CN185706
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_CORDI (Superoxide dismutase [Mn] OS=Corynebacterium diphtheriae GN=sodA PE=3 SV=2) HSP 1 Score: 125.176 bits (313), Expect = 7.713e-40 Identity = 65/121 (53.72%), Postives = 76/121 (62.81%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNW 684 GH NHSIFWKNL+P GGGEP +L AI FGS E SA LQGSGW LG D RLV+E +Q ++ L PLL +D+WEHA+YLQYKNVK DY+K +WNV NW Sbjct: 72 GHTNHSIFWKNLSP--NGGGEPT-GALAEAIAKEFGSFEKFKDHFSAAALGLQGSGWAVLGYDHIGGRLVIEQLTDQQGNISA--NLTPLLMLDMWEHAFYLQYKNVKADYVKAVWNVFNW 187 HSP 2 Score: 60.077 bits (144), Expect = 7.713e-40 Identity = 29/58 (50.00%), Postives = 36/58 (62.07%), Query Frame = 2 Query: 116 TVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVV 289 T LP+L Y Y ALEP I+ EIM+LHH KHH YV N A+E+L +A + VV Sbjct: 2 TYALPELDYAYDALEPHIAAEIMELHHSKHHANYVNGANAALEKLQKARENGEIGAVV 59
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_THET8 (Superoxide dismutase [Mn] OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=sodA PE=1 SV=2) HSP 1 Score: 122.094 bits (305), Expect = 2.221e-39 Identity = 62/130 (47.69%), Postives = 83/130 (63.85%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 711 GH+NHS+FW+ L P GG + P L AID FG +AL +K++ GSGW WL D F +L V +T NQD V + T P++GIDVWEHAYYL+Y+N + DYL+ IWNV+NW A + ++K Sbjct: 80 GHLNHSLFWRLLTP---GGAKEPVGELKKAIDEQFGGFQALKEKLTQAAMGRFGSGWAWLVKDP-FGKLHVLSTPNQDNPVMEGFT--PIVGIDVWEHAYYLKYQNRRADYLQAIWNVLNWDVAEEFFKK 203 HSP 2 Score: 61.6178 bits (148), Expect = 2.221e-39 Identity = 32/73 (43.84%), Postives = 46/73 (63.01%), Query Frame = 2 Query: 125 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQ--------LQGAIKFNG 319 LPDL Y Y ALEP I + M++HHQKHH AYVTN N A+E+ + L+ V+ +++ +Q A++ NG Sbjct: 7 LPDLGYPYEALEPHIDAKTMEIHHQKHHGAYVTNLNAALEK-YPYLHGVEVEVLLRHLAALPQDIQTAVRNNG 78
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_THET2 (Superoxide dismutase [Mn] OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=sodA PE=3 SV=2) HSP 1 Score: 122.094 bits (305), Expect = 2.221e-39 Identity = 62/130 (47.69%), Postives = 83/130 (63.85%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 711 GH+NHS+FW+ L P GG + P L AID FG +AL +K++ GSGW WL D F +L V +T NQD V + T P++GIDVWEHAYYL+Y+N + DYL+ IWNV+NW A + ++K Sbjct: 80 GHLNHSLFWRLLTP---GGAKEPVGELKKAIDEQFGGFQALKEKLTQAAMGRFGSGWAWLVKDP-FGKLHVLSTPNQDNPVMEGFT--PIVGIDVWEHAYYLKYQNRRADYLQAIWNVLNWDVAEEFFKK 203 HSP 2 Score: 61.6178 bits (148), Expect = 2.221e-39 Identity = 32/73 (43.84%), Postives = 46/73 (63.01%), Query Frame = 2 Query: 125 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQ--------LQGAIKFNG 319 LPDL Y Y ALEP I + M++HHQKHH AYVTN N A+E+ + L+ V+ +++ +Q A++ NG Sbjct: 7 LPDLGYPYEALEPHIDAKTMEIHHQKHHGAYVTNLNAALEK-YPYLHGVEVEVLLRHLAALPQDIQTAVRNNG 78
