CN185706
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_MYCSC (Superoxide dismutase [Mn] (Fragment) OS=Mycobacterium scrofulaceum GN=sodA PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.545e-30 Identity = 62/121 (51.24%), Postives = 76/121 (62.81%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNW 684 GHVNHSI+WKNL+P GG+ P L AID FGS + + SA LQGSGW LG DT RL+ +Q V ++PLL +D+WEHA+YLQYKNVK DY+K WNV+NW Sbjct: 46 GHVNHSIWWKNLSP---DGGDKPTGELAAAIDDAFGSFDKFRAQFSAAANGLQGSGWAVLGYDTLGSRLLTFQLYDQQANVPLG--IIPLLQVDMWEHAFYLQYKNVKADYVKAFWNVVNW 161 HSP 2 Score: 31.5722 bits (70), Expect = 1.545e-30 Identity = 14/33 (42.42%), Postives = 18/33 (54.55%), Query Frame = 2 Query: 188 LHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTV 286 LHH KHH YV N AV +L +A D + + Sbjct: 1 LHHSKHHATYVKGVNDAVAKLQEARANDDHAAI 33
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_MYCIT (Superoxide dismutase [Mn] (Fragment) OS=Mycobacterium intracellulare GN=sodA PE=3 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 2.012e-30 Identity = 62/121 (51.24%), Postives = 76/121 (62.81%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNW 684 GHVNHSI+WKNL+P GG+ P L AID FGS + + SA LQGSGW LG DT RL+ +Q V ++PLL +D+WEHA+YLQYKNVK DY+K WNV+NW Sbjct: 46 GHVNHSIWWKNLSP---DGGDKPTGELAAAIDDAFGSFDRFRAQFSAAANGLQGSGWAVLGYDTLGNRLLTFQLYDQQANVPLG--IIPLLQVDMWEHAFYLQYKNVKADYVKAFWNVVNW 161 HSP 2 Score: 31.187 bits (69), Expect = 2.012e-30 Identity = 13/33 (39.39%), Postives = 18/33 (54.55%), Query Frame = 2 Query: 188 LHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTV 286 LHH KHH YV N A+ +L +A D + + Sbjct: 1 LHHSKHHATYVKGVNDALSKLEEARANEDHAAI 33
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM2_BACAN (Superoxide dismutase [Mn] 2 OS=Bacillus anthracis GN=sodA2 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 5.743e-30 Identity = 52/128 (40.62%), Postives = 79/128 (61.72%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 705 GH HS+FW+ ++P GGGEP + + ID +F + + L ++S + GSG+ WL LD E L V +T NQD + + +PLL IDVWEHAYYL+Y+N +P+++ N W+ +NW ++ Y Sbjct: 79 GHYCHSLFWEVMSP--RGGGEP-NGDVAKVIDYYFNTFDNLKDQLSKAAISRFGSGYGWLVLDGE--ELSVMSTPNQDTPLQEGK--IPLLVIDVWEHAYYLKYQNRRPEFVTNWWHTVNWDRVNEKY 199 HSP 2 Score: 52.7582 bits (125), Expect = 5.743e-30 Identity = 23/53 (43.40%), Postives = 29/53 (54.72%), Query Frame = 2 Query: 110 LQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNK 268 + + LP L YDY LEP I + +HH KHH YV N N A+E + NK Sbjct: 1 MSSFQLPKLSYDYDELEPYIDSNTLSIHHGKHHATYVNNLNAALENYSELHNK 53
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODF_METTM (Superoxide dismutase [Fe] OS=Methanobacterium thermoautotrophicum (strain Marburg / DSM 2133) GN=sod PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.748e-30 Identity = 47/122 (38.52%), Postives = 66/122 (54.10%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWK 687 G+V H FW N+ P E GGEP L I+ FGS + ++ S + +GSGW L RL + + V P L+ +DVWEHAYY+ Y+NV+PDY++ WN++NWK Sbjct: 74 GYVLHLFFWGNMGPADECGGEPD-GRLAEYIEKDFGSFQRFKKEFSQAAVSAEGSGWAVLTYCQRTDRLFIMQVEKHN--VNVIPHFRILMVLDVWEHAYYIDYRNVRPDYVEAFWNIVNWK 192 HSP 2 Score: 56.9954 bits (136), Expect = 5.748e-30 Identity = 28/62 (45.16%), Postives = 39/62 (62.90%), Query Frame = 2 Query: 125 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIK 310 LP+LPY Y ALEP IS E +++HH+KHHQAYV N + +L A + V ++ A+K Sbjct: 8 LPELPYPYDALEPYISEEQLRIHHEKHHQAYVDGANGVLRKLDDAR---ENGEEVDIKAALK 66
