CN185705
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM2_BACAN (Superoxide dismutase [Mn] 2 OS=Bacillus anthracis GN=sodA2 PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.116e-20 Identity = 57/159 (35.85%), Postives = 91/159 (57.23%), Query Frame = -2 Query: 321 NKAVEQLFSSFEQSRHFHRRPVAGRYQVQRRGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 797 NK++E+L + E + + + GH HS+FW+ ++P GGGEP + + ID +F + + L ++S + GSG+ WL LD E L V +T NQD + + +PLL IDVWEHAYYL+Y+N +P+++ N W+ +NW ++ Y Sbjct: 52 NKSLEELLCNLETLP----KEIVTAVRNNGGGHYCHSLFWEVMSP--RGGGEP-NGDVAKVIDYYFNTFDNLKDQLSKAAISRFGSGYGWLVLDGE--ELSVMSTPNQDTPLQEGK--IPLLVIDVWEHAYYLKYQNRRPEFVTNWWHTVNWDRVNEKY 199
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM2_BACCR (Superoxide dismutase [Mn] 2 OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=sodA2 PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.904e-20 Identity = 52/128 (40.62%), Postives = 79/128 (61.72%), Query Frame = -2 Query: 321 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 704 GH HS+FW+ ++P GGGEP + + ID +F + + L ++S + GSG+ WL LD E L V +T NQD + + +PLL IDVWEHAYYL+Y+N +P+++ N W+ +NW ++ Y Sbjct: 79 GHYCHSLFWEVMSP--RGGGEP-NGDVAKVIDYYFNTFDNLKDQLSKAAISRFGSGYGWLVLDGE--ELSVMSTPNQDTPLQEGK--IPLLVIDVWEHAYYLKYQNRRPEFVTNWWHTVNWDQVNEKY 199
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODF_METTH (Superoxide dismutase [Fe] OS=Methanobacterium thermoautotrophicum GN=sod PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.234e-19 Identity = 49/122 (40.16%), Postives = 66/122 (54.10%), Query Frame = -2 Query: 339 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWK 704 G+V H FW N+ P E GGEP L I+ FGS E ++ S + +GSGW L RL + + V P LL +DVWEHAYY+ Y+NV+PDY++ WN++NWK Sbjct: 77 GYVLHLFFWGNMGPADECGGEPS-GKLAEYIEKDFGSFERFRKEFSQAAISAEGSGWAVLTYCQRTDRLFIMQVEKHN--VNVIPHFRILLVLDVWEHAYYIDYRNVRPDYVEAFWNIVNWK 195
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODF_SULAC (Superoxide dismutase [Fe] OS=Sulfolobus acidocaldarius GN=sod PE=1 SV=3) HSP 1 Score: 96.6709 bits (239), Expect = 1.611e-19 Identity = 53/130 (40.77%), Postives = 70/130 (53.85%), Query Frame = -2 Query: 315 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 704 GH H+I+W N+AP +GGG+P +L I+ +GS + Q S +L GSGW L D E L + T N + L +L +D +EHAYYLQYKN + DYL WNV+NW A QK Sbjct: 81 GHKLHAIYWNNMAPAGKGGGKPG-GALADLINKQYGSFDRFKQVFSESANSLPGSGWTVLYYDNESGNLQIMTVENH--FMNHIAELPVILIVDEFEHAYYLQYKNKRGDYLNAWWNVVNWDDAEKRLQK 207
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_EPTST (Superoxide dismutase [Mn], mitochondrial (Fragment) OS=Eptatretus stoutii PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.105e-19 Identity = 51/95 (53.68%), Postives = 63/95 (66.32%), Query Frame = -2 Query: 420 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDV 704 GH+NHSIFW+NL+P GGG+P L AI+ FGS++ L +K+ A +QGSGW WLG + E KRL + T ANQDPL L PLLGIDV Sbjct: 54 GHINHSIFWRNLSP--SGGGQPCGDLLK-AIENDFGSVDKLREKLVAAAVGVQGSGWAWLGFNKESKRLQIATCANQDPL-QGTTGLFPLLGIDV 144
