CN185706
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODF_RICFE (Superoxide dismutase [Mn/Fe] OS=Rickettsia felis GN=sodB PE=3 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 1.296e-25 Identity = 49/124 (39.52%), Postives = 67/124 (54.03%), Query Frame = 1 Query: 331 NHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLK-NIWNVMNWKYASD 699 NHS FW ++ P +GGG+P L I+ FGS E ++ E GSGW WL RL + TAN + + PLL DVWEHAYY+ Y+N +PDY+ I +++NWK+ D Sbjct: 89 NHSFFWHSIKP--QGGGKPSGKILE-QINKDFGSFEGFCEQFKQEAVGQFGSGWAWLVYHDN--RLQIIKTANAGTPIANG--MKPLLACDVWEHAYYIDYRNKRPDYVDIFIKHMINWKFVED 205 HSP 2 Score: 48.9062 bits (115), Expect = 1.296e-25 Identity = 22/56 (39.29%), Postives = 31/56 (55.36%), Query Frame = 2 Query: 125 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQ 292 LPDLPYD + +P + E HH KHH AYV N N ++ + L K D +++ Sbjct: 16 LPDLPYDKESFKPHFTPETFDYHHGKHHNAYVQNLNNLLKDK-EELQKKDLEEIIE 70
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_BUCBP (Superoxide dismutase [Mn] OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=sodA PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.688e-25 Identity = 47/129 (36.43%), Postives = 71/129 (55.04%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQD-PLVTK---APTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYAS 696 GH+NHS+FWK L ++ +F S++ ++ + GSGW+WL + L + TT NQ+ PL+ K + +P+LG+D+WEHAYYL+YKN + DY+ WNV+NW S Sbjct: 77 GHINHSLFWKWLKL-----NTILKDDFKIILEKNFKSVDFFKKQFEKIALSHFGSGWIWL-IKKYDNTLRIVTTVNQNTPLMGKEISGISGIPILGLDLWEHAYYLKYKNNRSDYVNAFWNVVNWDEVS 199 HSP 2 Score: 52.7582 bits (125), Expect = 1.688e-25 Identity = 26/71 (36.62%), Postives = 36/71 (50.70%), Query Frame = 2 Query: 116 TVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNK----------AVEQLFQALNKVDTSTVVQLQ 298 T LP LPY Y++LEP + M +HH +HHQAY+ N N +E+L LN + + LQ Sbjct: 2 TYVLPSLPYSYNSLEPFFDEKTMIIHHTRHHQAYINNTNSILNGTHYENLLIEELISKLNILSIENKLALQ 72
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_BORBU (Superoxide dismutase [Fe] OS=Borrelia burgdorferi GN=sod PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.845e-25 Identity = 44/130 (33.85%), Postives = 67/130 (51.54%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 711 G+ NH+++++ L P G + I+ FGSL+ L + + GSGW WL L E V+ PL+ + P+LGIDVWEHAYYL+Y+N + +Y+ +NW+ S VY + Sbjct: 77 GYSNHTLYFRTLRP---GNKDNLFEKFKDDINAAFGSLDVLKANLKDTAMKIFGSGWAWLVLCPESGLKVISMPNQDSPLMN---SYKPILGIDVWEHAYYLKYQNRRIEYVDAFLKALNWEEVSKVYNE 200 HSP 2 Score: 53.5286 bits (127), Expect = 4.845e-25 Identity = 22/56 (39.29%), Postives = 37/56 (66.07%), Query Frame = 2 Query: 125 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQ 292 LP+L YDY A+EP I + M++HH KHH +V N N +E++ + ++ D S +++ Sbjct: 4 LPELGYDYDAVEPYIDAKTMEIHHSKHHNGFVMNLNSILEKMGK-IHLTDVSNILK 58
