CN185705
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_STRPY (Superoxide dismutase [Mn] OS=Streptococcus pyogenes GN=sodA PE=1 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 5.352e-23 Identity = 52/129 (40.31%), Postives = 81/129 (62.79%), Query Frame = -2 Query: 318 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 704 GH+NH++FW+ L+P + + AID FGS +A ++ +A GSGW WL ++ E +L + +TANQD +++ P+L +DVWEHAYYL Y+NV+P+Y+K + ++NWK S +YQ Sbjct: 77 GHLNHALFWELLSPEKQD----VTPDVAQAIDDAFGSFDAFKEQFTAAATGRFGSGWAWLVVNKE-GQLEITSTANQDTPISEGKK--PILALDVWEHAYYLNYRNVRPNYIKAFFEIINWKKVSALYQ 198
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_DEIRA (Superoxide dismutase [Mn] OS=Deinococcus radiodurans GN=sodA PE=1 SV=3) HSP 1 Score: 107.457 bits (267), Expect = 9.129e-23 Identity = 60/133 (45.11%), Postives = 77/133 (57.89%), Query Frame = -2 Query: 321 GHVNHSIFWKNLAPVH-EGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQD-PLVTKAPTLV---PLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 704 GH NHS+FW+ + + G P L AI++ FGS +A QK GSGW WL + +L V +TANQD PL+ +A V P+LG+DVWEHAYYL Y+N +PDYL WNV+NW S Y Sbjct: 77 GHANHSMFWQIMGQGQGQNGANQPSGELLDAINSAFGSFDAFKQKFEDAAKTRFGSGWAWLVVKDG--KLDVVSTANQDNPLMGEAIAGVSGTPILGVDVWEHAYYLNYQNRRPDYLAAFWNVVNWDEVSKRY 207
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_PASHA (Superoxide dismutase [Mn] OS=Pasteurella haemolytica GN=sodA PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.192e-22 Identity = 59/135 (43.70%), Postives = 80/135 (59.26%), Query Frame = -2 Query: 312 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQD-PLVTKAPTLV---PLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQKE 704 GHVNH++FWK L G +L AI+ FGS+EA + GSGW WL L E +L V +TANQD PL+ K V P+L +DVWEHAYYL Y+N +PD++K WNV+NW A+ ++++ Sbjct: 78 GHVNHTLFWKGLKT-----GTTLQGALKEAIERDFGSVEAFQSEFEKAATTRVGSGWAWLVL--EEGKLAVVSTANQDNPLMGKEVAGVSGYPILVLDVWEHAYYLNYQNRRPDFIKAFWNVVNWDEAARRFEEK 205
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_SHIFL (Superoxide dismutase [Mn] OS=Shigella flexneri GN=sodA PE=3 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 1.557e-22 Identity = 57/129 (44.19%), Postives = 78/129 (60.47%), Query Frame = -2 Query: 330 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQD-PLVTKA---PTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYAS 704 GH NHS+FWK L G L AI+ FGS++ + A+ GSGW WL L + +L V +TANQD PL+ +A + P+LG+DVWEHAYYL+++N +PDY+K WNV+NW A+ Sbjct: 78 GHANHSLFWKGLKK-----GTTLQGDLKAAIERDFGSVDNFKAEFEKAAASRFGSGWAWLVLKGD--KLAVVSTANQDSPLMGEAISGASGFPILGLDVWEHAYYLKFQNRRPDYIKEFWNVVNWDEAA 199
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_PSEPU (Superoxide dismutase [Mn] OS=Pseudomonas putida GN=sodA PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.557e-22 Identity = 53/121 (43.80%), Postives = 75/121 (61.98%), Query Frame = -2 Query: 342 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNW 704 GH NHS+FW ++P +GGGEP H L AI + G +A + + GSGW WL + T K LVVE++ NQD + T P+ G+DVWEHAYYL+Y+N +P+Y+ +NV++W Sbjct: 77 GHANHSLFWTVMSP--QGGGEP-HGQLAQAIASQLGGFDAFKEAFTKAALTRFGSGWAWLSV-TPQKTLVVESSGNQDSPLMFGNT--PIFGLDVWEHAYYLKYQNRRPEYIGAFYNVIDW 191
