CN185706
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_MYCPH (Superoxide dismutase [Mn] (Fragment) OS=Mycobacterium phlei GN=sodA PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 2.375e-16 Identity = 44/99 (44.44%), Postives = 57/99 (57.58%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHA 618 GHVNH+I+WKNL+P GG+ P L AID FGS + + +A LQGSGW LG DT RL+ +Q V ++PLL +D+WEHA Sbjct: 45 GHVNHTIWWKNLSP---HGGDKPTGDLAAAIDDQFGSFDNFRAQFTAAANGLQGSGWAVLGYDTLGDRLLTFQLYDQQANVPLG--IIPLLLVDMWEHA 138 HSP 2 Score: 26.1794 bits (56), Expect = 2.375e-16 Identity = 10/22 (45.45%), Postives = 13/22 (59.09%), Query Frame = 2 Query: 194 HQKHHQAYVTNYNKAVEQLFQA 259 H KHH YV N A+ +L +A Sbjct: 2 HSKHHATYVKGVNDAIAKLEEA 23
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_MYCCH (Superoxide dismutase [Mn] (Fragment) OS=Mycobacterium chelonae GN=sodA PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.382e-15 Identity = 53/146 (36.30%), Postives = 72/146 (49.32%), Query Frame = 1 Query: 181 YAASSPEASPGLRY*LQQGGRAAFSSFEQSRHFHRRPVAGRYQVQRRGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHA 618 Y A A L ++G AA E++ FH GHVNHSI+WKNL+P GG+ P L AID FGS + + +A LQGSGW LG D+ ++L+ +Q V ++PLL +D+WEHA Sbjct: 9 YVAGVNSAVAKLEEAREKGDHAAIFLNEKNLAFHLG-----------GHVNHSIWWKNLSP---NGGDKPTGDLAAAIDDQFGSFDKFQAQFTAAANGLQGSGWAVLGYDSLGQKLLTFQLYDQQANVPLG--IIPLLQVDMWEHA 138
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_STROR (Superoxide dismutase [Mn/Fe] (Fragment) OS=Streptococcus oralis GN=sodA PE=3 SV=2) HSP 1 Score: 60.4622 bits (145), Expect = 7.156e-15 Identity = 35/93 (37.63%), Postives = 50/93 (53.76%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGI 600 GH+NH++FW+ + P P + L AID FGS E +A GSGW WL ++ E K L V +TANQD +++ P+LG+ Sbjct: 60 GHLNHALFWELMTPEKTA----PSAELAAAIDATFGSFEEFQAAFTAAATTRFGSGWAWLVVNKEGK-LEVTSTANQDTPISEGKK--PILGL 145 HSP 2 Score: 40.817 bits (94), Expect = 7.156e-15 Identity = 17/27 (62.96%), Postives = 19/27 (70.37%), Query Frame = 2 Query: 167 ISGEIMQLHHQKHHQAYVTNYNKAVEQ 247 I E M LHH KHHQAYV N N A+E+ Sbjct: 2 IDAETMHLHHDKHHQAYVNNANAALEK 28
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_STRMT (Superoxide dismutase [Mn/Fe] (Fragment) OS=Streptococcus mitis GN=sodA PE=3 SV=1) HSP 1 Score: 60.4622 bits (145), Expect = 2.041e-14 Identity = 35/93 (37.63%), Postives = 50/93 (53.76%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGI 600 GH+NH++FW+ + P P + L AID FGS E +A GSGW WL ++ E K L V +TANQD +++ P+LG+ Sbjct: 60 GHLNHALFWELMTPEKTA----PSAELAAAIDATFGSFEEFQAAFTAAATTRFGSGWAWLVVNKEGK-LEVTSTANQDTPISEGKK--PILGL 145 HSP 2 Score: 39.2762 bits (90), Expect = 2.041e-14 Identity = 16/27 (59.26%), Postives = 18/27 (66.67%), Query Frame = 2 Query: 167 ISGEIMQLHHQKHHQAYVTNYNKAVEQ 247 I E M LHH KHHQ YV N N A+E+ Sbjct: 2 IDAETMHLHHDKHHQTYVNNANAALEK 28
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_STRPA (Superoxide dismutase [Mn/Fe] (Fragment) OS=Streptococcus parasanguis GN=sodA PE=3 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 4.480e-14 Identity = 35/93 (37.63%), Postives = 50/93 (53.76%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGI 600 GH+NH++FW+ + P P + L AID FGS E +A GSGW W ++ E K L V +TANQD +++ T P+LG+ Sbjct: 60 GHLNHALFWELMTPEQTA----PSAELAAAIDATFGSFEDFKAAFTAAATTRFGSGWAWSVVNKEGK-LEVTSTANQDTPLSEGKT--PILGL 145 HSP 2 Score: 38.891 bits (89), Expect = 4.480e-14 Identity = 16/27 (59.26%), Postives = 18/27 (66.67%), Query Frame = 2 Query: 167 ISGEIMQLHHQKHHQAYVTNYNKAVEQ 247 I E M LHH KHHQ YV N N A+E+ Sbjct: 2 IDEETMHLHHDKHHQTYVNNVNAALEK 28
