CN185706
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM1_STAA3 (Superoxide dismutase [Mn/Fe] 1 OS=Staphylococcus aureus (strain USA300) GN=sodA PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 2.712e-33 Identity = 55/128 (42.97%), Postives = 80/128 (62.50%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 705 GH+NHS+FW+ L+P E G I +GSLE ++ + + AA GSGW WL ++ +L + TT NQD +T+ T P+LG+DVWEHAYYL+Y+N +PDY+ WNV+NW+ ++Y Sbjct: 77 GHLNHSLFWELLSPNSEEKGTVVEK-----IKEQWGSLEEFKKEFADKAAARFGSGWAWLVVNNG--QLEIVTTPNQDNPLTEGKT--PILGLDVWEHAYYLKYQNKRPDYIGAFWNVVNWEKVDELY 195 HSP 2 Score: 53.1434 bits (126), Expect = 2.712e-33 Identity = 27/71 (38.03%), Postives = 36/71 (50.70%), Query Frame = 2 Query: 125 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVD------TSTVVQLQGAIKFNG 319 LP LPY + ALEP E M++HH +HH YVT N AVE ++ S +Q A++ NG Sbjct: 5 LPKLPYAFDALEPHFDKETMEIHHDRHHNTYVTKLNAAVEGTDLESKSIEEIVANLDSVPANIQTAVRNNG 75
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODF_PYRAE (Superoxide dismutase [Fe] OS=Pyrobaculum aerophilum GN=sod PE=1 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 3.527e-33 Identity = 55/154 (35.71%), Postives = 77/154 (50.00%), Query Frame = 1 Query: 235 GGRAAFSSFEQSR----HFHRRPVAGRYQVQRRGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNW 684 G AA E+ R R V GH+ HSIFW N+AP +GGG+P + I+ FGS E ++ S ++G GW L + ++L++ + + A LL +DVWEHAYYLQYKN + Y+ N WNV+NW Sbjct: 42 GANAALEKLEKFRKGEAQIDIRAVLRDLSFHLNGHILHSIFWPNMAPPGKGGGKPG-GKIADLINKFFGSFEKFKEEFSQAAKNVEGVGWAILVYEPLEEQLLILQIEKHN--LMHAADAQVLLALDVWEHAYYLQYKNDRGSYVDNWWNVVNW 192 HSP 2 Score: 67.781 bits (164), Expect = 3.527e-33 Identity = 31/43 (72.09%), Postives = 34/43 (79.07%), Query Frame = 2 Query: 122 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQL 250 TLP LPY Y+ALEP IS EIMQLHHQKHHQ YV N A+E+L Sbjct: 8 TLPPLPYAYNALEPYISAEIMQLHHQKHHQGYVNGANAALEKL 50
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_STAHJ (Superoxide dismutase [Mn/Fe] OS=Staphylococcus haemolyticus (strain JCSC1435) GN=sodA PE=3 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 4.600e-33 Identity = 54/128 (42.19%), Postives = 79/128 (61.72%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 705 GH+NHS+FW+ L P E G I +GSL+ ++ + + AA GSGW WL ++ +L + TT NQD +T+ T P+LG+DVWEHAYYL+Y+N +PDY+ WNV+NW+ ++Y Sbjct: 77 GHLNHSLFWELLTPNSEEKGTVVDK-----IKEQWGSLDEFKKEFADKAAARFGSGWAWLVVNNG--QLEIVTTPNQDNPLTEGKT--PILGLDVWEHAYYLKYQNKRPDYISAFWNVVNWEKVDELY 195 HSP 2 Score: 53.5286 bits (127), Expect = 4.600e-33 Identity = 23/40 (57.50%), Postives = 27/40 (67.50%), Query Frame = 2 Query: 125 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE 244 LP+LPY ALEP I + M++HH KHH YVT N AVE Sbjct: 5 LPNLPYATDALEPHIDKQTMEIHHDKHHNTYVTKLNSAVE 44
