CN185705
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_MYCSZ (Superoxide dismutase [Mn] (Fragment) OS=Mycobacterium szulgai GN=sodA PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.931e-14 Identity = 43/100 (43.00%), Postives = 57/100 (57.00%), Query Frame = -2 Query: 408 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPT-LVPLLGIDVWEHA 704 GHVNH+I+WKNL+P GG+ P L AID FGS + + A +QGSGW LG DT +L++ + T P +VPLL +D+WEHA Sbjct: 45 GHVNHTIWWKNLSP---NGGDKPTGELAAAIDDAFGSFDTFSAQFHAASTTVQGSGWAALGWDTLGNKLLIFQVYDHQ---TNFPLGIVPLLLLDMWEHA 138
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODF_CAMJJ (Superoxide dismutase [Fe] OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=sodB PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.746e-14 Identity = 41/130 (31.54%), Postives = 70/130 (53.85%), Query Frame = -2 Query: 318 NHSIFWKNLAPVHE----GGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 695 NH ++ + P G + ++L A++ FGSLE + + GSGW WL +T+ ++L T+N +T+ VPLL +DVWEHAYY+ ++N +P YL+ + +NW++ + Y+ Sbjct: 72 NHDFYFDCIKPSTGCGCGGSCQSIDANLQAALEKEFGSLENFKAEFIKGATGVFGSGWFWLVYNTKNQKLEFVGTSNAATPITEDK--VPLLVVDVWEHAYYVDHRNARPAYLEKFYAHINWEFVAKAYE 199
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODF_CAMJE (Superoxide dismutase [Fe] OS=Campylobacter jejuni GN=sodB PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.746e-14 Identity = 41/130 (31.54%), Postives = 70/130 (53.85%), Query Frame = -2 Query: 318 NHSIFWKNLAPVHE----GGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 695 NH ++ + P G + ++L A++ FGSLE + + GSGW WL +T+ ++L T+N +T+ VPLL +DVWEHAYY+ ++N +P YL+ + +NW++ + Y+ Sbjct: 72 NHDFYFDCIKPSTGCGCGGSCQSIDANLQAALEKEFGSLENFKAEFIKGATGVFGSGWFWLVYNTKNQKLEFVGTSNAATPITEDK--VPLLVVDVWEHAYYVDHRNARPAYLEKFYAHINWEFVAKAYE 199
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_MYCMR (Superoxide dismutase [Mn] (Fragment) OS=Mycobacterium marinum GN=sodA PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.012e-13 Identity = 43/100 (43.00%), Postives = 57/100 (57.00%), Query Frame = -2 Query: 408 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPT-LVPLLGIDVWEHA 704 GHVNH+I+WKNL+P GG+ P L AID FGS + + A +QGSGW LG DT +L++ + T P +VPLL +D+WEHA Sbjct: 45 GHVNHTIWWKNLSP---NGGDKPTGELAAAIDEAFGSFDKFRAQFHAAATTVQGSGWAALGWDTLGNKLLIFQVYDHQ---TNFPLGIVPLLLLDMWEHA 138
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODF_RHOCA (Superoxide dismutase [Fe] OS=Rhodobacter capsulatus GN=sodB PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.254e-13 Identity = 42/122 (34.43%), Postives = 65/122 (53.28%), Query Frame = -2 Query: 339 HVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWN-VMNWK 701 H NH+ FW+ + P G + +L A+ FGS+ + +A GA GSGW WL D++ + +T +PL L LG DVWEH+YY+ ++N +P YL N + ++NW+ Sbjct: 79 HWNHAQFWEMMGP---GEDKKMPGALEKALVESFGSVAKFKEDFAAAGAGQFGSGWAWLVKDSDGALKITKTENGVNPLCFGQTAL---LGCDVWEHSYYIDFRNKRPAYLTNFLDKLVNWE 194
