CN185705
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODF_ACIAM (Superoxide dismutase [Fe] OS=Acidianus ambivalens GN=sod PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.782e-18 Identity = 52/148 (35.14%), Postives = 77/148 (52.03%), Query Frame = -2 Query: 315 AGRYQVQR---------RGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 731 +G+Y +Q GH HS++W+N+AP +GGG+P +G I+ +GS E + +L G+GW L + E L + T N L LL +D +EHAYYLQYKN + DY+ N WN++NW +A Q+ Sbjct: 63 SGQYDIQGLLRGLVFNINGHKLHSLYWQNMAPAGKGGGKPG-GVIGDLIEKQYGSFEKFKALFTEAANSLPGTGWTVLYYEVENGNLQIMTFENH--FQNHIAELPILLILDEFEHAYYLQYKNKRADYVNNWWNLVNWDFADKKLQQ 207
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODF_SYNE7 (Superoxide dismutase [Fe] OS=Synechococcus elongatus (strain PCC 7942) GN=sodB PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.969e-18 Identity = 51/126 (40.48%), Postives = 65/126 (51.59%), Query Frame = -2 Query: 321 NHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKN-IWNVMNWKYASDVY 695 NHS +W ++ P GG P +L I FGS E + + A GSGW WL LD L + T N D + T PLL IDVWEHAYYL Y+N +PDY+ + + NW +AS Y Sbjct: 78 NHSFYWNSIKP---NGGGAPTGALADKIAADFGSFENFVTEFKQAAATQFGSGWAWLVLDNG--TLKITKTGNADTPIAHGQT--PLLTIDVWEHAYYLDYQNRRPDYISTFVEKLANWDFASANY 196
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODF_PLAVI (Superoxide dismutase [Fe] OS=Plasmodium vivax GN=SODB PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.969e-18 Identity = 45/127 (35.43%), Postives = 73/127 (57.48%), Query Frame = -2 Query: 315 NHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 695 NH+ +W ++ P + GGEP H + I FGS ++ S GSGW WL L+ K ++++T +P+ K T +P+L D+WEHAYY+ Y+N + Y+K WN++NW +A++ +K Sbjct: 73 NHTFYWDSMGP--DCGGEP-HGEIKEKIQEDFGSFNNFKEQFSNILCGHFGSGWGWLALNNNNKLVILQTHDAGNPI--KDNTGIPILTCDIWEHAYYIDYRNDRASYVKAWWNLVNWNFANENLKK 194
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODF_PLAFX (Superoxide dismutase [Fe] OS=Plasmodium falciparum (isolate HB3) GN=SODB PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.969e-18 Identity = 45/127 (35.43%), Postives = 73/127 (57.48%), Query Frame = -2 Query: 315 NHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 695 NH+ +W ++ P + GGEP H + I FGS ++ S GSGW WL L+ K ++++T +P+ K T +P+L D+WEHAYY+ Y+N + Y+K WN++NW +A++ +K Sbjct: 73 NHTFYWDSMGP--DCGGEP-HGEIKEKIQEDFGSFNNFKEQFSNILCGHFGSGWGWLALNNNNKLVILQTHDAGNPI--KDNTGIPILTCDIWEHAYYIDYRNDRASYVKAWWNLVNWNFANENLKK 194
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODF_PLAFA (Superoxide dismutase [Fe] OS=Plasmodium falciparum GN=SODB PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.969e-18 Identity = 45/127 (35.43%), Postives = 73/127 (57.48%), Query Frame = -2 Query: 315 NHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 695 NH+ +W ++ P + GGEP H + I FGS ++ S GSGW WL L+ K ++++T +P+ K T +P+L D+WEHAYY+ Y+N + Y+K WN++NW +A++ +K Sbjct: 73 NHTFYWDSMGP--DCGGEP-HGEIKEKIQEDFGSFNNFKEQFSNILCGHFGSGWGWLALNNNNKLVILQTHDAGNPI--KDNTGIPILTCDIWEHAYYIDYRNDRASYVKAWWNLVNWNFANENLKK 194
