGSAPIVHEMVSIPEDGGVVLGMYNFKESIRDFARASFS 201
BLAST of CN185724 vs. ExPASy Swiss-Prot
Match: IDH_SPHYA (Isocitrate dehydrogenase [NADP] OS=Sphingomonas yanoikuyae GN=icd PE=3 SV=1) HSP 1 Score: 241.506 bits (615), Expect = 3.023e-63 Identity = 114/196 (58.16%), Postives = 150/196 (76.53%), Query Frame = 2 Query: 80 KIKVAHPIV*MDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAQATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKT*LEVYNFTGEGGVALSVYNTDESVRASAEASMN 667 KIKV +P+V +DGDEMTR+ W+ I+++LI P+L++D+KY+DL + RD T D++T+++A A +Y V +KCATITPDEARV+EF LK+MWKSPNGTIRNIL G VFREPI+ KNVPRL+PGWT PI +GRHAFGDQY+ATD + G G L + +V +E EV+ F GVA+ +YN DES+R A+AS N Sbjct: 3 KIKVKNPVVEIDGDEMTRIIWEWIRERLILPYLDVDLKYYDLSVEKRDETSDQITIDAANAIKEYGVGVKCATITPDEARVEEFGLKKMWKSPNGTIRNILGGVVFREPIVIKNVPRLVPGWTDPIVVGRHAFGDQYKATDFKVPGAGTLTMKWVGTNGEELE-YEVFEFP-SAGVAMGMYNLDESIRDFAKASFN 196
BLAST of CN185724 vs. ExPASy Swiss-Prot
Match: IDHC_DICDI (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Dictyostelium discoideum GN=idhC PE=1 SV=1) HSP 1 Score: 239.58 bits (610), Expect = 1.149e-62 Identity = 114/197 (57.87%), Postives = 146/197 (74.11%), Query Frame = 2 Query: 77 QKIKVAHPIV*MDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAQATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKT*LEVYNFTGEGGVALSVYNTDESVRASAEASMN 667 +KI V++P+ + GDE TRV W I+ KLIFPFL+L ++ +DLG+ RD T+D+VT+++A A + V IKCATITPDEARV EF LK+MWKSPNGTIRN L GT+FREPI+CKNVPRL+ W K I IGRHAFGDQYRATD V++G GKL+L + P +V++F +GGVAL +YNTD S++ A A N Sbjct: 3 EKIIVSNPVANLLGDEQTRVIWDLIEKKLIFPFLDLKVETYDLGIEYRDKTNDQVTIDAANAIKRLKVGIKCATITPDEARVTEFGLKEMWKSPNGTIRNTLGGTLFREPIVCKNVPRLVTCWNKSIVIGRHAFGDQYRATDFVVKGAGKLELTYTPADGSAPQKFQVFDFPSDGGVALGMYNTDASIKEFAYACFN 199 The following BLAST results are available for this feature:
BLAST of CN185724 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185724 ID=CN185724; Name=CN185724; organism=Citrus sinensis; type=EST; length=674bpback to top |