CN185706
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM2_MAIZE (Superoxide dismutase [Mn] 3.2, mitochondrial OS=Zea mays GN=SODA.1 PE=2 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 4.010e-85 Identity = 100/129 (77.52%), Postives = 111/129 (86.05%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 708 GH NHSIFW+NL P+ EGG EPPH LGWAID FGS EAL+++M+AEGAALQGSGWVWL LD E K+L VETTANQDPLVTK +LVPLLGIDVWEHAYYLQYKNV+PDYL NIW VMNWKYA +VY+ Sbjct: 101 GHFNHSIFWENLKPISEGG-EPPHGKLGWAIDEDFGSFEALVKRMNAEGAALQGSGWVWLALDKEPKKLSVETTANQDPLVTKGASLVPLLGIDVWEHAYYLQYKNVRPDYLNNIWKVMNWKYAGEVYE 228 HSP 2 Score: 116.701 bits (291), Expect = 4.010e-85 Identity = 60/99 (60.61%), Postives = 70/99 (70.71%), Query Frame = 2 Query: 38 MALRSLATRKAI-----GLGKSVGLGLRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNG 319 MALR+LA++ A+ G + RG+ TV LPDL YD+ ALEP ISGEIM+LHHQKHH YV NYNKA+EQL + K D S VVQLQGAIKFNG Sbjct: 1 MALRTLASKNALSFALGGAARPSAASARGVTTVALPDLSYDFGALEPVISGEIMRLHHQKHHATYVVNYNKALEQLDAVVVKGDASAVVQLQGAIKFNG 99
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_DICDI (Superoxide dismutase [Mn], mitochondrial OS=Dictyostelium discoideum GN=sod2 PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 1.478e-60 Identity = 77/128 (60.16%), Postives = 92/128 (71.88%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 705 GHVNHSIFW NLAP ++ GG P L AI+ +GS+E LI+KMSAE A+QGSGW WLG D RLV++T NQDPL VPLLGIDVWEHAYYL YKNV+ DY+KNIW ++NWK ++ Y Sbjct: 96 GHVNHSIFWTNLAPKNQDGGVAPSGPLADAINKQYGSIEKLIEKMSAETTAIQGSGWGWLGYDKANDRLVIQTQQNQDPLSVSG--YVPLLGIDVWEHAYYLDYKNVRADYVKNIWQIVNWKNVAERY 221 HSP 2 Score: 89.7373 bits (221), Expect = 1.478e-60 Identity = 51/96 (53.12%), Postives = 62/96 (64.58%), Query Frame = 2 Query: 38 MALRSLATRKAIGLGKSVGLGLRGLQT--VTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNG 319 M RSL K +G +S GL G Q+ TLPDLPYDY AL P IS EIM LHH+KHHQ YV N N A+++L A + D + ++ LQ AIKFNG Sbjct: 1 MLPRSLKLIKKVG--ESNGLRNFGSQSNSYTLPDLPYDYGALSPVISPEIMTLHHKKHHQTYVNNLNIALDKLSSASSAKDVAQMIALQSAIKFNG 94
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_MOUSE (Superoxide dismutase [Mn], mitochondrial OS=Mus musculus GN=Sod2 PE=1 SV=3) HSP 1 Score: 147.132 bits (370), Expect = 1.884e-54 Identity = 72/128 (56.25%), Postives = 89/128 (69.53%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 705 GH+NH+IFW NL+P +GGGEP L AI FGS E +K++A +QGSGW WLG + E RL + +NQDPL L+PLLGIDVWEHAYYLQYKNV+PDYLK IWNV+NW+ ++ Y Sbjct: 94 GHINHTIFWTNLSP--KGGGEPKGELLE-AIKRDFGSFEKFKEKLTAVSVGVQGSGWGWLGFNKEQGRLQIAACSNQDPL-QGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVINWENVTERY 217 HSP 2 Score: 87.0409 bits (214), Expect = 1.884e-54 Identity = 41/66 (62.12%), Postives = 48/66 (72.73%), Query Frame = 2 Query: 122 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNG 319 +LPDLPYDY ALEP I+ +IMQLHH KHH AYV N N E+ +AL K D +T V LQ A+KFNG Sbjct: 27 SLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNATEEKYHEALAKGDVTTQVALQPALKFNG 92
