CN185706
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODF_BABBO (Superoxide dismutase [Fe] OS=Babesia bovis GN=SODB PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 2.364e-20 Identity = 47/122 (38.52%), Postives = 64/122 (52.46%), Query Frame = 1 Query: 331 NHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYAS 696 NH+ +W ++ P GGEP + I+ FGS A S A GSGW WL L + +V+T PL K PLL DVWEHAYY+ YKN + Y+ + WN++NW +A+ Sbjct: 73 NHTFYWNSMGP--NCGGEPT-GPIRKKIEEKFGSFSAFKTDFSNLLAGHFGSGWGWLVLKDDGTADIVQTHDAGSPL--KENLGRPLLCCDVWEHAYYIDYKNDRLSYINSWWNLVNWDFAN 189 HSP 2 Score: 38.5058 bits (88), Expect = 2.364e-20 Identity = 17/40 (42.50%), Postives = 21/40 (52.50%), Query Frame = 2 Query: 125 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE 244 LP LPY L P IS E + H+ KHH YV N ++ Sbjct: 5 LPALPYGMRELIPHISEETLSFHYGKHHAGYVNKLNSLIK 44
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM1_HALVO (Superoxide dismutase [Mn] 1 OS=Halobacterium volcanii GN=sod1 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.144e-19 Identity = 44/132 (33.33%), Postives = 66/132 (50.00%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRL--VVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 711 GH+ H +FW+N++P GG+ P L I FGS EA K E AA +GW L D+ +L VV +Q L P +L +DVWEH+YY Y + D++ + V++W + Y++ Sbjct: 72 GHILHDLFWQNMSPE---GGDEPEGLLAERIAEDFGSYEAW--KGEFEAAAGAAAGWALLVYDSFSNQLRNVVVDKHDQGALWGSHP----ILALDVWEHSYYHDYGPARGDFVSAFFEVVDWDEPAARYEQ 194 HSP 2 Score: 48.521 bits (114), Expect = 1.144e-19 Identity = 21/42 (50.00%), Postives = 26/42 (61.90%), Query Frame = 2 Query: 125 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQL 250 L LPY+Y ALEP IS +++ HH HHQ YV +N E L Sbjct: 6 LDPLPYEYDALEPHISEQVLTWHHDTHHQGYVNGWNADDETL 47
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM2_HALVO (Superoxide dismutase [Mn] 2 OS=Halobacterium volcanii GN=sod2 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.145e-19 Identity = 44/132 (33.33%), Postives = 66/132 (50.00%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRL--VVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 711 GH+ H +FW+N++P GG+ P L I FGS EA K E AA +GW L D+ +L VV +Q L P +L +DVWEH+YY Y + D++ + V++W + Y++ Sbjct: 71 GHILHDLFWQNMSPE---GGDEPEGLLAERIAEDFGSYEAW--KGEFEAAAGAAAGWALLVYDSFSNQLRNVVVDKHDQGALWGSHP----ILALDVWEHSYYHDYGPARGDFVSAFFEVVDWDEPAARYEQ 193 HSP 2 Score: 48.521 bits (114), Expect = 1.145e-19 Identity = 21/42 (50.00%), Postives = 26/42 (61.90%), Query Frame = 2 Query: 125 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQL 250 L LPY+Y ALEP IS +++ HH HHQ YV +N E L Sbjct: 5 LDPLPYEYDALEPHISEQVLTWHHDTHHQGYVNGWNADDETL 46
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODF_RHOCA (Superoxide dismutase [Fe] OS=Rhodobacter capsulatus GN=sodB PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.518e-19 Identity = 42/122 (34.43%), Postives = 65/122 (53.28%), Query Frame = 1 Query: 325 HVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWN-VMNWK 687 H NH+ FW+ + P G + +L A+ FGS+ + +A GA GSGW WL D++ + +T +PL L LG DVWEH+YY+ ++N +P YL N + ++NW+ Sbjct: 79 HWNHAQFWEMMGP---GEDKKMPGALEKALVESFGSVAKFKEDFAAAGAGQFGSGWAWLVKDSDGALKITKTENGVNPLCFGQTAL---LGCDVWEHSYYIDFRNKRPAYLTNFLDKLVNWE 194 HSP 2 Score: 40.0466 bits (92), Expect = 2.518e-19 Identity = 19/40 (47.50%), Postives = 25/40 (62.50%), Query Frame = 2 Query: 125 LPDLPYDYSALEP-AISGEIMQLHHQKHHQAYVTNYNKAV 241 LP LPY + AL +S E ++ HH HH+AYV N NK + Sbjct: 5 LPALPYAHDALASLGMSKETLEYHHDLHHKAYVDNGNKLI 44
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_MYCMA (Superoxide dismutase [Mn] (Fragment) OS=Mycobacterium malmoense GN=sodA PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 4.345e-19 Identity = 44/99 (44.44%), Postives = 57/99 (57.58%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHA 618 GHVNHSI+WKNL+P GG+ P L AID FGS + + SA LQGSGW LG D+ +L+ +Q V ++PLL +D+WEHA Sbjct: 45 GHVNHSIWWKNLSP---NGGDKPTGDLASAIDDAFGSFDKFRAQFSAAANGLQGSGWAVLGYDSLGDKLLTFQLYDQQANVPLG--IIPLLQVDMWEHA 138 HSP 2 Score: 34.6538 bits (78), Expect = 4.345e-19 Identity = 16/32 (50.00%), Postives = 19/32 (59.38%), Query Frame = 2 Query: 191 HHQKHHQAYVTNYNKAVEQLFQALNKVDTSTV 286 HH KHH AYV N AV +L +A K D S + Sbjct: 1 HHSKHHAAYVKGVNDAVAKLEEARAKDDHSAI 32