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM2_BACCR (Superoxide dismutase [Mn] 2 OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=sodA2 PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.268e-29 Identity = 52/128 (40.62%), Postives = 79/128 (61.72%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 705 GH HS+FW+ ++P GGGEP + + ID +F + + L ++S + GSG+ WL LD E L V +T NQD + + +PLL IDVWEHAYYL+Y+N +P+++ N W+ +NW ++ Y Sbjct: 79 GHYCHSLFWEVMSP--RGGGEP-NGDVAKVIDYYFNTFDNLKDQLSKAAISRFGSGYGWLVLDGE--ELSVMSTPNQDTPLQEGK--IPLLVIDVWEHAYYLKYQNRRPEFVTNWWHTVNWDQVNEKY 199 HSP 2 Score: 51.2174 bits (121), Expect = 1.268e-29 Identity = 22/53 (41.51%), Postives = 28/53 (52.83%), Query Frame = 2 Query: 110 LQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNK 268 + + LP L YDY LEP I + +HH KHH YV N N +E + NK Sbjct: 1 MSSFQLPKLSYDYDELEPHIDSNTLSIHHGKHHATYVNNLNATLENYTELHNK 53
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_MYCKA (Superoxide dismutase [Mn] (Fragment) OS=Mycobacterium kansasii GN=sodA PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.663e-29 Identity = 57/122 (46.72%), Postives = 75/122 (61.48%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPT-LVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNW 684 GHVNH+I+WKNL+P GG+ P L AID FGS + + A +QGSGW LG DT +L++ + T P ++PLL +D+WEHA+YLQYKNVK D+ K WNV+NW Sbjct: 46 GHVNHTIWWKNLSP---NGGDKPTGELAAAIDEAFGSFDKFRAQFHAAATTVQGSGWAALGWDTLGNKLLIFQVYDHQ---TNFPLGIIPLLLLDMWEHAFYLQYKNVKVDFAKAFWNVVNW 161 HSP 2 Score: 37.3502 bits (85), Expect = 1.663e-29 Identity = 18/43 (41.86%), Postives = 24/43 (55.81%), Query Frame = 2 Query: 188 LHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFN 316 LHH KHH YV N AV +L +A K D S ++ + + FN Sbjct: 1 LHHSKHHATYVKGANDAVAKLEEARAKEDHSAILLNEKNLAFN 43
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODF_SYNE7 (Superoxide dismutase [Fe] OS=Synechococcus elongatus (strain PCC 7942) GN=sodB PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.151e-29 Identity = 51/126 (40.48%), Postives = 65/126 (51.59%), Query Frame = 1 Query: 331 NHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKN-IWNVMNWKYASDVY 705 NHS +W ++ P GG P +L I FGS E + + A GSGW WL LD L + T N D + T PLL IDVWEHAYYL Y+N +PDY+ + + NW +AS Y Sbjct: 78 NHSFYWNSIKP---NGGGAPTGALADKIAADFGSFENFVTEFKQAAATQFGSGWAWLVLDNG--TLKITKTGNADTPIAHGQT--PLLTIDVWEHAYYLDYQNRRPDYISTFVEKLANWDFASANY 196 HSP 2 Score: 58.151 bits (139), Expect = 2.151e-29 Identity = 24/40 (60.00%), Postives = 30/40 (75.00%), Query Frame = 2 Query: 125 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE 244 LP LP+DY+AL P I+ E ++ HH KHH AYV NYN AV+ Sbjct: 5 LPALPFDYTALAPYITKETLEFHHDKHHAAYVNNYNNAVK 44