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_RAT (Superoxide dismutase [Mn], mitochondrial OS=Rattus norvegicus GN=Sod2 PE=1 SV=2) HSP 1 Score: 148.673 bits (374), Expect = 2.456e-54 Identity = 74/128 (57.81%), Postives = 88/128 (68.75%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 705 GH+NHSIFW NL+P +GGGEP L AI FGS E +K++A +QGSGW WLG + E RL + +NQDPL L+PLLGIDVWEHAYYLQYKNV+PDYLK IWNV+NW+ S Y Sbjct: 94 GHINHSIFWTNLSP--KGGGEPKGELLE-AIKRDFGSFEKFKEKLTAVSVGVQGSGWGWLGFNKEQGRLQIAACSNQDPL-QGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVINWENVSQRY 217 HSP 2 Score: 85.1149 bits (209), Expect = 2.456e-54 Identity = 40/66 (60.61%), Postives = 47/66 (71.21%), Query Frame = 2 Query: 122 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNG 319 +LPDLPYDY ALEP I+ +IMQLHH KHH YV N N E+ +AL K D +T V LQ A+KFNG Sbjct: 27 SLPDLPYDYGALEPHINAQIMQLHHSKHHATYVNNLNVTEEKYHEALAKGDVTTQVALQPALKFNG 92
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_MACFA (Superoxide dismutase [Mn], mitochondrial OS=Macaca fascicularis GN=SOD2 PE=2 SV=3) HSP 1 Score: 145.976 bits (367), Expect = 9.247e-54 Identity = 72/128 (56.25%), Postives = 87/128 (67.97%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 705 GH+NHSIFW NL+P GGGEP L AI FGS E +K++A +QGSGW WLG + E +L + NQDPL L+PLLGIDVWEHAYYLQYKNV+PDYLK IWNV+NW+ ++ Y Sbjct: 94 GHINHSIFWTNLSP--NGGGEPKGELLE-AIKRDFGSFEKFKEKLTAASVGVQGSGWGWLGFNKERGQLQIAACPNQDPL-QGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVINWENVTERY 217 HSP 2 Score: 85.8853 bits (211), Expect = 9.247e-54 Identity = 45/92 (48.91%), Postives = 57/92 (61.96%), Query Frame = 2 Query: 53 LATRKAIGLGKSVGLGLRGL---QTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNG 319 + +R G G+ + L L Q +LPDLPYDY ALEP I+ +IMQLHH KHH AYV N N E+ +AL K D + + LQ A+KFNG Sbjct: 1 MLSRAVCGTGRQLAPALGYLGSRQKHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQIALQPALKFNG 92
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_MACNE (Superoxide dismutase [Mn], mitochondrial OS=Macaca nemestrina GN=SOD2 PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 1.205e-53 Identity = 72/128 (56.25%), Postives = 87/128 (67.97%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 705 GH+NHSIFW NL+P GGGEP L AI FGS E +K++A +QGSGW WLG + E +L + NQDPL L+PLLGIDVWEHAYYLQYKNV+PDYLK IWNV+NW+ ++ Y Sbjct: 94 GHINHSIFWTNLSP--NGGGEPKGELLE-AIKRDFGSFEKYKEKLTAASVGVQGSGWGWLGFNKERGQLQIAACLNQDPL-QGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVINWENVTERY 217 HSP 2 Score: 85.8853 bits (211), Expect = 1.205e-53 Identity = 45/92 (48.91%), Postives = 57/92 (61.96%), Query Frame = 2 Query: 53 LATRKAIGLGKSVGLGLRGL---QTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNG 319 + +R G G+ + L L Q +LPDLPYDY ALEP I+ +IMQLHH KHH AYV N N E+ +AL K D + + LQ A+KFNG Sbjct: 1 MLSRAVCGTGRQLAPALGYLGSRQKHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQIALQPALKFNG 92
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_BOVIN (Superoxide dismutase [Mn], mitochondrial OS=Bos taurus GN=SOD2 PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 2.670e-53 Identity = 72/128 (56.25%), Postives = 86/128 (67.19%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 705 GH+NHSIFW NL+P GGGEP L AI FGS +K++A +QGSGW WLG + E RL + +NQDPL L+PLLGIDVWEHAYYLQYKNV+PDYLK IWNV+NW+ + Y Sbjct: 94 GHINHSIFWTNLSP--NGGGEPQGELLE-AIKRDFGSFAKFKEKLTAVSVGVQGSGWGWLGFNKEQGRLQIAACSNQDPL-QGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVINWENVTARY 217 HSP 2 Score: 86.2705 bits (212), Expect = 2.670e-53 Identity = 41/69 (59.42%), Postives = 49/69 (71.01%), Query Frame = 2 Query: 113 QTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNG 319 Q +LPDLPYDY ALEP I+ +IMQLHH KHH AYV N N A E+ +AL K D + + LQ A+KFNG Sbjct: 24 QKHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVAEEKYREALEKGDVTAQIALQPALKFNG 92