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODF_ACIAM (Superoxide dismutase [Fe] OS=Acidianus ambivalens GN=sod PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.467e-18 Identity = 52/148 (35.14%), Postives = 77/148 (52.03%), Query Frame = 1 Query: 295 AGRYQVQR---------RGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 711 +G+Y +Q GH HS++W+N+AP +GGG+P +G I+ +GS E + +L G+GW L + E L + T N L LL +D +EHAYYLQYKN + DY+ N WN++NW +A Q+ Sbjct: 63 SGQYDIQGLLRGLVFNINGHKLHSLYWQNMAPAGKGGGKPG-GVIGDLIEKQYGSFEKFKALFTEAANSLPGTGWTVLYYEVENGNLQIMTFENH--FQNHIAELPILLILDEFEHAYYLQYKNKRADYVNNWWNLVNWDFADKKLQQ 207
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODF_SOYBN (Superoxide dismutase [Fe], chloroplastic OS=Glycine max GN=SODB PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.573e-18 Identity = 45/125 (36.00%), Postives = 60/125 (48.00%), Query Frame = 1 Query: 331 NHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGL----------------DTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYL 657 NH FW+ + P GGG P L I+ FGS + + A A GSGW WL D + K +V+++ +PLV PLL IDVWEHAYYL ++N +PDY+ Sbjct: 102 NHDFFWECMKP---GGGGKPSGELLELIERDFGSFVKFLDEFKAAAATQFGSGWAWLAYRARKFDGENVANPPSPDEDNKLVVLKSPNAVNPLVWGG--YYPLLTIDVWEHAYYLDFQNRRPDYI 221 HSP 2 Score: 37.7354 bits (86), Expect = 1.573e-18 Identity = 15/35 (42.86%), Postives = 21/35 (60.00%), Query Frame = 2 Query: 137 PYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAV 241 PY + LEP +S + ++ H KHH+ YV N K V Sbjct: 33 PYPLNGLEPVMSQQTLEFHWGKHHKTYVENLKKQV 67
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_MYCCE (Superoxide dismutase [Mn] (Fragment) OS=Mycobacterium celatum GN=sodA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.103e-18 Identity = 42/102 (41.18%), Postives = 57/102 (55.88%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQD---PLVTKAPTLVPLLGIDVWEHA 618 GHVNH+I+WKNL+P GG+ P L AID FGS + + A +QGSGW LG D ++L++ + PL +VPLL +D+WEHA Sbjct: 45 GHVNHTIWWKNLSP---NGGDKPTGELAAAIDDAFGSFDKFRAQFHAAATTVQGSGWAALGWDNLGEKLLIFQVYDHQSNFPL-----GVVPLLLLDMWEHA 138 HSP 2 Score: 39.2762 bits (90), Expect = 2.103e-18 Identity = 19/42 (45.24%), Postives = 25/42 (59.52%), Query Frame = 2 Query: 191 HHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFN 316 HH KHH YV N A+E+L +A K D STV+ + + FN Sbjct: 1 HHSKHHATYVKGANDALEKLEEARAKDDQSTVLLNEKNLAFN 42
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_MYCMR (Superoxide dismutase [Mn] (Fragment) OS=Mycobacterium marinum GN=sodA PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 4.626e-18 Identity = 43/100 (43.00%), Postives = 57/100 (57.00%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPT-LVPLLGIDVWEHA 618 GHVNH+I+WKNL+P GG+ P L AID FGS + + A +QGSGW LG DT +L++ + T P +VPLL +D+WEHA Sbjct: 45 GHVNHTIWWKNLSP---NGGDKPTGELAAAIDEAFGSFDKFRAQFHAAATTVQGSGWAALGWDTLGNKLLIFQVYDHQ---TNFPLGIVPLLLLDMWEHA 138 HSP 2 Score: 34.6538 bits (78), Expect = 4.626e-18 Identity = 17/41 (41.46%), Postives = 23/41 (56.10%), Query Frame = 2 Query: 194 HQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFN 316 H KHH YV N AV +L +A K D ST++ + + FN Sbjct: 2 HSKHHATYVKGANDAVTKLEEARAKEDHSTILLNEKNLAFN 42
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_MYCSZ (Superoxide dismutase [Mn] (Fragment) OS=Mycobacterium szulgai GN=sodA PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.720e-17 Identity = 43/100 (43.00%), Postives = 57/100 (57.00%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPT-LVPLLGIDVWEHA 618 GHVNH+I+WKNL+P GG+ P L AID FGS + + A +QGSGW LG DT +L++ + T P +VPLL +D+WEHA Sbjct: 45 GHVNHTIWWKNLSP---NGGDKPTGELAAAIDDAFGSFDTFSAQFHAASTTVQGSGWAALGWDTLGNKLLIFQVYDHQ---TNFPLGIVPLLLLDMWEHA 138 HSP 2 Score: 31.9574 bits (71), Expect = 1.720e-17 Identity = 15/41 (36.59%), Postives = 23/41 (56.10%), Query Frame = 2 Query: 194 HQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFN 316 H KHH YV N AV +L +A + D S+++ + + FN Sbjct: 2 HSKHHATYVKGANDAVAKLEEARAQEDFSSILLSEKNLAFN 42 The following BLAST results are available for this feature:
BLAST of CN185706 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 221
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185706 ID=CN185706; Name=CN185706; organism=Citrus sinensis; type=EST; length=712bpback to top |