CN185706
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM3_PLEBO (Superoxide dismutase [Mn] 3 (Fragment) OS=Plectonema boryanum GN=sodA3 PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.012e-32 Identity = 54/129 (41.86%), Postives = 84/129 (65.12%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 708 GH+NH+IFW+ ++P +GGG+P ++ AI+ FG+ E+ ++ + G GSGWVWL + + +L + +TANQD + + P++G DVWEHAYYL+Y+N + DYL N WNV+NW + +Q Sbjct: 108 GHLNHTIFWQIMSP--DGGGQPT-GAIAQAINQTFGNFESFRKQFNEAGGDRFGSGWVWLVRNAQ-GQLQIVSTANQDNPIMEGN--YPIMGNDVWEHAYYLRYQNRRADYLNNWWNVVNWNEINRRFQ 230 HSP 2 Score: 52.373 bits (124), Expect = 1.012e-32 Identity = 22/40 (55.00%), Postives = 27/40 (67.50%), Query Frame = 2 Query: 125 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE 244 LP LPYD AL AI E M++HH +HHQ YV N N A++ Sbjct: 35 LPPLPYDAGALSKAIDAETMRIHHDRHHQTYVDNLNTALK 74
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_STRMU (Superoxide dismutase [Mn/Fe] OS=Streptococcus mutans GN=sodA PE=1 SV=3) HSP 1 Score: 101.679 bits (252), Expect = 1.015e-32 Identity = 52/128 (40.62%), Postives = 77/128 (60.16%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 705 GH+NH++FW+ L+P + + AI+ FGS + +A GSGW WL +D E K L V +TANQD +++ L P+L +DVWEHAYYL Y+NV+P+Y+K + V+NW + +Y Sbjct: 77 GHLNHALFWELLSPEKT----KVTAEVAAAINEAFGSFDDFKAAFTAAATTRFGSGWAWLVVDKEGK-LEVTSTANQDTPISQG--LKPILALDVWEHAYYLNYRNVRPNYIKAFFEVINWNTVARLY 197 HSP 2 Score: 59.6918 bits (143), Expect = 1.015e-32 Identity = 26/43 (60.47%), Postives = 29/43 (67.44%), Query Frame = 2 Query: 119 VTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQ 247 + LPDLPY Y ALEP I E M LHH KHH YV N N A+E+ Sbjct: 3 ILLPDLPYAYDALEPYIDAETMTLHHDKHHATYVANANAALEK 45
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_ACIAD (Superoxide dismutase [Mn] OS=Acinetobacter sp. (strain ADP1) GN=sodA PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.319e-32 Identity = 58/132 (43.94%), Postives = 82/132 (62.12%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQD-PLVTKAPTL-VPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 711 GH NH+ FW++LA ++ G P +L I FGSL+A QK + + GSGW WL + T +L V +T NQD PL+ + T PLLG+DVWEHAYYL+Y+N + DY+K W+V+NW ++ Y + Sbjct: 96 GHFNHTFFWESLAATNKTG--QPSPALVKQITQDFGSLDAFKQKFNEAASGRFGSGWAWL-IVTPNGKLAVTSTPNQDNPLMDLSETKGTPLLGLDVWEHAYYLKYQNRRADYIKAFWSVVNWNKVNERYNE 224 HSP 2 Score: 50.447 bits (119), Expect = 1.319e-32 Identity = 36/94 (38.30%), Postives = 53/94 (56.38%), Query Frame = 2 Query: 47 RSLATRKAIGLGKSVGLGLRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAI-KFNGEV 325 RSL T + L SV + + L LPY +AL+PAI + M++H+ KHH+AYV N N + + + L+K D ++QLQ I K+N V Sbjct: 3 RSLKTTLIL-LASSV-ISMSALAEFKQAPLPYATNALQPAIDQQTMEIHYGKHHKAYVDNLNAQI-KTYPELDKTD---LIQLQKQISKYNTAV 90
