CN185705
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM2_MAIZE (Superoxide dismutase [Mn] 3.2, mitochondrial OS=Zea mays GN=SODA.1 PE=2 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 1.142e-57 Identity = 107/160 (66.88%), Postives = 123/160 (76.88%), Query Frame = -2 Query: 318 NKAVEQLFSSFEQSRHFHRRPVAGRYQVQRRGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 797 NKA+EQL + + + G + GH NHSIFW+NL P+ EGG EPPH LGWAID FGS EAL+++M+AEGAALQGSGWVWL LD E K+L VETTANQDPLVTK +LVPLLGIDVWEHAYYLQYKNV+PDYL NIW VMNWKYA +VY+ Sbjct: 70 NKALEQLDAVVVKGDASAVVQLQGAIKFNGGGHFNHSIFWENLKPISEGG-EPPHGKLGWAIDEDFGSFEALVKRMNAEGAALQGSGWVWLALDKEPKKLSVETTANQDPLVTKGASLVPLLGIDVWEHAYYLQYKNVRPDYLNNIWKVMNWKYAGEVYE 228
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_DICDI (Superoxide dismutase [Mn], mitochondrial OS=Dictyostelium discoideum GN=sod2 PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 9.263e-41 Identity = 77/128 (60.16%), Postives = 92/128 (71.88%), Query Frame = -2 Query: 321 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 704 GHVNHSIFW NLAP ++ GG P L AI+ +GS+E LI+KMSAE A+QGSGW WLG D RLV++T NQDPL VPLLGIDVWEHAYYL YKNV+ DY+KNIW ++NWK ++ Y Sbjct: 96 GHVNHSIFWTNLAPKNQDGGVAPSGPLADAINKQYGSIEKLIEKMSAETTAIQGSGWGWLGYDKANDRLVIQTQQNQDPLSVSG--YVPLLGIDVWEHAYYLDYKNVRADYVKNIWQIVNWKNVAERY 221 HSP 2 Score: 23.483 bits (49), Expect = 9.263e-41 Identity = 9/16 (56.25%), Postives = 12/16 (75.00%), Query Frame = -3 Query: 707 DTSTVVQLQGAIKFNG 754 D + ++ LQ AIKFNG Sbjct: 79 DVAQMIALQSAIKFNG 94
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_RAT (Superoxide dismutase [Mn], mitochondrial OS=Rattus norvegicus GN=Sod2 PE=1 SV=2) HSP 1 Score: 148.673 bits (374), Expect = 3.573e-35 Identity = 74/128 (57.81%), Postives = 88/128 (68.75%), Query Frame = -2 Query: 321 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 704 GH+NHSIFW NL+P +GGGEP L AI FGS E +K++A +QGSGW WLG + E RL + +NQDPL L+PLLGIDVWEHAYYLQYKNV+PDYLK IWNV+NW+ S Y Sbjct: 94 GHINHSIFWTNLSP--KGGGEPKGELLE-AIKRDFGSFEKFKEKLTAVSVGVQGSGWGWLGFNKEQGRLQIAACSNQDPL-QGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVINWENVSQRY 217
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_MOUSE (Superoxide dismutase [Mn], mitochondrial OS=Mus musculus GN=Sod2 PE=1 SV=3) HSP 1 Score: 147.132 bits (370), Expect = 1.040e-34 Identity = 72/128 (56.25%), Postives = 89/128 (69.53%), Query Frame = -2 Query: 321 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 704 GH+NH+IFW NL+P +GGGEP L AI FGS E +K++A +QGSGW WLG + E RL + +NQDPL L+PLLGIDVWEHAYYLQYKNV+PDYLK IWNV+NW+ ++ Y Sbjct: 94 GHINHTIFWTNLSP--KGGGEPKGELLE-AIKRDFGSFEKFKEKLTAVSVGVQGSGWGWLGFNKEQGRLQIAACSNQDPL-QGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVINWENVTERY 217
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_HORSE (Superoxide dismutase [Mn], mitochondrial OS=Equus caballus GN=SOD2 PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.773e-34 Identity = 72/128 (56.25%), Postives = 88/128 (68.75%), Query Frame = -2 Query: 321 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 704 GH+NH+IFW NL+P GGGEP L AI FGS + +K++A A +QGSGW WLG + + RL + NQDPL L+PLLGIDVWEHAYYLQYKNV+PDYLK IWNV+NW+ S+ Y Sbjct: 94 GHINHTIFWTNLSP--NGGGEPKGKLLD-AIKRDFGSFDKFKEKLTAVSAGVQGSGWGWLGFNKDQGRLQIVACPNQDPL-QGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVINWENVSERY 217
