CN185706
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODF_MYCTU (Superoxide dismutase [Fe] OS=Mycobacterium tuberculosis GN=sodB PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.174e-37 Identity = 57/122 (46.72%), Postives = 74/122 (60.66%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPT-LVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNW 684 GHVNH+I+WKNL+P GG+ P L AI FGS + + A +QGSGW LG DT +L++ + T P +VPLL +D+WEHA+YLQYKNVK D+ K WNV+NW Sbjct: 72 GHVNHTIWWKNLSP---NGGDKPTGELAAAIADAFGSFDKFRAQFHAAATTVQGSGWAALGWDTLGNKLLIFQVYDHQ---TNFPLGIVPLLLLDMWEHAFYLQYKNVKVDFAKAFWNVVNW 187 HSP 2 Score: 67.3958 bits (163), Expect = 1.174e-37 Identity = 33/65 (50.77%), Postives = 42/65 (64.62%), Query Frame = 2 Query: 122 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFN 316 TLPDL +DY ALEP ISG+I +LHH KHH YV N AV +L +A K D S ++ + + FN Sbjct: 5 TLPDLDWDYGALEPHISGQINELHHSKHHATYVKGANDAVAKLEEARAKEDHSAILLNEKNLAFN 69
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODF_MYCBO (Superoxide dismutase [Fe] OS=Mycobacterium bovis GN=sodB PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.174e-37 Identity = 57/122 (46.72%), Postives = 74/122 (60.66%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPT-LVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNW 684 GHVNH+I+WKNL+P GG+ P L AI FGS + + A +QGSGW LG DT +L++ + T P +VPLL +D+WEHA+YLQYKNVK D+ K WNV+NW Sbjct: 72 GHVNHTIWWKNLSP---NGGDKPTGELAAAIADAFGSFDKFRAQFHAAATTVQGSGWAALGWDTLGNKLLIFQVYDHQ---TNFPLGIVPLLLLDMWEHAFYLQYKNVKVDFAKAFWNVVNW 187 HSP 2 Score: 67.3958 bits (163), Expect = 1.174e-37 Identity = 33/65 (50.77%), Postives = 42/65 (64.62%), Query Frame = 2 Query: 122 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFN 316 TLPDL +DY ALEP ISG+I +LHH KHH YV N AV +L +A K D S ++ + + FN Sbjct: 5 TLPDLDWDYGALEPHISGQINELHHSKHHATYVKGANDAVAKLEEARAKEDHSAILLNEKNLAFN 69
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM1_PLEBO (Superoxide dismutase [Mn] 1 OS=Plectonema boryanum GN=sodA1 PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 5.721e-37 Identity = 63/147 (42.86%), Postives = 92/147 (62.59%), Query Frame = 1 Query: 271 RHFHRRPVAGRYQVQRRG--HVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 705 ++ ++ P A R +++ G HVNH++FW+ +AP + GG P ++ AID FGS +A Q+ + GA GSGW WL D + K L + +TANQD + P P+LG DVWEHAYYL+Y+N + +YL N WNV+NW+ + Y Sbjct: 100 QNLNQVPEAIRTKIRNNGGGHVNHTMFWQIMAP--KAGGTPT-GAVAKAIDQTFGSFDAFKQQFNKAGADRFGSGWAWLVSDRQGK-LSITSTANQDNPLMSNPNAYPILGNDVWEHAYYLKYQNRRAEYLTNWWNVVNWQAVNQRY 242 HSP 2 Score: 55.8398 bits (133), Expect = 5.721e-37 Identity = 28/60 (46.67%), Postives = 35/60 (58.33%), Query Frame = 2 Query: 125 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYN-----------KAVEQLFQALNKV 271 L LPYDY+ALEP I + M+LHH KHH YV N N ++V+ L Q LN+V Sbjct: 46 LDPLPYDYAALEPYIDAQTMRLHHDKHHATYVNNINETLKAYPDLQKQSVDSLIQNLNQV 105