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODF_STRCO (Superoxide dismutase [Fe-Zn] 1 OS=Streptomyces coelicolor GN=sodF1 PE=1 SV=3) HSP 1 Score: 90.8929 bits (224), Expect = 1.321e-32 Identity = 51/133 (38.35%), Postives = 71/133 (53.38%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSS----LGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 708 GH+ HSI+W N+ +GGGEP L AI FGS +++ A QGSGW L + RL+VE + V + T P+L D WEHA+YLQYKN K D++ +W V+NW+ + Y+ Sbjct: 72 GHILHSIYWHNMTG--DGGGEPLDKDGVGELADAIAESFGSFAGFRAQLTKAAATTQGSGWGVLAYEPLSGRLIVEQIYDHQGNVGQGST--PILVFDAWEHAFYLQYKNQKVDFIDAMWAVVNWQDVARRYE 200 HSP 2 Score: 70.0922 bits (170), Expect = 1.321e-32 Identity = 33/69 (47.83%), Postives = 45/69 (65.22%), Query Frame = 2 Query: 110 LQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFN 316 + TLP+LPYDYSAL P IS EI++LHH KHH AYV N +EQL +A +K ++ L+ + F+ Sbjct: 1 MSVYTLPELPYDYSALAPVISPEIIELHHDKHHAAYVKGANDTLEQLAEARDKETWGSINGLEKNLAFH 69
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_EPTST (Superoxide dismutase [Mn], mitochondrial (Fragment) OS=Eptatretus stoutii PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.269e-32 Identity = 51/95 (53.68%), Postives = 63/95 (66.32%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDV 606 GH+NHSIFW+NL+P GGG+P L AI+ FGS++ L +K+ A +QGSGW WLG + E KRL + T ANQDPL L PLLGIDV Sbjct: 54 GHINHSIFWRNLSP--SGGGQPCGDLLK-AIENDFGSVDKLREKLVAAAVGVQGSGWAWLGFNKESKRLQIATCANQDPL-QGTTGLFPLLGIDV 144 HSP 2 Score: 63.929 bits (154), Expect = 2.269e-32 Identity = 31/51 (60.78%), Postives = 35/51 (68.63%), Query Frame = 2 Query: 167 ISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNG 319 IS EIMQLHH KHH AYV N N E+L +AL K D +T V LQ A +FNG Sbjct: 2 ISAEIMQLHHSKHHAAYVNNVNVVEEKLAEALGKGDVNTQVSLQPAFRFNG 52
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM2_PLEBO (Superoxide dismutase [Mn] 2 OS=Plectonema boryanum GN=sodA2 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 2.920e-32 Identity = 56/140 (40.00%), Postives = 82/140 (58.57%), Query Frame = 1 Query: 274 HFHRRPVAGRYQVQRR--GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWK 687 H R P R V+ GHVNH++FW+ + G P ++ AI+ FGS +A Q+ + G GSGWVWL + ++ L + +T NQD + + T P++G DVWEHAYYL+Y+N +P+YL WNV+NW+ Sbjct: 60 HLDRVPEDVRTTVRNNAGGHVNHTMFWEIMGA---NGSGAPTGAISEAINNSFGSFDAFKQQFNDAGTKRFGSGWVWL-VRSQQGDLQILSTPNQDSPLIEGHT--PIMGNDVWEHAYYLKYQNRRPEYLNAWWNVLNWE 193 HSP 2 Score: 55.8398 bits (133), Expect = 2.920e-32 Identity = 25/41 (60.98%), Postives = 27/41 (65.85%), Query Frame = 2 Query: 125 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQ 247 L LPY Y ALEP I MQLHH KHH AYV N N A+E+ Sbjct: 5 LKPLPYAYDALEPYIDATTMQLHHDKHHAAYVNNLNAAIEK 45
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_BACHD (Superoxide dismutase [Mn] OS=Bacillus halodurans GN=sodA PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 2.922e-32 Identity = 54/130 (41.54%), Postives = 77/130 (59.23%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 711 GH NH++FW+ L+P GG P L AI+ FGS + +K + A GSGW WL ++ +L + +T NQD + + T P+LG+DVWEHAYYL Y+N +PDY+ WNV+NW + Y + Sbjct: 78 GHANHTLFWQILSP---NGGGAPTGELADAINAEFGSFDQFKEKFADAAANRFGSGWAWLVVNDG--KLEITSTPNQDTPLMEGKT--PILGLDVWEHAYYLNYQNRRPDYISAFWNVVNWDEVAKRYNE 200 HSP 2 Score: 49.2914 bits (116), Expect = 2.922e-32 Identity = 22/40 (55.00%), Postives = 25/40 (62.50%), Query Frame = 2 Query: 125 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE 244 LP LPY +ALEP I M +HH KHH YVT N A+E Sbjct: 5 LPKLPYPANALEPHIDEATMNIHHGKHHNTYVTKLNAALE 44