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_BRAFL (Superoxide dismutase [Mn], mitochondrial (Fragment) OS=Branchiostoma floridae PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 4.649e-33 Identity = 53/95 (55.79%), Postives = 59/95 (62.11%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDV 606 GH+NHSIFW NL P GGGEP L AI FGS EA +KM+A A+QGSGW WLGLD K+L + NQDPL L PLLGIDV Sbjct: 54 GHINHSIFWNNLCP--SGGGEPT-GPLAEAITRDFGSFEAFKEKMTAATVAVQGSGWGWLGLDPTSKKLRIVACPNQDPL-EGTTGLKPLLGIDV 144 HSP 2 Score: 68.1662 bits (165), Expect = 4.649e-33 Identity = 31/51 (60.78%), Postives = 38/51 (74.51%), Query Frame = 2 Query: 167 ISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNG 319 IS EIMQ+HHQKHH YV N N A EQL +A++K D + ++ LQ AIKFNG Sbjct: 2 ISAEIMQVHHQKHHATYVNNLNAAEEQLAEAIHKQDVTKMIALQSAIKFNG 52
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_PSEAE (Superoxide dismutase [Mn] OS=Pseudomonas aeruginosa GN=sodA PE=3 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 5.986e-33 Identity = 54/128 (42.19%), Postives = 76/128 (59.38%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 705 GH NHS+FW ++P +GGG P LG AID G EA + GSGW WL + T L+VE++ NQD + T P+LG+DVWEHAYYL+Y+N +P+Y+ +NV++W+ + Y Sbjct: 77 GHANHSLFWTVMSP--QGGGRPD-GDLGRAIDEQLGGFEAFKDAFTKAALTRFGSGWAWLSV-TPQGSLLVESSGNQDSPLMNGNT--PILGLDVWEHAYYLKYQNRRPEYIGAFYNVIDWREVARRY 198 HSP 2 Score: 56.225 bits (134), Expect = 5.986e-33 Identity = 30/59 (50.85%), Postives = 35/59 (59.32%), Query Frame = 2 Query: 125 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQG 301 LP LPY Y ALEP I M++HH KHHQ YV N N A+E A V+ S + QL G Sbjct: 5 LPPLPYAYDALEPHIDALTMEIHHSKHHQTYVNNLNAALEGTPYAEQPVE-SLLRQLAG 62
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_STRAG (Superoxide dismutase [Mn/Fe] OS=Streptococcus agalactiae GN=sodA PE=3 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 5.988e-33 Identity = 51/129 (39.53%), Postives = 77/129 (59.69%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 708 GH+NH++FW+ ++P + L I+ FGS E +A GSGW WL ++ E K L V +TANQD + + P+LG+DVWEHAYYL Y+NV+P+Y+K + ++NW +++YQ Sbjct: 77 GHLNHALFWELMSPEETQISQ----ELSEDINATFGSFEDFKAAFTAAATGRFGSGWAWLVVNAEGK-LEVLSTANQDTPIMEGKK--PILGLDVWEHAYYLNYRNVRPNYIKAFFEIINWNKVNELYQ 198 HSP 2 Score: 59.6918 bits (143), Expect = 5.988e-33 Identity = 26/43 (60.47%), Postives = 29/43 (67.44%), Query Frame = 2 Query: 119 VTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQ 247 + LPDLPY Y ALEP I E M LHH KHH YV N N A+E+ Sbjct: 3 IILPDLPYAYDALEPHIDAETMTLHHDKHHATYVANANAALEK 45
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_STRA5 (Superoxide dismutase [Mn/Fe] OS=Streptococcus agalactiae serotype V GN=sodA PE=3 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 5.988e-33 Identity = 51/129 (39.53%), Postives = 77/129 (59.69%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 708 GH+NH++FW+ ++P + L I+ FGS E +A GSGW WL ++ E K L V +TANQD + + P+LG+DVWEHAYYL Y+NV+P+Y+K + ++NW +++YQ Sbjct: 77 GHLNHALFWELMSPEETQISQ----ELSEDINATFGSFEDFKAAFTAAATGRFGSGWAWLVVNAEGK-LEVLSTANQDTPIMEGKK--PILGLDVWEHAYYLNYRNVRPNYIKAFFEIINWNKVNELYQ 198 HSP 2 Score: 59.6918 bits (143), Expect = 5.988e-33 Identity = 26/43 (60.47%), Postives = 29/43 (67.44%), Query Frame = 2 Query: 119 VTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQ 247 + LPDLPY Y ALEP I E M LHH KHH YV N N A+E+ Sbjct: 3 IILPDLPYAYDALEPHIDAETMTLHHDKHHATYVANANAALEK 45