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODF_PSEHT (Superoxide dismutase [Fe] OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=sodB PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.105e-19 Identity = 44/122 (36.07%), Postives = 72/122 (59.02%), Query Frame = -2 Query: 330 NHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYAS 695 NH+ +W +L+P GG P ++ AI+ +GS +A + ++ + GS W WL + +V T+ PL T P+L +D+WEHAYY+ Y+NV+PDYLK W+++NW++A+ Sbjct: 72 NHTFYWNSLSP---NGGGAPTGAVADAINAKWGSFDAFKEALNDKAVNNFGSSWTWLVKLADGSLDIVNTSNAATPLTDDGVT--PILTVDLWEHAYYIDYRNVRPDYLKGFWSLVNWEFAN 188
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODF_PYRAE (Superoxide dismutase [Fe] OS=Pyrobaculum aerophilum GN=sod PE=1 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 2.749e-19 Identity = 54/152 (35.53%), Postives = 78/152 (51.32%), Query Frame = -2 Query: 342 NKAVEQLFSSFEQSRHFHRRPVAGRYQVQRRGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNW 797 N A+E+L + R V GH+ HSIFW N+AP +GGG+P + I+ FGS E ++ S ++G GW L + ++L++ + + A LL +DVWEHAYYLQYKN + Y+ N WNV+NW Sbjct: 44 NAALEKLEKFRKGEAQIDIRAVLRDLSFHLNGHILHSIFWPNMAPPGKGGGKPG-GKIADLINKFFGSFEKFKEEFSQAAKNVEGVGWAILVYEPLEEQLLILQIEKHN--LMHAADAQVLLALDVWEHAYYLQYKNDRGSYVDNWWNVVNW 192
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODF_LEGPH (Superoxide dismutase [Fe] OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=sodB PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.749e-19 Identity = 48/122 (39.34%), Postives = 69/122 (56.56%), Query Frame = -2 Query: 330 NHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYAS 695 NH+ +W +++P GGGEP L AI+ FGS A ++ S A GSGW WL D ++ T+ P+ L LL DVWEHAYY+ Y+N +PDY++ W+++NW +AS Sbjct: 73 NHTFYWHSMSP--NGGGEPK-GRLAEAINKSFGSFAAFKEQFSQTAATTFGSGWAWLVQDQSGALKIINTSNAGTPMTEG---LNALLTCDVWEHAYYIDYRNRRPDYIEAFWSLVNWDFAS 188
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODF_BORPE (Superoxide dismutase [Fe] OS=Bordetella pertussis GN=sodB PE=3 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 2.749e-19 Identity = 48/122 (39.34%), Postives = 70/122 (57.38%), Query Frame = -2 Query: 330 NHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYAS 695 NH+ +W +L+P GGGEP +L AI +GS++A + + A GSGW WL + +V T+ PL T L L DVWEHAYY+ Y+N +P YL+N W ++NW++A+ Sbjct: 73 NHTFYWNSLSP--NGGGEPS-GALADAIKAKWGSVDAFKEAFNKSAAGNFGSGWTWLVKKADGTLDIVNTSNAATPLTTADKAL---LTCDVWEHAYYIDYRNARPKYLENFWALVNWEFAA 188
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_BRAFL (Superoxide dismutase [Mn], mitochondrial (Fragment) OS=Branchiostoma floridae PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.689e-19 Identity = 58/126 (46.03%), Postives = 68/126 (53.97%), Query Frame = -2 Query: 420 NKAVEQLFSSFEQSRHFHRRPVAGRYQVQRRGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDV 797 N A EQL + + + + GH+NHSIFW NL P GGGEP L AI FGS EA +KM+A A+QGSGW WLGLD K+L + NQDPL L PLLGIDV Sbjct: 23 NAAEEQLAEAIHKQDVTKMIALQSAIKFNGGGHINHSIFWNNLCP--SGGGEPT-GPLAEAITRDFGSFEAFKEKMTAATVAVQGSGWGWLGLDPTSKKLRIVACPNQDPL-EGTTGLKPLLGIDV 144 The following BLAST results are available for this feature:
BLAST of CN185705 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 213
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185705 ID=CN185705; Name=CN185705; organism=Citrus sinensis; type=EST; length=798bpback to top |