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM2_STAAB (Superoxide dismutase [Mn/Fe] 2 OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=sodM PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 6.457e-32 Identity = 56/142 (39.44%), Postives = 81/142 (57.04%), Query Frame = 1 Query: 289 PVAGRYQVQRRG--HVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 708 P A R V+ G H NHS+FW+ L+P E G I +G+L+ + + + L GSGW WL ++ +L + TT NQD +T+ T P+L DVWEHAYYL+Y+N +PDY+ WN++NWK ++YQ Sbjct: 64 PEAMRMSVRNNGGGHFNHSLFWEILSPNSEEKGGVIDD-----IKAQWGTLDEFKNEFANKATTLFGSGWTWLVVNNG--KLEIVTTPNQDNPLTEGKT--PILLFDVWEHAYYLKYQNKRPDYMTAFWNIVNWKKVDELYQ 196 HSP 2 Score: 53.5286 bits (127), Expect = 6.457e-32 Identity = 23/40 (57.50%), Postives = 25/40 (62.50%), Query Frame = 2 Query: 125 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE 244 LP+LPY Y ALEP I M+ HH KHH YVT N VE Sbjct: 5 LPNLPYAYDALEPYIDQRTMEFHHDKHHNTYVTKLNATVE 44
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM2_STAAW (Superoxide dismutase [Mn/Fe] 2 OS=Staphylococcus aureus (strain MW2) GN=sodM PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 8.409e-32 Identity = 56/142 (39.44%), Postives = 81/142 (57.04%), Query Frame = 1 Query: 289 PVAGRYQVQRRG--HVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 708 P A R V+ G H NHS+FW+ L+P E G I +G+L+ + + + L GSGW WL ++ +L + TT NQD +T+ T P+L DVWEHAYYL+Y+N +PDY+ WN++NWK ++YQ Sbjct: 64 PEAMRMSVRNNGGGHFNHSLFWEILSPNSEEKGGVIDD-----IKAQWGTLDEFKNEFANKATTLFGSGWTWLVVNDG--KLEIVTTPNQDNPLTEGKT--PILLFDVWEHAYYLKYQNKRPDYMTAFWNIVNWKKVDELYQ 196 HSP 2 Score: 53.5286 bits (127), Expect = 8.409e-32 Identity = 23/40 (57.50%), Postives = 25/40 (62.50%), Query Frame = 2 Query: 125 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE 244 LP+LPY Y ALEP I M+ HH KHH YVT N VE Sbjct: 5 LPNLPYAYDALEPYIDQRTMEFHHDKHHNTYVTKLNATVE 44
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM2_STAAS (Superoxide dismutase [Mn/Fe] 2 OS=Staphylococcus aureus (strain MSSA476) GN=sodM PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 8.409e-32 Identity = 56/142 (39.44%), Postives = 81/142 (57.04%), Query Frame = 1 Query: 289 PVAGRYQVQRRG--HVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 708 P A R V+ G H NHS+FW+ L+P E G I +G+L+ + + + L GSGW WL ++ +L + TT NQD +T+ T P+L DVWEHAYYL+Y+N +PDY+ WN++NWK ++YQ Sbjct: 64 PEAMRMSVRNNGGGHFNHSLFWEILSPNSEEKGGVIDD-----IKAQWGTLDEFKNEFANKATTLFGSGWTWLVVNDG--KLEIVTTPNQDNPLTEGKT--PILLFDVWEHAYYLKYQNKRPDYMTAFWNIVNWKKVDELYQ 196 HSP 2 Score: 53.5286 bits (127), Expect = 8.409e-32 Identity = 23/40 (57.50%), Postives = 25/40 (62.50%), Query Frame = 2 Query: 125 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE 244 LP+LPY Y ALEP I M+ HH KHH YVT N VE Sbjct: 5 LPNLPYAYDALEPYIDQRTMEFHHDKHHNTYVTKLNATVE 44 The following BLAST results are available for this feature:
BLAST of CN185706 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 221
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185706 ID=CN185706; Name=CN185706; organism=Citrus sinensis; type=EST; length=712bpback to top |