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_MYCPA (Superoxide dismutase [Mn] OS=Mycobacterium paratuberculosis GN=sodA PE=1 SV=3) HSP 1 Score: 122.865 bits (307), Expect = 3.770e-39 Identity = 62/121 (51.24%), Postives = 76/121 (62.81%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNW 684 GHVNHSI+WKNL+P GG+ P L AID FGS + + SA LQGSGW LG DT RL+ +Q V ++PLL +D+WEHA+YLQYKNVK DY+K WNV+NW Sbjct: 72 GHVNHSIWWKNLSP---DGGDKPTGELAAAIDDAFGSFDKFRAQFSAAANGLQGSGWAVLGYDTVGSRLLTFQLYDQQANVPLG--IIPLLQVDMWEHAFYLQYKNVKADYVKAFWNVVNW 187 HSP 2 Score: 60.077 bits (144), Expect = 3.770e-39 Identity = 27/55 (49.09%), Postives = 37/55 (67.27%), Query Frame = 2 Query: 122 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTV 286 TLPDL +DY+ALEP ISG+I ++HH KHH YV N A+ +L +A D + + Sbjct: 5 TLPDLDWDYAALEPHISGQINEIHHTKHHATYVKGVNDALAKLEEARANEDHAAI 59
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_MYCSM (Superoxide dismutase [Mn] OS=Mycobacterium smegmatis GN=sodA PE=1 SV=4) HSP 1 Score: 119.783 bits (299), Expect = 3.770e-39 Identity = 59/121 (48.76%), Postives = 76/121 (62.81%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNW 684 GH+NHSI+WKNL+P GG+ P L AID FGS + + +A LQGSGW LG D+ RL+ +Q V ++PLL +D+WEHA+YLQYKNVK DY+K WNV+NW Sbjct: 72 GHINHSIWWKNLSP---NGGDKPTGELAAAIDDQFGSFDKFQAQFTAAANGLQGSGWAVLGYDSLGGRLLTFQLYDQQANVPLG--IIPLLQVDMWEHAFYLQYKNVKADYVKAFWNVVNW 187 HSP 2 Score: 63.1586 bits (152), Expect = 3.770e-39 Identity = 29/55 (52.73%), Postives = 36/55 (65.45%), Query Frame = 2 Query: 122 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTV 286 TLPDL YDY ALEP ISG+I +LHH KHH YV N A+ +L +A D + + Sbjct: 5 TLPDLDYDYGALEPHISGQINELHHSKHHATYVKGVNDAIAKLEEARANGDHAAI 59
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_MYCS2 (Superoxide dismutase [Mn] OS=Mycobacterium smegmatis GN=sodA PE=1 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 3.770e-39 Identity = 59/121 (48.76%), Postives = 76/121 (62.81%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNW 684 GH+NHSI+WKNL+P GG+ P L AID FGS + + +A LQGSGW LG D+ RL+ +Q V ++PLL +D+WEHA+YLQYKNVK DY+K WNV+NW Sbjct: 72 GHINHSIWWKNLSP---NGGDKPTGELAAAIDDQFGSFDKFQAQFTAAANGLQGSGWAVLGYDSLGGRLLTFQLYDQQANVPLG--IIPLLQVDMWEHAFYLQYKNVKADYVKAFWNVVNW 187 HSP 2 Score: 63.1586 bits (152), Expect = 3.770e-39 Identity = 29/55 (52.73%), Postives = 36/55 (65.45%), Query Frame = 2 Query: 122 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTV 286 TLPDL YDY ALEP ISG+I +LHH KHH YV N A+ +L +A D + + Sbjct: 5 TLPDLDYDYGALEPHISGQINELHHSKHHATYVKGVNDAIAKLEEARANGDHAAI 59
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_THEAQ (Superoxide dismutase [Mn] OS=Thermus aquaticus GN=sodA PE=3 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 3.771e-39 Identity = 62/129 (48.06%), Postives = 81/129 (62.79%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 708 GH+NHS+FW+ L P GG + P L AID FG AL +K++ GSGW WL D F +L V +TANQD V P++GIDVWEHAYYL+Y+N + DYL+ IWNV+NW A ++Y+ Sbjct: 80 GHLNHSLFWRLLTP---GGAKEPVGELKKAIDEQFGGFAALKEKLTQAAMGRFGSGWAWLVKDP-FGKLHVISTANQDNPVMGG--FAPIVGIDVWEHAYYLKYQNRRADYLQAIWNVLNWDVAEEIYK 202 HSP 2 Score: 60.4622 bits (145), Expect = 3.771e-39 Identity = 31/72 (43.06%), Postives = 42/72 (58.33%), Query Frame = 2 Query: 125 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQL-------FQALNKVDTSTVVQLQGAIKFNG 319 LP+L Y Y ALEP I M++HHQKHH AYVTN N A+E+ + L + T+ +Q A++ NG Sbjct: 7 LPELGYPYEALEPHIDARTMEIHHQKHHGAYVTNLNAALEKYPYLQGAEVETLLRHLTALPADIQAAVRNNG 78