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODF_SOYBN (Superoxide dismutase [Fe], chloroplastic OS=Glycine max GN=SODB PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.944e-13 Identity = 45/125 (36.00%), Postives = 60/125 (48.00%), Query Frame = -2 Query: 369 NHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGL----------------DTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYL 695 NH FW+ + P GGG P L I+ FGS + + A A GSGW WL D + K +V+++ +PLV PLL IDVWEHAYYL ++N +PDY+ Sbjct: 102 NHDFFWECMKP---GGGGKPSGELLELIERDFGSFVKFLDEFKAAAATQFGSGWAWLAYRARKFDGENVANPPSPDEDNKLVVLKSPNAVNPLVWGG--YYPLLTIDVWEHAYYLDFQNRRPDYI 221
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODF_AQUAE (Superoxide dismutase [Fe] OS=Aquifex aeolicus GN=sodB PE=3 SV=3) HSP 1 Score: 74.3294 bits (181), Expect = 8.565e-13 Identity = 46/130 (35.38%), Postives = 68/130 (52.31%), Query Frame = -2 Query: 315 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 704 G V H +++ LAP GG P +L I+ G L+A ++ A AA+ GW LGLD RLVV + V L+PL+ ID +EHAYY+ YKN +P Y+ + +NW ++ ++K Sbjct: 78 GVVLHELYFGMLAP---GGKGEPSEALKKKIEEDLGGLDACTNELKA--AAIAFRGWAILGLDIFSGRLVVNGLDAHN--VYNLTGLIPLIVIDTYEHAYYVDYKNKRPPYIDAFFKNINWDVVNERFEK 200
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_MYCCE (Superoxide dismutase [Mn] (Fragment) OS=Mycobacterium celatum GN=sodA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.119e-12 Identity = 42/102 (41.18%), Postives = 57/102 (55.88%), Query Frame = -2 Query: 408 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQD---PLVTKAPTLVPLLGIDVWEHA 704 GHVNH+I+WKNL+P GG+ P L AID FGS + + A +QGSGW LG D ++L++ + PL +VPLL +D+WEHA Sbjct: 45 GHVNHTIWWKNLSP---NGGDKPTGELAAAIDDAFGSFDKFRAQFHAAATTVQGSGWAALGWDNLGEKLLIFQVYDHQSNFPL-----GVVPLLLLDMWEHA 138
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_HALMA (Superoxide dismutase [Mn] OS=Haloarcula marismortui GN=sod PE=3 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 2.492e-12 Identity = 45/130 (34.62%), Postives = 63/130 (48.46%), Query Frame = -2 Query: 315 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 704 GH H++FW+N+ P GGGEP L I+ FGS E K E AA GW L D K+L D P+L +DVWEH+YY Y + D++ + V++W A++ Y+K Sbjct: 75 GHYLHTLFWENMDP--NGGGEPEGELLD-RIEEDFGSYEGW--KGEFEAAASAAGGWALLVYDPVAKQLRNVPVDKHDQGALWGSH--PILALDVWEHSYYYDYGPARGDFIDAFFEVVDWDKAAEEYEK 197
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODF_AQUPY (Superoxide dismutase [Fe] OS=Aquifex pyrophilus GN=sodB PE=1 SV=3) HSP 1 Score: 72.7886 bits (177), Expect = 2.492e-12 Identity = 45/130 (34.62%), Postives = 67/130 (51.54%), Query Frame = -2 Query: 315 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 704 G V H +++ L P GG P +L I+ G L+A ++ A AA+ GW LGLD RLVV + V L+PL+ ID +EHAYY+ YKN +P Y+ + +NW ++ ++K Sbjct: 78 GVVLHELYFGMLTP---GGKGEPSEALKKKIEEDIGGLDACTNELKA--AAMAFRGWAILGLDIFSGRLVVNGLDAHN--VYNLTGLIPLIVIDTYEHAYYVDYKNKRPPYIDAFFKNINWDVVNERFEK 200 The following BLAST results are available for this feature:
BLAST of CN185705 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 213
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185705 ID=CN185705; Name=CN185705; organism=Citrus sinensis; type=EST; length=798bpback to top |