CN185706
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_PASMU (Superoxide dismutase [Mn] OS=Pasteurella multocida GN=sodA PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 8.718e-35 Identity = 60/134 (44.78%), Postives = 83/134 (61.94%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQD-PLVTKAPTLV---PLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 711 GH+NHS+FWK+L G +L AI FGS+EA + A GSGW WL L E +L V +TANQD P++ KA PLLG+DVWEHAYYL+++N +PDY+K W+V+NW + ++ ++K Sbjct: 78 GHLNHSLFWKSLKK-----GTTLQGALKDAIVRDFGSVEAFQAEFEKAAATRFGSGWAWLVLQ-ENGKLAVVSTANQDSPVMGKAIAGCEGYPLLGLDVWEHAYYLKFQNRRPDYIKEFWHVVNWDFVAERFEK 205 HSP 2 Score: 56.9954 bits (136), Expect = 8.718e-35 Identity = 25/43 (58.14%), Postives = 29/43 (67.44%), Query Frame = 2 Query: 122 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQL 250 TLP+L Y Y ALEP M++HH KHHQAYV N N A+E L Sbjct: 4 TLPELGYAYDALEPHFDAMTMEIHHSKHHQAYVNNANAALENL 46
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_BACST (Superoxide dismutase [Mn] OS=Bacillus stearothermophilus GN=sodA PE=1 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 8.726e-35 Identity = 57/130 (43.85%), Postives = 77/130 (59.23%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 711 GH NHS+FW L+P GGGEP L AI+ FGS A + S A GSGW WL ++ L + +T NQD + + T P+LG+DVWEHAYYL+Y+N +P+Y+ WNV+NW + Y + Sbjct: 78 GHANHSLFWTILSP--NGGGEPT-GELADAINKKFGSFTAFKDEFSKAAAGRFGSGWAWLVVNNG--ELEITSTPNQDSPIMEGKT--PILGLDVWEHAYYLKYQNRRPEYIAAFWNVVNWDEVAKRYSE 200 HSP 2 Score: 56.9954 bits (136), Expect = 8.726e-35 Identity = 25/40 (62.50%), Postives = 27/40 (67.50%), Query Frame = 2 Query: 125 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE 244 LP LPY Y ALEP I E M +HH KHH YVTN N A+E Sbjct: 5 LPALPYPYDALEPHIDKETMNIHHTKHHNTYVTNLNAALE 44
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_BACCA (Superoxide dismutase [Mn] OS=Bacillus caldotenax GN=sodA PE=3 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 8.726e-35 Identity = 56/130 (43.08%), Postives = 77/130 (59.23%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 711 GH NHS+FW L+P GGGEP L AI+ FGS A + S A GSGW WL ++ L + +T NQD + + T P+LG+DVWEHAYYL+Y+N +P+Y+ WN++NW + Y + Sbjct: 78 GHANHSLFWTILSP--NGGGEPT-GELAEAINKKFGSFTAFKDEFSKAAAGRFGSGWAWLVVNNG--ELEITSTPNQDSPIMEGKT--PILGLDVWEHAYYLKYQNRRPEYIAAFWNIVNWDEVAKRYSE 200 HSP 2 Score: 56.9954 bits (136), Expect = 8.726e-35 Identity = 25/40 (62.50%), Postives = 27/40 (67.50%), Query Frame = 2 Query: 125 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE 244 LP LPY Y ALEP I E M +HH KHH YVTN N A+E Sbjct: 5 LPALPYPYDALEPHIDKETMNIHHTKHHNTYVTNLNAALE 44
