CN185705
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM2_STAA3 (Superoxide dismutase [Mn/Fe] 2 OS=Staphylococcus aureus (strain USA300) GN=sodM PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.917e-22 Identity = 56/142 (39.44%), Postives = 81/142 (57.04%), Query Frame = -2 Query: 318 PVAGRYQVQRRG--HVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 737 P A R V+ G H NHS+FW+ L+P E G I +G+L+ + + + L GSGW WL ++ +L + TT NQD +T+ T P+L DVWEHAYYL+Y+N +PDY+ WN++NWK ++YQ Sbjct: 64 PEAMRMSVRNNGGGHFNHSLFWEILSPNSEEKGGVIDD-----IKAQWGTLDEFKNEFANKATTLFGSGWTWLVVNDG--KLEIVTTPNQDNPLTEGKT--PILLFDVWEHAYYLKYQNKRPDYMTAFWNIVNWKKVDELYQ 196
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODF_AERPE (Superoxide dismutase [Mn/Fe] OS=Aeropyrum pernix GN=sod PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.917e-22 Identity = 57/152 (37.50%), Postives = 79/152 (51.97%), Query Frame = -2 Query: 342 NKAVEQLFSSFEQSRHFHRRPVAGRYQVQRRGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNW 797 N A+E++ + R V + GH+ H+IFW N+AP +GGG P + I+ FG E SA ++G GW L D + L + + L+T LVP+L IDVWEHAYYLQYKN + Y++N WNV+NW Sbjct: 44 NAALEKIEKHLKGEIQIDVRAVMRDFSFNYAGHIMHTIFWPNMAPPGKGGGTPG-GRVADLIEKQFGGFEKFKALFSAAAKTVEGVGWGVLAFDPLTEELRILQVEKHNVLMTAG--LVPILVIDVWEHAYYLQYKNDRGSYVENWWNVVNW 192
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM2_PLEBO (Superoxide dismutase [Mn] 2 OS=Plectonema boryanum GN=sodA2 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.009e-21 Identity = 56/140 (40.00%), Postives = 82/140 (58.57%), Query Frame = -2 Query: 339 HFHRRPVAGRYQVQRR--GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWK 752 H R P R V+ GHVNH++FW+ + G P ++ AI+ FGS +A Q+ + G GSGWVWL + ++ L + +T NQD + + T P++G DVWEHAYYL+Y+N +P+YL WNV+NW+ Sbjct: 60 HLDRVPEDVRTTVRNNAGGHVNHTMFWEIMGA---NGSGAPTGAISEAINNSFGSFDAFKQQFNDAGTKRFGSGWVWL-VRSQQGDLQILSTPNQDSPLIEGHT--PIMGNDVWEHAYYLKYQNRRPEYLNAWWNVLNWE 193
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_PETMA (Superoxide dismutase [Mn], mitochondrial (Fragment) OS=Petromyzon marinus PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.249e-21 Identity = 55/96 (57.29%), Postives = 63/96 (65.62%), Query Frame = -2 Query: 420 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPT-LVPLLGIDV 704 GH+NHSIFW NL+P GG P L AI+T FGS L +KMSA A+QGSGW WLG D E RL + ANQDPL +A T L+PLLGIDV Sbjct: 54 GHINHSIFWTNLSP---NGGGAPTGDLQKAIETDFGSFTKLQEKMSAVSVAVQGSGWGWLGYDKETGRLRIAACANQDPL--QATTGLIPLLGIDV 144 HSP 2 Score: 24.6386 bits (52), Expect = 2.249e-21 Identity = 11/22 (50.00%), Postives = 15/22 (68.18%), Query Frame = -3 Query: 707 QALNKVDTSTVVQLQGAIKFNG 772 +A+ K D + + LQ AIKFNG Sbjct: 31 EAVAKGDVTAEIALQPAIKFNG 52
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_STRAG (Superoxide dismutase [Mn/Fe] OS=Streptococcus agalactiae GN=sodA PE=3 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 2.937e-21 Identity = 51/129 (39.53%), Postives = 77/129 (59.69%), Query Frame = -2 Query: 318 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 704 GH+NH++FW+ ++P + L I+ FGS E +A GSGW WL ++ E K L V +TANQD + + P+LG+DVWEHAYYL Y+NV+P+Y+K + ++NW +++YQ Sbjct: 77 GHLNHALFWELMSPEETQISQ----ELSEDINATFGSFEDFKAAFTAAATGRFGSGWAWLVVNAEGK-LEVLSTANQDTPIMEGKK--PILGLDVWEHAYYLNYRNVRPNYIKAFFEIINWNKVNELYQ 198
