CN185706
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODF_RICPR (Superoxide dismutase [Mn/Fe] OS=Rickettsia prowazekii GN=sodB PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.223e-22 Identity = 43/124 (34.68%), Postives = 67/124 (54.03%), Query Frame = 1 Query: 331 NHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLK-NIWNVMNWKYASD 699 NH+ FW ++ P GGG+P + I FGS E + E GSGW W+ + + K +++T+ P+V + P+L DVWEHAYY+ Y+N + DY+ I +++NWK+ D Sbjct: 89 NHTFFWYSIKP--HGGGKPS-GKVFEQISKDFGSFEQFCAQFKQEAVGQFGSGWTWV-VYHDNKLQIIKTSNAGTPIVN---FMKPILACDVWEHAYYIDYRNKRSDYIDIFIRHMINWKFVED 205 HSP 2 Score: 48.521 bits (114), Expect = 1.223e-22 Identity = 21/56 (37.50%), Postives = 31/56 (55.36%), Query Frame = 2 Query: 125 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQ 292 LPDLPYD + +P + E HH KHH +YV N N ++ + L K D +++ Sbjct: 16 LPDLPYDKESFKPHFTRETFDYHHGKHHNSYVQNLNNLIKDR-EELQKKDLEEIIE 70
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODF_ARATH (Superoxide dismutase [Fe], chloroplastic OS=Arabidopsis thaliana GN=SODB PE=1 SV=4) HSP 1 Score: 88.9669 bits (219), Expect = 2.069e-22 Identity = 49/123 (39.84%), Postives = 70/123 (56.91%), Query Frame = 1 Query: 331 NHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKN-IWNVMNWKYAS 696 NH FW+++ P GGG P L ++ F S E ++ +A A G+GW WL E K VV+T +PLV + PLL IDVWEHAYYL ++N +PDY+K + N+++W+ S Sbjct: 86 NHEFFWESMKP---GGGGKPSGELLALLERDFTSYEKFYEEFNAAAATQFGAGWAWLAYSNE-KLKVVKTPNAVNPLVLGS---FPLLTIDVWEHAYYLDFQNRRPDYIKTFMTNLVSWEAVS 201 HSP 2 Score: 37.7354 bits (86), Expect = 2.069e-22 Identity = 16/35 (45.71%), Postives = 22/35 (62.86%), Query Frame = 2 Query: 137 PYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAV 241 P+ ALEP +S + ++ H KHH+AYV N K V Sbjct: 17 PFALDALEPHMSKQTLEFHWGKHHRAYVDNLKKQV 51
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM1_HALSA (Superoxide dismutase [Mn] 1 OS=Halobacterium salinarium GN=sod1 PE=1 SV=3) HSP 1 Score: 66.2402 bits (160), Expect = 3.509e-22 Identity = 38/130 (29.23%), Postives = 63/130 (48.46%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 711 GH+ H++FW++++P GG+ P +L I FGS E + E AA SGW L D+ L N D P+L +DVWEH+YY Y + ++ + V++W ++ +++ Sbjct: 72 GHILHTLFWQSMSPA---GGDEPSGALADRIAADFGSYENW--RAEFEAAASAASGWALLVYDSHSNTLRNVAVDNHDEGALWGSH--PILALDVWEHSYYYDYGPDRGSFVDAFFEVVDWDEPTERFEQ 194 HSP 2 Score: 59.6918 bits (143), Expect = 3.509e-22 Identity = 28/65 (43.08%), Postives = 36/65 (55.38%), Query Frame = 2 Query: 125 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNG 319 LP LPYDY ALEP IS +++ HH HHQ YV +N A E L + D ++ G + NG Sbjct: 6 LPPLPYDYDALEPHISEQVLTWHHDTHHQGYVNGWNDAEETLAENRETGDHASTAGALGDVTHNG 70
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODF_AERPE (Superoxide dismutase [Mn/Fe] OS=Aeropyrum pernix GN=sod PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.418e-21 Identity = 54/133 (40.60%), Postives = 72/133 (54.14%), Query Frame = 1 Query: 286 RPVAGRYQVQRRGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNW 684 R V + GH+ H+IFW N+AP +GGG P + I+ FG E SA ++G GW L D + L + + L+T LVP+L IDVWEHAYYLQYKN + Y++N WNV+NW Sbjct: 63 RAVMRDFSFNYAGHIMHTIFWPNMAPPGKGGGTPG-GRVADLIEKQFGGFEKFKALFSAAAKTVEGVGWGVLAFDPLTEELRILQVEKHNVLMTAG--LVPILVIDVWEHAYYLQYKNDRGSYVENWWNVVNW 192