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_BACSU (Superoxide dismutase [Mn] OS=Bacillus subtilis GN=sodA PE=1 SV=5) HSP 1 Score: 112.849 bits (281), Expect = 9.749e-37 Identity = 55/130 (42.31%), Postives = 81/130 (62.31%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 711 GH NH +FW L+P GGGEP +L I++ FGS + ++ +A A GSGW WL ++ +L + +T NQD +++ T P+LG+DVWEHAYYL Y+N +PDY+ WNV+NW + +Y + Sbjct: 78 GHANHKLFWTLLSP--NGGGEPT-GALAEEINSVFGSFDKFKEQFAAAAAGRFGSGWAWLVVNNG--KLEITSTPNQDSPLSEGKT--PILGLDVWEHAYYLNYQNRRPDYISAFWNVVNWDEVARLYSE 200 HSP 2 Score: 62.003 bits (149), Expect = 9.749e-37 Identity = 31/57 (54.39%), Postives = 33/57 (57.89%), Query Frame = 2 Query: 125 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQL 295 LP+LPY Y ALEP I E M +HH KHH YVTN NKAVE NK V L Sbjct: 5 LPELPYAYDALEPHIDKETMTIHHTKHHNTYVTNLNKAVEGNTALANKSVEELVADL 61
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODF_METJ (Superoxide dismutase [Mn/Fe] OS=Methylomonas J GN=sodB PE=1 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.270e-36 Identity = 60/130 (46.15%), Postives = 81/130 (62.31%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 711 GH NHS+FWK L P GGGEP +L AI + G L+ + + GSGW WL + E K+LVVE+T NQD ++ T P+LG+DVWEHAYYL+Y+N +P+Y+ +NV+NW S YQ+ Sbjct: 76 GHANHSLFWKVLTP--NGGGEPK-GALADAIKSDIGGLDTFKEAFTKAALTRFGSGWAWLSVTPE-KKLVVESTGNQDSPLSTGNT--PILGLDVWEHAYYLKYQNRRPEYIGAFFNVVNWDEVSRRYQE 199 HSP 2 Score: 58.151 bits (139), Expect = 1.270e-36 Identity = 30/72 (41.67%), Postives = 42/72 (58.33%), Query Frame = 2 Query: 122 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE------QLFQALNKVDTSTVVQLQGAIKFNG 319 TLP L Y Y+ALEP I + M++HH KHHQ Y+ N N A+E + +AL + S L+G ++ NG Sbjct: 3 TLPPLDYAYTALEPHIDAQTMEIHHTKHHQTYINNVNAALEGTSFANEPVEALLQKLDSLPENLRGPVRNNG 74
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_ENTFA (Superoxide dismutase [Fe] OS=Enterococcus faecalis GN=sodA PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 2.155e-36 Identity = 53/128 (41.41%), Postives = 78/128 (60.94%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 705 GH NH+ FW+ +AP GG+P ++ AID FGS + + GSGW WL ++ +L + +T NQD + T P+LG+DVWEHAYYL+YKNV+PDY++ WNV+NW ++++ Sbjct: 78 GHANHTFFWEIMAP--NAGGQPT-GAIKEAIDETFGSFDEMKAAFKTAATGRFGSGWAWLVVNNG--KLEITSTPNQDSPLMDGQT--PVLGLDVWEHAYYLKYKNVRPDYIEAFWNVVNWDKVNELF 198 HSP 2 Score: 63.5438 bits (153), Expect = 2.155e-36 Identity = 28/44 (63.64%), Postives = 31/44 (70.45%), Query Frame = 2 Query: 116 TVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQ 247 T TLP+LPY Y ALEP I E M LHH KHH YVTN N A+E+ Sbjct: 2 TYTLPELPYAYDALEPYIDVETMHLHHDKHHNTYVTNLNAAIEK 45
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM1_BACAN (Superoxide dismutase [Mn] 1 OS=Bacillus anthracis GN=sodA1 PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.656e-36 Identity = 58/130 (44.62%), Postives = 80/130 (61.54%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 711 GH NH+ FW L+P GGG+P L AI+ FGS +A ++ + GA GSGW WL ++ L V +T NQD +T+ T P++G+DVWEHAYYL Y+N +PDY+ WNV++W A YQ+ Sbjct: 79 GHANHTFFWTILSP--NGGGQPV-GELATAIEAKFGSFDAFKEEFAKAGATRFGSGWAWLVVNNG--ELEVTSTPNQDSPLTEGKT--PVIGLDVWEHAYYLNYQNRRPDYIGAFWNVVDWNAAEKRYQE 201 HSP 2 Score: 57.3806 bits (137), Expect = 3.656e-36 Identity = 31/76 (40.79%), Postives = 42/76 (55.26%), Query Frame = 2 Query: 125 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYN-----------KAVEQLFQALNKVDTSTVVQLQGAIKFNG 319 LP+LPY Y ALEP E M +HH KHH Y+TN N K+VE+L LN+V + ++ A++ NG Sbjct: 6 LPNLPYAYDALEPHFDKETMNIHHTKHHNTYITNLNAALEGHAELADKSVEELVANLNEVPEA----IRTAVRNNG 77