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_ECO57 (Superoxide dismutase [Mn] OS=Escherichia coli O157:H7 GN=sodA PE=3 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 1.557e-22 Identity = 57/129 (44.19%), Postives = 78/129 (60.47%), Query Frame = -2 Query: 330 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQD-PLVTKA---PTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYAS 704 GH NHS+FWK L G L AI+ FGS++ + A+ GSGW WL L + +L V +TANQD PL+ +A + P+LG+DVWEHAYYL+++N +PDY+K WNV+NW A+ Sbjct: 78 GHANHSLFWKGLKK-----GTTLQGDLKAAIERDFGSVDNFKAEFEKAAASRFGSGWAWLVLKGD--KLAVVSTANQDSPLMGEAISGASGFPILGLDVWEHAYYLKFQNRRPDYIKEFWNVVNWDEAA 199
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_SALTY (Superoxide dismutase [Mn] OS=Salmonella typhimurium GN=sodA PE=3 SV=3) HSP 1 Score: 106.301 bits (264), Expect = 2.034e-22 Identity = 57/129 (44.19%), Postives = 77/129 (59.69%), Query Frame = -2 Query: 330 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQD-PLVTKA---PTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYAS 704 GH NHS+FWK L G L AI+ FGS++ + A GSGW WL L + +L V +TANQD PL+ +A + P+LG+DVWEHAYYL+++N +PDY+K WNV+NW A+ Sbjct: 78 GHANHSLFWKGLKK-----GTTLQGDLKAAIERDFGSVDNFKAEFEKAAATRFGSGWAWLVLKGD--KLAVVSTANQDSPLMGEAISGASGFPILGLDVWEHAYYLKFQNRRPDYIKEFWNVVNWDEAA 199
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_SALTI (Superoxide dismutase [Mn] OS=Salmonella typhi GN=sodA PE=3 SV=3) HSP 1 Score: 106.301 bits (264), Expect = 2.034e-22 Identity = 57/129 (44.19%), Postives = 77/129 (59.69%), Query Frame = -2 Query: 330 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQD-PLVTKA---PTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYAS 704 GH NHS+FWK L G L AI+ FGS++ + A GSGW WL L + +L V +TANQD PL+ +A + P+LG+DVWEHAYYL+++N +PDY+K WNV+NW A+ Sbjct: 78 GHANHSLFWKGLKK-----GTTLQGDLKAAIERDFGSVDNFKAEFEKAAATRFGSGWAWLVLKGD--KLAVVSTANQDSPLMGEAISGASGFPILGLDVWEHAYYLKFQNRRPDYIKEFWNVVNWDEAA 199
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODB_ASPNG (Superoxide dismutase [Mn], mitochondrial OS=Aspergillus niger GN=sodB PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.034e-22 Identity = 55/130 (42.31%), Postives = 74/130 (56.92%), Query Frame = -2 Query: 321 GHVNHSIFWKNLAPVHEGGGEPPHS--SLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 704 GH+NHS+FWKNLA S SL AI+ +GS++ A +QGSGW WL + L + TT +QDP+ +P+ G+D+WEHAYYLQY N K Y++NIW V+NW+ A Y Sbjct: 73 GHINHSLFWKNLARYDSPATNLERSAPSLKDAIEKQWGSVKNFTDAFEAVLLGIQGSGWGWLVSSGKTGFLEIVTTKDQDPVTGP----IPVFGVDMWEHAYYLQYLNNKASYVQNIWKVINWEEAEHRY 198
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_PSEAE (Superoxide dismutase [Mn] OS=Pseudomonas aeruginosa GN=sodA PE=3 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 2.656e-22 Identity = 54/128 (42.19%), Postives = 76/128 (59.38%), Query Frame = -2 Query: 321 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 704 GH NHS+FW ++P +GGG P LG AID G EA + GSGW WL + T L+VE++ NQD + T P+LG+DVWEHAYYL+Y+N +P+Y+ +NV++W+ + Y Sbjct: 77 GHANHSLFWTVMSP--QGGGRPD-GDLGRAIDEQLGGFEAFKDAFTKAALTRFGSGWAWLSV-TPQGSLLVESSGNQDSPLMNGNT--PILGLDVWEHAYYLKYQNRRPEYIGAFYNVIDWREVARRY 198 The following BLAST results are available for this feature:
BLAST of CN185705 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 213
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185705 ID=CN185705; Name=CN185705; organism=Citrus sinensis; type=EST; length=798bpback to top |