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_STRA3 (Superoxide dismutase [Mn/Fe] OS=Streptococcus agalactiae serotype III GN=sodA PE=3 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 5.988e-33 Identity = 51/129 (39.53%), Postives = 77/129 (59.69%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 708 GH+NH++FW+ ++P + L I+ FGS E +A GSGW WL ++ E K L V +TANQD + + P+LG+DVWEHAYYL Y+NV+P+Y+K + ++NW +++YQ Sbjct: 77 GHLNHALFWELMSPEETQISQ----ELSEDINATFGSFEDFKAAFTAAATGRFGSGWAWLVVNAEGK-LEVLSTANQDTPIMEGKK--PILGLDVWEHAYYLNYRNVRPNYIKAFFEIINWNKVNELYQ 198 HSP 2 Score: 59.6918 bits (143), Expect = 5.988e-33 Identity = 26/43 (60.47%), Postives = 29/43 (67.44%), Query Frame = 2 Query: 119 VTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQ 247 + LPDLPY Y ALEP I E M LHH KHH YV N N A+E+ Sbjct: 3 IILPDLPYAYDALEPHIDAETMTLHHDKHHATYVANANAALEK 45
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_ONCVO (Superoxide dismutase [Mn], mitochondrial OS=Onchocerca volvulus GN=sod-2 PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.136e-33 Identity = 68/130 (52.31%), Postives = 86/130 (66.15%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 711 GH+NH++FW+ L V G P+S L AI FGSLE +I K++A+ A+QGSGW WL D E KRL + NQD L+ L+PL IDVWEHAYYLQYKN++PD++K IW + NWK SD Y K Sbjct: 94 GHINHTLFWEGLTAVKNSG--EPNSELMTAIKKDFGSLETMIDKLNAKTIAIQGSGWGWLAYDKEMKRLQLACCPNQD-LLEPTTGLIPLFCIDVWEHAYYLQYKNLRPDFVKAIWKIANWKIISDRYIK 220 HSP 2 Score: 77.0258 bits (188), Expect = 1.088e-13 Identity = 44/93 (47.31%), Postives = 57/93 (61.29%), Query Frame = 2 Query: 77 LGKSVGLGLRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFN--GEVMSTTQFSG 349 +GK+ L + L+ V LPDLPYDY ALEP +S EIMQ+HH KHH AYV N+A E++ +AL K DT V + FN G + T + G Sbjct: 13 VGKNYCLNTQRLKHV-LPDLPYDYGALEPILSAEIMQVHHGKHHAAYVNALNQAEEKVKEALAKGDTQAAVAGTKLMNFNTGGHINHTLFWEG 104
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_HAEDU (Superoxide dismutase [Mn] OS=Haemophilus ducreyi GN=sodA PE=3 SV=4) HSP 1 Score: 105.531 bits (262), Expect = 7.789e-33 Identity = 60/134 (44.78%), Postives = 78/134 (58.21%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQD-PLVTKAPTLV---PLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 711 GHVNH++FWK L G +L AI FGS+EA + A GSGW WL L E +L V +TANQD P++ K V P+ +DVWEHAYYL Y+N +PDY+K WNV+NW AS +++ Sbjct: 78 GHVNHTLFWKGLKT-----GTTLQGALKDAIIRDFGSVEAFQAEFEQAAATRFGSGWAWLVL--EEGKLAVVSTANQDSPIMGKDVAGVSGYPIFTLDVWEHAYYLHYQNRRPDYIKAFWNVVNWDEASRRFEE 204 HSP 2 Score: 56.225 bits (134), Expect = 7.789e-33 Identity = 26/51 (50.98%), Postives = 32/51 (62.75%), Query Frame = 2 Query: 116 TVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNK 268 T LP+L Y Y ALEP E M++HH KHHQAYV N N +E+ + L K Sbjct: 2 TYQLPELGYAYDALEPYFDKETMEIHHSKHHQAYVNNSNALLEKHPELLEK 52 The following BLAST results are available for this feature:
BLAST of CN185706 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 221
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185706 ID=CN185706; Name=CN185706; organism=Citrus sinensis; type=EST; length=712bpback to top |