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_STRA5 (Superoxide dismutase [Mn/Fe] OS=Streptococcus agalactiae serotype V GN=sodA PE=3 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 2.937e-21 Identity = 51/129 (39.53%), Postives = 77/129 (59.69%), Query Frame = -2 Query: 318 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 704 GH+NH++FW+ ++P + L I+ FGS E +A GSGW WL ++ E K L V +TANQD + + P+LG+DVWEHAYYL Y+NV+P+Y+K + ++NW +++YQ Sbjct: 77 GHLNHALFWELMSPEETQISQ----ELSEDINATFGSFEDFKAAFTAAATGRFGSGWAWLVVNAEGK-LEVLSTANQDTPIMEGKK--PILGLDVWEHAYYLNYRNVRPNYIKAFFEIINWNKVNELYQ 198
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_STRA3 (Superoxide dismutase [Mn/Fe] OS=Streptococcus agalactiae serotype III GN=sodA PE=3 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 2.937e-21 Identity = 51/129 (39.53%), Postives = 77/129 (59.69%), Query Frame = -2 Query: 318 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 704 GH+NH++FW+ ++P + L I+ FGS E +A GSGW WL ++ E K L V +TANQD + + P+LG+DVWEHAYYL Y+NV+P+Y+K + ++NW +++YQ Sbjct: 77 GHLNHALFWELMSPEETQISQ----ELSEDINATFGSFEDFKAAFTAAATGRFGSGWAWLVVNAEGK-LEVLSTANQDTPIMEGKK--PILGLDVWEHAYYLNYRNVRPNYIKAFFEIINWNKVNELYQ 198
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODF_PORGI (Superoxide dismutase [Mn/Fe] OS=Porphyromonas gingivalis GN=sodB PE=1 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 3.836e-21 Identity = 53/126 (42.06%), Postives = 71/126 (56.35%), Query Frame = -2 Query: 321 VNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 698 +NH++++ P G G P LG AID FGS E ++ + G L GSGWVWL D K L +E N V K L PLLG DVWEHAYYL Y+N + D+LK++W++++W Y Sbjct: 72 LNHNLYFTQFRP---GKGGAPKGKLGEAIDKQFGSFEKFKEEFNTAGTTLFGSGWVWLASDANGK-LSIEKEPNAGNPVRKG--LNPLLGFDVWEHAYYLTYQNRRADHLKDLWSIVDWDIVESRY 191
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_STRMU (Superoxide dismutase [Mn/Fe] OS=Streptococcus mutans GN=sodA PE=1 SV=3) HSP 1 Score: 101.679 bits (252), Expect = 5.009e-21 Identity = 52/128 (40.62%), Postives = 77/128 (60.16%), Query Frame = -2 Query: 321 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 704 GH+NH++FW+ L+P + + AI+ FGS + +A GSGW WL +D E K L V +TANQD +++ L P+L +DVWEHAYYL Y+NV+P+Y+K + V+NW + +Y Sbjct: 77 GHLNHALFWELLSPEKT----KVTAEVAAAINEAFGSFDDFKAAFTAAATTRFGSGWAWLVVDKEGK-LEVTSTANQDTPISQG--LKPILALDVWEHAYYLNYRNVRPNYIKAFFEVINWNTVARLY 197
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_BUCAI (Superoxide dismutase [Mn] OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=sodA PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.116e-20 Identity = 54/134 (40.30%), Postives = 79/134 (58.96%), Query Frame = -2 Query: 315 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQD-PLVTKAPTLV---PLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 704 GH+NHS FWK+L G + L I+ FG+++ +K + GSGWVWL +V +T NQD PL+ K + P++G+D+WEHAYYL+Y+N + DY+K+ WNV+NW+ AS+ QK Sbjct: 77 GHINHSFFWKSLK-----SGTVLTNDLKIEIEKQFGTIDEFKEKFESVALNHFGSGWVWLVNQNGVLSIV--STVNQDSPLMGKLISNTYGYPIIGLDIWEHAYYLKYQNRRLDYIKSFWNVVNWEEASNRLQK 203 The following BLAST results are available for this feature:
BLAST of CN185705 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 213
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185705 ID=CN185705; Name=CN185705; organism=Citrus sinensis; type=EST; length=798bpback to top |