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_XANCP (Superoxide dismutase [Mn] OS=Xanthomonas campestris pv. campestris GN=sodA PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.763e-36 Identity = 56/121 (46.28%), Postives = 77/121 (63.64%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNW 684 GH NHS+FW ++P GGGEP + AID G E + + + GSGW WL + T K++VVE+TANQD + + T P+LG+DVWEHAYYL+Y+N +PDY+ +NV+NW Sbjct: 77 GHANHSLFWTVMSP--NGGGEPK-GEVAKAIDKDIGGFEKFKEAFTKAALSRFGSGWAWLSV-TPDKKVVVESTANQDSPLFEGNT--PILGLDVWEHAYYLKYQNRRPDYIGAFYNVVNW 191 HSP 2 Score: 60.8474 bits (146), Expect = 4.763e-36 Identity = 32/72 (44.44%), Postives = 40/72 (55.56%), Query Frame = 2 Query: 122 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVD------TSTVVQLQGAIKFNG 319 TLP LPY Y ALEP I + M++HH KHHQ Y+ N N A+E A V+ S LQG ++ NG Sbjct: 4 TLPQLPYAYDALEPNIDAQTMEIHHTKHHQTYINNVNAALEGTEYADLPVEELVSKLKSLPENLQGPVRNNG 75
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_XANC8 (Superoxide dismutase [Mn] OS=Xanthomonas campestris pv. campestris (strain 8004) GN=sodA PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.763e-36 Identity = 56/121 (46.28%), Postives = 77/121 (63.64%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNW 684 GH NHS+FW ++P GGGEP + AID G E + + + GSGW WL + T K++VVE+TANQD + + T P+LG+DVWEHAYYL+Y+N +PDY+ +NV+NW Sbjct: 77 GHANHSLFWTVMSP--NGGGEPK-GEVAKAIDKDIGGFEKFKEAFTKAALSRFGSGWAWLSV-TPDKKVVVESTANQDSPLFEGNT--PILGLDVWEHAYYLKYQNRRPDYIGAFYNVVNW 191 HSP 2 Score: 60.8474 bits (146), Expect = 4.763e-36 Identity = 32/72 (44.44%), Postives = 40/72 (55.56%), Query Frame = 2 Query: 122 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVD------TSTVVQLQGAIKFNG 319 TLP LPY Y ALEP I + M++HH KHHQ Y+ N N A+E A V+ S LQG ++ NG Sbjct: 4 TLPQLPYAYDALEPNIDAQTMEIHHTKHHQTYINNVNAALEGTEYADLPVEELVSKLKSLPENLQGPVRNNG 75
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_STRR6 (Superoxide dismutase [Mn] OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=sodA PE=3 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 6.206e-36 Identity = 54/128 (42.19%), Postives = 79/128 (61.72%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 705 GH+NH++FW+ + P P + L AID FGS E +A GSGW WL ++ E K L V +TANQD +++ P+LG+DVWEHAYY++Y+NV+PDY+K ++V+NW ++Y Sbjct: 77 GHLNHALFWELMTPEKTA----PSAELAAAIDATFGSFEEFQAAFTAAATTRFGSGWAWLVVNKEGK-LEVTSTANQDTPISEGKK--PILGLDVWEHAYYVKYRNVRPDYIKAFFSVINWNKVDELY 197 HSP 2 Score: 60.8474 bits (146), Expect = 6.206e-36 Identity = 26/43 (60.47%), Postives = 30/43 (69.77%), Query Frame = 2 Query: 119 VTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQ 247 + LP+LPY Y ALEP I E M LHH KHHQ YV N N A+E+ Sbjct: 3 IILPELPYAYDALEPYIDAETMHLHHDKHHQTYVNNANAALEK 45 The following BLAST results are available for this feature:
BLAST of CN185706 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 221
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185706 ID=CN185706; Name=CN185706; organism=Citrus sinensis; type=EST; length=712bpback to top |