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODF_BACFR (Superoxide dismutase [Fe] OS=Bacteroides fragilis GN=sodB PE=3 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 4.854e-25 Identity = 46/128 (35.94%), Postives = 70/128 (54.69%), Query Frame = 1 Query: 328 VNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 711 +NH++++ AP + P LG AI FGS E ++ +A L GSGW WL +D + K + + +P+ L PLLG DVWEHAYYL Y+N + D++ +W +++W DV +K Sbjct: 73 LNHTLYFLQFAP--KPAKNEPAGKLGEAIKRDFGSFENFKKEFNAASVGLFGSGWAWLSVDKDGKLHITKEPNGSNPV---RAGLKPLLGFDVWEHAYYLDYQNRRADHVNKLWEIIDW----DVVEK 191 HSP 2 Score: 45.4394 bits (106), Expect = 4.854e-25 Identity = 28/77 (36.36%), Postives = 38/77 (49.35%), Query Frame = 2 Query: 116 TVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFN-GEVMSTTQF 343 T +P LPY +ALEP IS + + H+ KH Q YV N N V V+ GAI N G+V++ T + Sbjct: 2 TYEMPKLPYANNALEPVISQQTIDYHYGKHLQTYVNNLNSLVPGTEYEGKTVEAIVASAPDGAIFNNAGQVLNHTLY 78
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_PARCL (Superoxide dismutase [Mn], mitochondrial (Fragment) OS=Parastichopus californicus PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 6.396e-25 Identity = 46/96 (47.92%), Postives = 59/96 (61.46%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPT-LVPLLGIDV 606 G +NH IFW NL+P +GGG P L AI+ FGS ++ ++A A+QGSGW WLG D + L + T NQDPL +A T +VPL GIDV Sbjct: 54 GFINHCIFWTNLSP--QGGGVP-EGDLADAINRDFGSFDSFKTTLTAATVAIQGSGWGWLGFDPKTHHLKIATCVNQDPL--QATTGMVPLFGIDV 144 HSP 2 Score: 53.5286 bits (127), Expect = 6.396e-25 Identity = 25/51 (49.02%), Postives = 33/51 (64.71%), Query Frame = 2 Query: 167 ISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNG 319 I G+IM+LHH+KHH Y N N A E+L A + D ++ LQ A+KFNG Sbjct: 2 IIGDIMELHHKKHHATYTNNLNAAEEKLAAAHAEGDIGGMIALQPALKFNG 52
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODF_PLAVI (Superoxide dismutase [Fe] OS=Plasmodium vivax GN=SODB PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 8.215e-25 Identity = 45/127 (35.43%), Postives = 73/127 (57.48%), Query Frame = 1 Query: 331 NHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 711 NH+ +W ++ P + GGEP H + I FGS ++ S GSGW WL L+ K ++++T +P+ K T +P+L D+WEHAYY+ Y+N + Y+K WN++NW +A++ +K Sbjct: 73 NHTFYWDSMGP--DCGGEP-HGEIKEKIQEDFGSFNNFKEQFSNILCGHFGSGWGWLALNNNNKLVILQTHDAGNPI--KDNTGIPILTCDIWEHAYYIDYRNDRASYVKAWWNLVNWNFANENLKK 194 HSP 2 Score: 42.743 bits (99), Expect = 8.215e-25 Identity = 18/42 (42.86%), Postives = 24/42 (57.14%), Query Frame = 2 Query: 119 VTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE 244 +TLP L Y +AL P IS E + H+ KHH YV N ++ Sbjct: 3 ITLPKLKYALNALSPHISEETLNFHYNKHHAGYVNKLNTLIK 44
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODF_PLAFX (Superoxide dismutase [Fe] OS=Plasmodium falciparum (isolate HB3) GN=SODB PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 8.215e-25 Identity = 45/127 (35.43%), Postives = 73/127 (57.48%), Query Frame = 1 Query: 331 NHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 711 NH+ +W ++ P + GGEP H + I FGS ++ S GSGW WL L+ K ++++T +P+ K T +P+L D+WEHAYY+ Y+N + Y+K WN++NW +A++ +K Sbjct: 73 NHTFYWDSMGP--DCGGEP-HGEIKEKIQEDFGSFNNFKEQFSNILCGHFGSGWGWLALNNNNKLVILQTHDAGNPI--KDNTGIPILTCDIWEHAYYIDYRNDRASYVKAWWNLVNWNFANENLKK 194 HSP 2 Score: 42.743 bits (99), Expect = 8.215e-25 Identity = 18/42 (42.86%), Postives = 24/42 (57.14%), Query Frame = 2 Query: 119 VTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE 244 +TLP L Y +AL P IS E + H+ KHH YV N ++ Sbjct: 3 ITLPKLKYALNALSPHISEETLNFHYNKHHAGYVNKLNTLIK 44