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_MACMU (Superoxide dismutase [Mn], mitochondrial OS=Macaca mulatta GN=SOD2 PE=2 SV=2) HSP 1 Score: 145.976 bits (367), Expect = 4.546e-53 Identity = 72/128 (56.25%), Postives = 87/128 (67.97%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 705 GH+NHSIFW NL+P GGGEP L AI FGS E +K++A +QGSGW WLG + E +L + NQDPL L+PLLGIDVWEHAYYLQYKNV+PDYLK IWNV+NW+ ++ Y Sbjct: 70 GHINHSIFWTNLSP--NGGGEPKGELLE-AIKRDFGSFEKFKEKLTAASVGVQGSGWGWLGFNKERGQLQIAACPNQDPL-QGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVINWENVTERY 193 HSP 2 Score: 83.5741 bits (205), Expect = 4.546e-53 Identity = 39/66 (59.09%), Postives = 47/66 (71.21%), Query Frame = 2 Query: 122 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNG 319 +LPDLPYDY ALEP I+ +IMQLHH KHH AYV N N E+ +AL K D + + LQ A+KFNG Sbjct: 3 SLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQIALQPALKFNG 68
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_MACFU (Superoxide dismutase [Mn], mitochondrial OS=Macaca fuscata fuscata GN=SOD2 PE=2 SV=2) HSP 1 Score: 145.976 bits (367), Expect = 4.546e-53 Identity = 72/128 (56.25%), Postives = 87/128 (67.97%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 705 GH+NHSIFW NL+P GGGEP L AI FGS E +K++A +QGSGW WLG + E +L + NQDPL L+PLLGIDVWEHAYYLQYKNV+PDYLK IWNV+NW+ ++ Y Sbjct: 70 GHINHSIFWTNLSP--NGGGEPKGELLE-AIKRDFGSFEKFKEKLTAASVGVQGSGWGWLGFNKERGQLQIAACPNQDPL-QGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVINWENVTERY 193 HSP 2 Score: 83.5741 bits (205), Expect = 4.546e-53 Identity = 39/66 (59.09%), Postives = 47/66 (71.21%), Query Frame = 2 Query: 122 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNG 319 +LPDLPYDY ALEP I+ +IMQLHH KHH AYV N N E+ +AL K D + + LQ A+KFNG Sbjct: 3 SLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQIALQPALKFNG 68
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_PONPY (Superoxide dismutase [Mn], mitochondrial OS=Pongo pygmaeus GN=SOD2 PE=2 SV=3) HSP 1 Score: 144.436 bits (363), Expect = 1.005e-52 Identity = 71/128 (55.47%), Postives = 86/128 (67.19%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 705 GH+NHSIFW NL+P GGGEP L AI FGS + +K++A +QGSGW WLG + E L + NQDPL L+PLLGIDVWEHAYYLQYKNV+PDYLK IWNV+NW+ ++ Y Sbjct: 94 GHINHSIFWTNLSP--NGGGEPKGELLE-AIKRDFGSFDKFKEKLTAASVGVQGSGWGWLGFNKERGHLQIAACPNQDPL-QGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVINWENVTERY 217 HSP 2 Score: 83.9593 bits (206), Expect = 1.005e-52 Identity = 40/69 (57.97%), Postives = 48/69 (69.57%), Query Frame = 2 Query: 113 QTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNG 319 Q +LPDLPYDY ALEP I+ +IMQLHH KHH AYV N N E+ +AL K D + + LQ A+KFNG Sbjct: 24 QKHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQIALQPALKFNG 92 The following BLAST results are available for this feature:
BLAST of CN185706 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 221
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185706 ID=CN185706; Name=CN185706; organism=Citrus sinensis; type=EST; length=712bpback to top |