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_STACA (Superoxide dismutase [Mn/Fe] OS=Staphylococcus carnosus GN=sodA PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.481e-34 Identity = 54/129 (41.86%), Postives = 78/129 (60.47%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 708 GH+NHS+FW+ L P E G I +GSL+ + + + A GSGW WL +D + K L + +T NQD +T+ T P+LG+DVWEHAYYL+Y+N +PDY+ WNV+NW ++Y+ Sbjct: 77 GHLNHSLFWQLLTPNSEEKGTVIDK-----IKEEWGSLDKFKDEFAKKAAGQFGSGWAWLVVDKDGK-LEIVSTPNQDNPITEGKT--PILGLDVWEHAYYLKYQNKRPDYIDAFWNVVNWNKVDELYE 197 HSP 2 Score: 57.3806 bits (137), Expect = 1.481e-34 Identity = 23/40 (57.50%), Postives = 29/40 (72.50%), Query Frame = 2 Query: 125 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE 244 LP+LPY++ ALEP I E M++HH KHH YVT N A+E Sbjct: 5 LPNLPYEFDALEPYIDKETMEIHHDKHHNTYVTKLNAAIE 44
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_LISMO (Superoxide dismutase [Mn] OS=Listeria monocytogenes GN=sodA PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.929e-34 Identity = 54/125 (43.20%), Postives = 82/125 (65.60%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYAS 696 GH NH++FW L+P GG P +L AI++ FG+ + +K +A AA GSGW WL ++ +L + +TANQD ++ T P+LG+DVWEHAYYL+++N +P+Y++ WNV+NW A+ Sbjct: 78 GHANHTLFWSILSP---NGGGAPTGNLKAAIESEFGTFDEFKEKFNAAAAARFGSGWAWLVVNDG--KLEIVSTANQDSPLSDGKT--PVLGLDVWEHAYYLKFQNRRPEYIETFWNVINWDEAN 195 HSP 2 Score: 53.1434 bits (126), Expect = 1.929e-34 Identity = 23/42 (54.76%), Postives = 27/42 (64.29%), Query Frame = 2 Query: 116 TVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAV 241 T LP LPY Y ALEP E M++H+ KHH YVT N+AV Sbjct: 2 TYELPKLPYTYDALEPNFDKETMEIHYTKHHNTYVTKLNEAV 43
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_STRP8 (Superoxide dismutase [Mn] OS=Streptococcus pyogenes serotype M18 GN=sodA PE=3 SV=3) HSP 1 Score: 109.768 bits (273), Expect = 1.929e-34 Identity = 52/129 (40.31%), Postives = 82/129 (63.57%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 708 GH+NH++FW+ L+P + + AID FGS +A ++ +A GSGW WL ++ E +L + +TANQD +++ P+L +DVWEHAYYL Y+NV+P+Y+K + ++NWK S++YQ Sbjct: 77 GHLNHALFWELLSPEKQD----VTPDVAQAIDDAFGSFDAFKEQFTAAATGRFGSGWAWLVVNKE-GQLEITSTANQDTPISEGKK--PILALDVWEHAYYLNYRNVRPNYIKAFFEIINWKKVSELYQ 198 HSP 2 Score: 57.3806 bits (137), Expect = 1.929e-34 Identity = 24/43 (55.81%), Postives = 28/43 (65.12%), Query Frame = 2 Query: 119 VTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQ 247 + LP+LPY Y ALEP E M LHH KHH YV N N A+E+ Sbjct: 3 IILPELPYAYDALEPQFDAETMSLHHDKHHATYVANTNAALEK 45
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM1_BACCR (Superoxide dismutase [Mn] 1 OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=sodA1 PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.508e-34 Identity = 58/130 (44.62%), Postives = 80/130 (61.54%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 711 GH NH+ FW L+P GGG+P L AI+ FGS +A ++ + GA GSGW WL ++ L V +T NQD +T+ T P++G+DVWEHAYYL Y+N +PDY+ WNV++W A YQ+ Sbjct: 94 GHANHTFFWTILSP--NGGGQPV-GELATAIEAKFGSFDAFKEEFAKAGATRFGSGWAWLVVNNG--ELEVTSTPNQDSPLTEGKT--PVIGLDVWEHAYYLNYQNRRPDYIGAFWNVVDWNAAEKRYQE 216 HSP 2 Score: 51.2174 bits (121), Expect = 2.508e-34 Identity = 28/72 (38.89%), Postives = 38/72 (52.78%), Query Frame = 2 Query: 137 PYDYSALEPAISGEIMQLHHQKHHQAYVTNYN-----------KAVEQLFQALNKVDTSTVVQLQGAIKFNG 319 PY Y ALEP E M +HH KHH Y+TN N K+VE+L LN+V + ++ A++ NG Sbjct: 25 PYAYDALEPHFDKETMNIHHTKHHNTYITNLNAALEGHAELADKSVEELVANLNEVPEA----IRTAVRNNG 92