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODF_PLAF7 (Superoxide dismutase [Fe] OS=Plasmodium falciparum (isolate 3D7) GN=SODB PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.969e-18 Identity = 45/127 (35.43%), Postives = 73/127 (57.48%), Query Frame = -2 Query: 315 NHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 695 NH+ +W ++ P + GGEP H + I FGS ++ S GSGW WL L+ K ++++T +P+ K T +P+L D+WEHAYY+ Y+N + Y+K WN++NW +A++ +K Sbjct: 73 NHTFYWDSMGP--DCGGEP-HGEIKEKIQEDFGSFNNFKEQFSNILCGHFGSGWGWLALNNNNKLVILQTHDAGNPI--KDNTGIPILTCDIWEHAYYIDYRNDRASYVKAWWNLVNWNFANENLKK 194
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODF_NICPL (Superoxide dismutase [Fe], chloroplastic (Fragment) OS=Nicotiana plumbaginifolia GN=SODB PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.184e-18 Identity = 51/124 (41.13%), Postives = 71/124 (57.26%), Query Frame = -2 Query: 330 NHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTAN-QDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIW-NVMNWKYAS 695 NH FW+++ P GGGEP L I+ FGS +A +++ A A GSGW WL E K+L + T N ++PLV PLL IDVWEHAYYL ++N +PDY+ +++W+ S Sbjct: 77 NHQFFWESMKP--NGGGEPSGELLE-LINRDFGSYDAFVKEFKAAAATQFGSGWAWLAYKPEEKKLALVKTPNAENPLVLG---YTPLLTIDVWEHAYYLDFQNRRPDYISIFMEKLVSWEAVS 194
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODF_SULSO (Superoxide dismutase [Fe] OS=Sulfolobus solfataricus GN=sod PE=1 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 6.770e-18 Identity = 49/130 (37.69%), Postives = 71/130 (54.62%), Query Frame = -2 Query: 315 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 704 GH H+++W+N+AP +GGG+P +L I+ +GS + Q + +L G+GW L DTE L + T N + +L +D +EHAYYLQYKN + DY+ WNV+NW A QK Sbjct: 81 GHKLHALYWENMAPSGKGGGKPG-GALADLINKQYGSFDRFKQVFTETANSLPGTGWAVLYYDTESGNLQIMTFENH--FQNHIAEIPIILILDEFEHAYYLQYKNKRADYVNAWWNVVNWDAAEKKLQK 207
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODF_STRCO (Superoxide dismutase [Fe-Zn] 1 OS=Streptomyces coelicolor GN=sodF1 PE=1 SV=3) HSP 1 Score: 90.8929 bits (224), Expect = 8.843e-18 Identity = 51/133 (38.35%), Postives = 71/133 (53.38%), Query Frame = -2 Query: 318 GHVNHSIFWKNLAPVHEGGGEPPHSS----LGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 704 GH+ HSI+W N+ +GGGEP L AI FGS +++ A QGSGW L + RL+VE + V + T P+L D WEHA+YLQYKN K D++ +W V+NW+ + Y+ Sbjct: 72 GHILHSIYWHNMTG--DGGGEPLDKDGVGELADAIAESFGSFAGFRAQLTKAAATTQGSGWGVLAYEPLSGRLIVEQIYDHQGNVGQGST--PILVFDAWEHAFYLQYKNQKVDFIDAMWAVVNWQDVARRYE 200
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODF_COXBU (Superoxide dismutase [Fe] OS=Coxiella burnetii GN=sodB PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 8.843e-18 Identity = 47/122 (38.52%), Postives = 65/122 (53.28%), Query Frame = -2 Query: 336 HVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKY 701 H NH+ +W ++P +GGG+P L AID FGSLE + GSGW WL D K V+ T ++P+ PL+ DVWEHAYY+ +N +P Y+ N W V+NW + Sbjct: 71 HWNHTFYWHCMSP--DGGGDPS-GELASAIDKTFGSLEKFKALFTDSANNHFGSGWAWLVKDNNGKLEVLSTVNARNPMTEGKK---PLMTCDVWEHAYYIDTRNDRPKYVNNFWQVVNWDF 186 The following BLAST results are available for this feature:
BLAST of CN185705 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 213
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185705 ID=CN185705; Name=CN185705; organism=Citrus sinensis; type=EST; length=798bpback to top |