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODF_PLAFA (Superoxide dismutase [Fe] OS=Plasmodium falciparum GN=SODB PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 8.215e-25 Identity = 45/127 (35.43%), Postives = 73/127 (57.48%), Query Frame = 1 Query: 331 NHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 711 NH+ +W ++ P + GGEP H + I FGS ++ S GSGW WL L+ K ++++T +P+ K T +P+L D+WEHAYY+ Y+N + Y+K WN++NW +A++ +K Sbjct: 73 NHTFYWDSMGP--DCGGEP-HGEIKEKIQEDFGSFNNFKEQFSNILCGHFGSGWGWLALNNNNKLVILQTHDAGNPI--KDNTGIPILTCDIWEHAYYIDYRNDRASYVKAWWNLVNWNFANENLKK 194 HSP 2 Score: 42.743 bits (99), Expect = 8.215e-25 Identity = 18/42 (42.86%), Postives = 24/42 (57.14%), Query Frame = 2 Query: 119 VTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE 244 +TLP L Y +AL P IS E + H+ KHH YV N ++ Sbjct: 3 ITLPKLKYALNALSPHISEETLNFHYNKHHAGYVNKLNTLIK 44
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODF_PLAF7 (Superoxide dismutase [Fe] OS=Plasmodium falciparum (isolate 3D7) GN=SODB PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 8.215e-25 Identity = 45/127 (35.43%), Postives = 73/127 (57.48%), Query Frame = 1 Query: 331 NHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 711 NH+ +W ++ P + GGEP H + I FGS ++ S GSGW WL L+ K ++++T +P+ K T +P+L D+WEHAYY+ Y+N + Y+K WN++NW +A++ +K Sbjct: 73 NHTFYWDSMGP--DCGGEP-HGEIKEKIQEDFGSFNNFKEQFSNILCGHFGSGWGWLALNNNNKLVILQTHDAGNPI--KDNTGIPILTCDIWEHAYYIDYRNDRASYVKAWWNLVNWNFANENLKK 194 HSP 2 Score: 42.743 bits (99), Expect = 8.215e-25 Identity = 18/42 (42.86%), Postives = 24/42 (57.14%), Query Frame = 2 Query: 119 VTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE 244 +TLP L Y +AL P IS E + H+ KHH YV N ++ Sbjct: 3 ITLPKLKYALNALSPHISEETLNFHYNKHHAGYVNKLNTLIK 44
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODF_NICPL (Superoxide dismutase [Fe], chloroplastic (Fragment) OS=Nicotiana plumbaginifolia GN=SODB PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 2.356e-24 Identity = 51/124 (41.13%), Postives = 71/124 (57.26%), Query Frame = 1 Query: 331 NHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTAN-QDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIW-NVMNWKYAS 696 NH FW+++ P GGGEP L I+ FGS +A +++ A A GSGW WL E K+L + T N ++PLV PLL IDVWEHAYYL ++N +PDY+ +++W+ S Sbjct: 77 NHQFFWESMKP--NGGGEPSGELLE-LINRDFGSYDAFVKEFKAAAATQFGSGWAWLAYKPEEKKLALVKTPNAENPLVLG---YTPLLTIDVWEHAYYLDFQNRRPDYISIFMEKLVSWEAVS 194 HSP 2 Score: 41.5874 bits (96), Expect = 2.356e-24 Identity = 17/36 (47.22%), Postives = 22/36 (61.11%), Query Frame = 2 Query: 137 PYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE 244 PY ALEP +S + H KHH+AYV N NK ++ Sbjct: 8 PYPMDALEPHMSSRTFEFHWGKHHRAYVDNLNKQID 43 The following BLAST results are available for this feature:
BLAST of CN185706 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 221
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185706 ID=CN185706; Name=CN185706; organism=Citrus sinensis; type=EST; length=712bpback to top |