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_LISIN (Superoxide dismutase [Mn] OS=Listeria innocua GN=sodA PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.513e-34 Identity = 54/125 (43.20%), Postives = 80/125 (64.00%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYAS 696 GH NH++FW L+P GG P L AI++ FG+ + +K +A AA GSGW WL ++ +L + +TANQD ++ T P+LG+DVWEHAYYL+++N +P+Y+ WNV+NW A+ Sbjct: 78 GHANHTLFWSILSP---NGGGAPTGDLKSAIESEFGTFDDFKEKFNAAAAARFGSGWAWLVVNNG--KLEIVSTANQDSPLSDGKT--PVLGLDVWEHAYYLKFQNRRPEYIDTFWNVVNWDEAN 195 HSP 2 Score: 53.9138 bits (128), Expect = 2.513e-34 Identity = 24/42 (57.14%), Postives = 27/42 (64.29%), Query Frame = 2 Query: 116 TVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAV 241 T LP LPY Y ALEP E M+LH+ KHH YVT N+AV Sbjct: 2 TYELPKLPYTYDALEPNFDKETMELHYTKHHNTYVTKLNEAV 43
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_STRP1 (Superoxide dismutase [Mn] OS=Streptococcus pyogenes serotype M1 GN=sodA PE=3 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 2.513e-34 Identity = 52/129 (40.31%), Postives = 82/129 (63.57%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 708 GH+NH++FW+ L+P + + AID FGS +A ++ +A GSGW WL ++ E +L + +TANQD +++ P+L +DVWEHAYYL Y+NV+P+Y+K + ++NWK S++YQ Sbjct: 77 GHLNHALFWELLSPEKQD----VTPDVAQAIDDAFGSFDAFKEQFTAAATGRFGSGWAWLVVNKE-GQLEITSTANQDTPISEGKK--PILALDVWEHAYYLNYRNVRPNYIKAFFEIVNWKKVSELYQ 198 HSP 2 Score: 56.9954 bits (136), Expect = 2.513e-34 Identity = 24/43 (55.81%), Postives = 28/43 (65.12%), Query Frame = 2 Query: 119 VTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQ 247 + LP+LPY Y ALEP E M LHH KHH YV N N A+E+ Sbjct: 3 IILPELPYAYDALEPQFDAETMTLHHDKHHATYVANTNAALEK 45
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_STRP6 (Superoxide dismutase [Mn] OS=Streptococcus pyogenes serotype M6 GN=sodA PE=3 SV=3) HSP 1 Score: 109.383 bits (272), Expect = 3.273e-34 Identity = 52/129 (40.31%), Postives = 82/129 (63.57%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 708 GH+NH++FW+ L+P + + AID FGS +A ++ +A GSGW WL ++ E +L + +TANQD +++ P+L +DVWEHAYYL Y+NV+P+Y+K + ++NWK S++YQ Sbjct: 77 GHLNHALFWELLSPEKQD----ITPDVAQAIDDAFGSFDAFKEQFTAAATGRFGSGWAWLVVNKE-GQLEITSTANQDTPISEGKK--PILALDVWEHAYYLNYRNVRPNYIKAFFEIINWKKVSELYQ 198 HSP 2 Score: 56.9954 bits (136), Expect = 3.273e-34 Identity = 24/43 (55.81%), Postives = 28/43 (65.12%), Query Frame = 2 Query: 119 VTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQ 247 + LP+LPY Y ALEP E M LHH KHH YV N N A+E+ Sbjct: 3 IILPELPYAYDALEPQFDAETMTLHHDKHHATYVANANAALEK 45 The following BLAST results are available for this feature:
BLAST of CN185706 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 221
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185706 ID=CN185706; Name=CN185706; organism=Citrus sinensis; type=EST; length=712bpback to top |