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_MYCAV (Superoxide dismutase [Mn] OS=Mycobacterium avium GN=sodA PE=3 SV=3) HSP 1 Score: 122.479 bits (306), Expect = 4.911e-39 Identity = 62/121 (51.24%), Postives = 76/121 (62.81%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNW 684 GHVNHSI+WKNL+P GG+ P L AID FGS + + SA LQGSGW LG DT RL+ +Q V ++PLL +D+WEHA+YLQYKNVK DY+K WNV+NW Sbjct: 72 GHVNHSIWWKNLSP---DGGDKPTGELAAAIDDAFGSFDKFRAQFSAAANGLQGSGWAVLGYDTLGSRLLTFQLYDQQANVPLG--IIPLLQVDMWEHAFYLQYKNVKADYVKAFWNVVNW 187 HSP 2 Score: 60.077 bits (144), Expect = 4.911e-39 Identity = 27/55 (49.09%), Postives = 37/55 (67.27%), Query Frame = 2 Query: 122 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTV 286 TLPDL +DY+ALEP ISG+I ++HH KHH YV N A+ +L +A D + + Sbjct: 5 TLPDLDWDYAALEPHISGQINEIHHTKHHATYVKGVNDALAKLEEARANEDHAAI 59
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_AGABI (Superoxide dismutase [Mn], mitochondrial OS=Agaricus bisporus GN=sod PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 6.403e-39 Identity = 65/128 (50.78%), Postives = 86/128 (67.19%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 705 GH+NHS+FW+NLAP GG+ L AID FG L+ L ++ + A +QGSGW WLG++ KRL + TT NQDPL+ LVP++G+D+WEHA+YLQY NVK DYL IW+V+N+ A Y Sbjct: 68 GHINHSLFWQNLAPAAGAGGQLKPGPLKDAIDQTFGGLDNLKKEFNTTTAGIQGSGWGWLGVNPSNKRLEISTTPNQDPLL----NLVPIIGVDIWEHAFYLQYLNVKADYLNAIWSVINFDEAQRRY 191 HSP 2 Score: 44.2838 bits (103), Expect = 6.403e-39 Identity = 19/26 (73.08%), Postives = 22/26 (84.62%), Query Frame = 2 Query: 125 LPDLPYDYSALEPAISGEIMQLHHQK 202 LPDLPY Y ALEP IS +IM+LHH+K Sbjct: 5 LPDLPYAYDALEPYISRQIMELHHKK 30
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_MYCLP (Superoxide dismutase [Mn] OS=Mycobacterium lepraemurium GN=sodA PE=3 SV=3) HSP 1 Score: 121.709 bits (304), Expect = 1.086e-38 Identity = 61/121 (50.41%), Postives = 76/121 (62.81%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNW 684 GHVNHS++WKNL+P GG+ P L AID FGS + + SA LQGSGW LG DT RL+ +Q V ++PLL +D+WEHA+YLQYKNVK DY+K WNV+NW Sbjct: 72 GHVNHSLWWKNLSP---DGGDKPTGELAAAIDDAFGSFDKFRAQFSAAANGLQGSGWAVLGYDTLGSRLLTFQLYDQQANVPLG--IIPLLQVDMWEHAFYLQYKNVKADYVKAFWNVVNW 187 HSP 2 Score: 59.6918 bits (143), Expect = 1.086e-38 Identity = 27/55 (49.09%), Postives = 36/55 (65.45%), Query Frame = 2 Query: 122 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTV 286 TLPDL +DY ALEP ISG+I ++HH KHH YV N A+ +L +A D + + Sbjct: 5 TLPDLDWDYEALEPHISGQINEIHHTKHHATYVKGVNDALAKLEEARANEDHAAI 59 The following BLAST results are available for this feature:
BLAST of CN185706 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 221
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185706 ID=CN185706; Name=CN185706; organism=Citrus sinensis; type=EST; length=712bpback to top |