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODF_HELPY (Superoxide dismutase [Fe] OS=Helicobacter pylori GN=sodB PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.875e-21 Identity = 43/127 (33.86%), Postives = 68/127 (53.54%), Query Frame = 1 Query: 331 NHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRL-VVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 708 NH +W L+P + L A++ FGSLE + L GSGW W + + +++ +++T+ Q P+ K VPLL +DVWEHAYY+ +KN +P YL+ + +NW + S Y+ Sbjct: 72 NHDFYWDCLSPKATALSD----ELKGALEKDFGSLEKFKEDFIKSATTLFGSGWNWAAYNLDTQKIEIIQTSNAQTPVTDKK---VPLLVVDVWEHAYYIDHKNARPVYLEKFYGHINWHFVSQCYE 191 HSP 2 Score: 36.5798 bits (83), Expect = 2.875e-21 Identity = 15/41 (36.59%), Postives = 22/41 (53.66%), Query Frame = 2 Query: 122 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE 244 TL +LP+ ++ +S HH KHHQ YV N N ++ Sbjct: 3 TLRELPFAKDSMGDFLSPVAFDFHHGKHHQTYVNNLNNLIK 43
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODF_HELPJ (Superoxide dismutase [Fe] OS=Helicobacter pylori J99 GN=sodB PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.741e-21 Identity = 43/127 (33.86%), Postives = 68/127 (53.54%), Query Frame = 1 Query: 331 NHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRL-VVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 708 NH +W L+P + L A++ FGSLE + L GSGW W + + +++ +++T+ Q P+ K VPLL +DVWEHAYY+ +KN +P YL+ + +NW + S Y+ Sbjct: 72 NHDFYWDCLSPKATALSD----ELKEALEKDFGSLEKFKEDFIKSATTLFGSGWNWAAYNLDTQKIEIIQTSNAQTPVTDKK---VPLLVVDVWEHAYYIDHKNARPVYLEKFYGHVNWHFVSQCYE 191 HSP 2 Score: 36.5798 bits (83), Expect = 3.741e-21 Identity = 15/41 (36.59%), Postives = 22/41 (53.66%), Query Frame = 2 Query: 122 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE 244 TL +LP+ ++ +S HH KHHQ YV N N ++ Sbjct: 3 TLRELPFAKDSMGDFLSPVAFDFHHGKHHQTYVNNLNNLIK 43
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODF_CAMCO (Superoxide dismutase [Fe] OS=Campylobacter coli GN=sodB PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 4.862e-21 Identity = 41/130 (31.54%), Postives = 71/130 (54.62%), Query Frame = 1 Query: 331 NHSIFWKNLAPVHE----GGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 708 NH ++ + P+ G + ++L A++ FGSLE + + GSGW WL +T+ ++L T+N +T+ VPLL +DVWEHAYY+ ++N +P YL+ + +NW++ + Y+ Sbjct: 72 NHDFYFDCIKPITGCGCGGSCQSMDANLQAALEKEFGSLENFKAEFIKGATGVFGSGWFWLVYNTKNQKLEFVGTSNAATPITEDK--VPLLVVDVWEHAYYVDHRNARPAYLEKFYAHINWEFVAKAYE 199 HSP 2 Score: 41.9726 bits (97), Expect = 4.862e-21 Identity = 18/40 (45.00%), Postives = 22/40 (55.00%), Query Frame = 2 Query: 125 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE 244 L LPYD +A +S E HH KHH YVTN N ++ Sbjct: 4 LRKLPYDTNAFGDFLSAETFSYHHGKHHNTYVTNLNNLIK 43