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODF_BACSU (Probable superoxide dismutase [Fe] OS=Bacillus subtilis GN=sodF PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 4.712e-29 Identity = 48/130 (36.92%), Postives = 71/130 (54.62%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 711 GH HSIFW ++ H G P +L ID FGS A + + ++G GW L RL + TA + L ++ ++PLL +DVWEHAYYLQYKN + Y+ + WNV++W+ A +++ Sbjct: 148 GHYLHSIFWFSM---HPNGKRRPTGALFQMIDLSFGSYSAFKEHFTQASKKVEGVGWAILVWAPRSGRLEI-LTAEKHQLFSQWD-VIPLLPLDVWEHAYYLQYKNDRASYVDHWWNVVDWREAEKRFEQ 272 HSP 2 Score: 62.7734 bits (151), Expect = 4.712e-29 Identity = 31/65 (47.69%), Postives = 40/65 (61.54%), Query Frame = 2 Query: 125 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNG 319 LP LPY YSALEP IS +IM LHH KHHQ+YV NKA +L +A + + + + F+G Sbjct: 82 LPKLPYKYSALEPYISRDIMILHHTKHHQSYVDGLNKAESELKKARATKNYDLITHWERELAFHG 146
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODF_RHIME (Superoxide dismutase [Mn] OS=Rhizobium meliloti GN=sodB PE=1 SV=3) HSP 1 Score: 89.3521 bits (220), Expect = 1.048e-28 Identity = 49/129 (37.98%), Postives = 70/129 (54.26%), Query Frame = 1 Query: 325 HVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKN-IWNVMNWKYASDVYQ 708 H NH FWK + GGG L AI + G + SA GA GSGW WL + K + +T ++PLV A P+LG+DVWEH+YY+ Y+N +P YL+ + N++NW Y ++Y+ Sbjct: 74 HYNHVHFWKWMKK--GGGGTSLPGKLDAAIKSDLGGYDKFRADFSAAGAGQFGSGWAWLSVKNG-KLEISKTPNGENPLVHGA---TPILGVDVWEHSYYIDYRNARPKYLEAFVDNLINWDYVLELYE 196 HSP 2 Score: 58.5362 bits (140), Expect = 1.048e-28 Identity = 25/41 (60.98%), Postives = 30/41 (73.17%), Query Frame = 2 Query: 125 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQ 247 LP+LPYDY AL P +S E ++ HH KHH AYVTN NK E+ Sbjct: 5 LPNLPYDYDALAPYMSRETLEYHHDKHHLAYVTNGNKLAEE 45
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODF_LEGPH (Superoxide dismutase [Fe] OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=sodB PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.366e-28 Identity = 48/122 (39.34%), Postives = 69/122 (56.56%), Query Frame = 1 Query: 331 NHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYAS 696 NH+ +W +++P GGGEP L AI+ FGS A ++ S A GSGW WL D ++ T+ P+ L LL DVWEHAYY+ Y+N +PDY++ W+++NW +AS Sbjct: 73 NHTFYWHSMSP--NGGGEPK-GRLAEAINKSFGSFAAFKEQFSQTAATTFGSGWAWLVQDQSGALKIINTSNAGTPMTEG---LNALLTCDVWEHAYYIDYRNRRPDYIEAFWSLVNWDFAS 188 HSP 2 Score: 51.6026 bits (122), Expect = 1.366e-28 Identity = 22/42 (52.38%), Postives = 27/42 (64.29%), Query Frame = 2 Query: 116 TVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAV 241 T TLP LPY AL P +S E ++ H+ KHH YVTN NK + Sbjct: 2 TFTLPQLPYALDALAPHVSKETLEYHYGKHHNTYVTNLNKLI 43 The following BLAST results are available for this feature:
BLAST of CN185706 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 221
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185706 ID=CN185706; Name=CN185706; organism=Citrus sinensis; type=EST; length=712bpback to top |