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_MACMU (Superoxide dismutase [Mn], mitochondrial OS=Macaca mulatta GN=SOD2 PE=2 SV=2) HSP 1 Score: 145.976 bits (367), Expect = 2.316e-34 Identity = 72/128 (56.25%), Postives = 87/128 (67.97%), Query Frame = -2 Query: 321 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 704 GH+NHSIFW NL+P GGGEP L AI FGS E +K++A +QGSGW WLG + E +L + NQDPL L+PLLGIDVWEHAYYLQYKNV+PDYLK IWNV+NW+ ++ Y Sbjct: 70 GHINHSIFWTNLSP--NGGGEPKGELLE-AIKRDFGSFEKFKEKLTAASVGVQGSGWGWLGFNKERGQLQIAACPNQDPL-QGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVINWENVTERY 193
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_MACFU (Superoxide dismutase [Mn], mitochondrial OS=Macaca fuscata fuscata GN=SOD2 PE=2 SV=2) HSP 1 Score: 145.976 bits (367), Expect = 2.316e-34 Identity = 72/128 (56.25%), Postives = 87/128 (67.97%), Query Frame = -2 Query: 321 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 704 GH+NHSIFW NL+P GGGEP L AI FGS E +K++A +QGSGW WLG + E +L + NQDPL L+PLLGIDVWEHAYYLQYKNV+PDYLK IWNV+NW+ ++ Y Sbjct: 70 GHINHSIFWTNLSP--NGGGEPKGELLE-AIKRDFGSFEKFKEKLTAASVGVQGSGWGWLGFNKERGQLQIAACPNQDPL-QGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVINWENVTERY 193
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_MACFA (Superoxide dismutase [Mn], mitochondrial OS=Macaca fascicularis GN=SOD2 PE=2 SV=3) HSP 1 Score: 145.976 bits (367), Expect = 2.316e-34 Identity = 72/128 (56.25%), Postives = 87/128 (67.97%), Query Frame = -2 Query: 321 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 704 GH+NHSIFW NL+P GGGEP L AI FGS E +K++A +QGSGW WLG + E +L + NQDPL L+PLLGIDVWEHAYYLQYKNV+PDYLK IWNV+NW+ ++ Y Sbjct: 94 GHINHSIFWTNLSP--NGGGEPKGELLE-AIKRDFGSFEKFKEKLTAASVGVQGSGWGWLGFNKERGQLQIAACPNQDPL-QGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVINWENVTERY 217
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_MACNE (Superoxide dismutase [Mn], mitochondrial OS=Macaca nemestrina GN=SOD2 PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 3.025e-34 Identity = 72/128 (56.25%), Postives = 87/128 (67.97%), Query Frame = -2 Query: 321 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 704 GH+NHSIFW NL+P GGGEP L AI FGS E +K++A +QGSGW WLG + E +L + NQDPL L+PLLGIDVWEHAYYLQYKNV+PDYLK IWNV+NW+ ++ Y Sbjct: 94 GHINHSIFWTNLSP--NGGGEPKGELLE-AIKRDFGSFEKYKEKLTAASVGVQGSGWGWLGFNKERGQLQIAACLNQDPL-QGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVINWENVTERY 217
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_PONPY (Superoxide dismutase [Mn], mitochondrial OS=Pongo pygmaeus GN=SOD2 PE=2 SV=3) HSP 1 Score: 144.436 bits (363), Expect = 6.739e-34 Identity = 71/128 (55.47%), Postives = 86/128 (67.19%), Query Frame = -2 Query: 321 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 704 GH+NHSIFW NL+P GGGEP L AI FGS + +K++A +QGSGW WLG + E L + NQDPL L+PLLGIDVWEHAYYLQYKNV+PDYLK IWNV+NW+ ++ Y Sbjct: 94 GHINHSIFWTNLSP--NGGGEPKGELLE-AIKRDFGSFDKFKEKLTAASVGVQGSGWGWLGFNKERGHLQIAACPNQDPL-QGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVINWENVTERY 217 The following BLAST results are available for this feature:
BLAST of CN185705 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 213
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185705 ID=CN185705; Name=CN185705; organism=Citrus sinensis; type=EST; length=798bpback to top |