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM2_HALSA (Superoxide dismutase [Mn] 2 OS=Halobacterium salinarium GN=sod2 PE=3 SV=3) HSP 1 Score: 63.1586 bits (152), Expect = 4.875e-21 Identity = 41/121 (33.88%), Postives = 60/121 (49.59%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNW 684 GH H++FW++++P +GGGEP +L I FGS E + E AA SGW L D K+L N D P+L +DVWEH+YY Y + ++ + V++W Sbjct: 72 GHYLHTMFWEHMSP--DGGGEPS-GALADRIAADFGSYENW--RAEFEVAAGAASGWALLVYDPVAKQLRNVAVDNHDEGALWGSH--PILALDVWEHSYYYDYGPDRGSFVDAFFEVIDW 185 HSP 2 Score: 58.9214 bits (141), Expect = 4.875e-21 Identity = 28/65 (43.08%), Postives = 36/65 (55.38%), Query Frame = 2 Query: 125 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNG 319 LP LPYDY ALEP IS +++ HH HHQ+YV N A E L + D ++ G + NG Sbjct: 6 LPSLPYDYDALEPHISEQVVTWHHDTHHQSYVDGLNSAEETLAENRETGDHASTAGALGDVTHNG 70
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODF_CAMJJ (Superoxide dismutase [Fe] OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=sodB PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 2.356e-20 Identity = 41/130 (31.54%), Postives = 70/130 (53.85%), Query Frame = 1 Query: 331 NHSIFWKNLAPVHE----GGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 708 NH ++ + P G + ++L A++ FGSLE + + GSGW WL +T+ ++L T+N +T+ VPLL +DVWEHAYY+ ++N +P YL+ + +NW++ + Y+ Sbjct: 72 NHDFYFDCIKPSTGCGCGGSCQSIDANLQAALEKEFGSLENFKAEFIKGATGVFGSGWFWLVYNTKNQKLEFVGTSNAATPITEDK--VPLLVVDVWEHAYYVDHRNARPAYLEKFYAHINWEFVAKAYE 199 HSP 2 Score: 41.9726 bits (97), Expect = 2.356e-20 Identity = 18/40 (45.00%), Postives = 22/40 (55.00%), Query Frame = 2 Query: 125 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE 244 L LPYD +A +S E HH KHH YVTN N ++ Sbjct: 4 LRKLPYDTNAFGDFLSAETFSYHHGKHHNTYVTNLNNLIK 43
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODF_CAMJE (Superoxide dismutase [Fe] OS=Campylobacter jejuni GN=sodB PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 2.356e-20 Identity = 41/130 (31.54%), Postives = 70/130 (53.85%), Query Frame = 1 Query: 331 NHSIFWKNLAPVHE----GGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 708 NH ++ + P G + ++L A++ FGSLE + + GSGW WL +T+ ++L T+N +T+ VPLL +DVWEHAYY+ ++N +P YL+ + +NW++ + Y+ Sbjct: 72 NHDFYFDCIKPSTGCGCGGSCQSIDANLQAALEKEFGSLENFKAEFIKGATGVFGSGWFWLVYNTKNQKLEFVGTSNAATPITEDK--VPLLVVDVWEHAYYVDHRNARPAYLEKFYAHINWEFVAKAYE 199 HSP 2 Score: 41.9726 bits (97), Expect = 2.356e-20 Identity = 18/40 (45.00%), Postives = 22/40 (55.00%), Query Frame = 2 Query: 125 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE 244 L LPYD +A +S E HH KHH YVTN N ++ Sbjct: 4 LRKLPYDTNAFGDFLSAETFSYHHGKHHNTYVTNLNNLIK 43 The following BLAST results are available for this feature:
BLAST of CN185706 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 221
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185706 ID=CN185706; Name=CN185706; organism=Citrus sinensis; type=EST; length=712bpback to top |