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_STRSL (Superoxide dismutase [Mn/Fe] (Fragment) OS=Streptococcus salivarius GN=sodA PE=3 SV=1) HSP 1 Score: 58.9214 bits (141), Expect = 3.639e-13 Identity = 35/89 (39.33%), Postives = 51/89 (57.30%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVT--KAPTL 582 GH+NH++FW+ L+P + P + + AI+ FGS EA + +A GSGW WL ++ E K L V +TANQD ++ K P L Sbjct: 60 GHLNHALFWELLSPEKQ----EPTAEVAAAINEAFGSFEAFQEAFTAAATTRFGSGWAWLVVNDEGK-LEVVSTANQDTPISDGKKPIL 143 HSP 2 Score: 36.5798 bits (83), Expect = 3.639e-13 Identity = 15/27 (55.56%), Postives = 17/27 (62.96%), Query Frame = 2 Query: 167 ISGEIMQLHHQKHHQAYVTNYNKAVEQ 247 I E M LHH KHH YV N N A+E+ Sbjct: 2 IDAETMTLHHDKHHATYVANANAALEK 28
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODF_AQUAE (Superoxide dismutase [Fe] OS=Aquifex aeolicus GN=sodB PE=3 SV=3) HSP 1 Score: 74.3294 bits (181), Expect = 7.053e-13 Identity = 46/130 (35.38%), Postives = 68/130 (52.31%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 711 G V H +++ LAP GG P +L I+ G L+A ++ A AA+ GW LGLD RLVV + V L+PL+ ID +EHAYY+ YKN +P Y+ + +NW ++ ++K Sbjct: 78 GVVLHELYFGMLAP---GGKGEPSEALKKKIEEDLGGLDACTNELKA--AAIAFRGWAILGLDIFSGRLVVNGLDAHN--VYNLTGLIPLIVIDTYEHAYYVDYKNKRPPYIDAFFKNINWDVVNERFEK 200
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODF_AQUPY (Superoxide dismutase [Fe] OS=Aquifex pyrophilus GN=sodB PE=1 SV=3) HSP 1 Score: 72.7886 bits (177), Expect = 2.052e-12 Identity = 45/130 (34.62%), Postives = 67/130 (51.54%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 711 G V H +++ L P GG P +L I+ G L+A ++ A AA+ GW LGLD RLVV + V L+PL+ ID +EHAYY+ YKN +P Y+ + +NW ++ ++K Sbjct: 78 GVVLHELYFGMLTP---GGKGEPSEALKKKIEEDIGGLDACTNELKA--AAMAFRGWAILGLDIFSGRLVVNGLDAHN--VYNLTGLIPLIVIDTYEHAYYVDYKNKRPPYIDAFFKNINWDVVNERFEK 200
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_STRPO (Superoxide dismutase [Mn/Fe] (Fragment) OS=Streptococcus porcinus GN=sodA PE=3 SV=1) HSP 1 Score: 56.6102 bits (135), Expect = 8.395e-12 Identity = 34/93 (36.56%), Postives = 51/93 (54.84%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGI 600 GH+NH++FW+ L+P S + AID FGS E+ + + GSGW WL ++ E K L V +TANQD +++ P+LG+ Sbjct: 60 GHLNHALFWELLSPEKT----EVTSDVASAIDEAFGSFESFKDAFTTAATSRFGSGWAWLVVNKEGK-LEVMSTANQDTPISEGKQ--PILGL 145 HSP 2 Score: 34.2686 bits (77), Expect = 8.395e-12 Identity = 14/24 (58.33%), Postives = 16/24 (66.67%), Query Frame = 2 Query: 176 EIMQLHHQKHHQAYVTNYNKAVEQ 247 E M LHH KHH YV N N A+E+ Sbjct: 5 ETMILHHDKHHATYVANANAALEK 28
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_STRCB (Superoxide dismutase [Mn/Fe] (Fragment) OS=Streptococcus canis GN=sodA PE=3 SV=1) HSP 1 Score: 55.8398 bits (133), Expect = 8.395e-12 Identity = 29/83 (34.94%), Postives = 49/83 (59.04%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTK 570 GH+NH++FW+ L+P + + + AID FGS +A ++ +A GSGW WL ++ E +L + +TANQD +++ Sbjct: 60 GHLNHALFWELLSPEKQ----EITADVAQAIDEAFGSFDAFKEQFTAAATGRFGSGWAWLVVNKE-GQLEITSTANQDTPISE 137 HSP 2 Score: 35.039 bits (79), Expect = 8.395e-12 Identity = 14/24 (58.33%), Postives = 16/24 (66.67%), Query Frame = 2 Query: 176 EIMQLHHQKHHQAYVTNYNKAVEQ 247 E M LHH KHH YV N N A+E+ Sbjct: 5 ETMTLHHDKHHATYVANANAALEK 28 The following BLAST results are available for this feature:
BLAST of CN185706 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 221
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185706 ID=CN185706; Name=CN185706; organism=Citrus sinensis; type=EST; length=712bpback to top |