CN185705
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM1_HALSA (Superoxide dismutase [Mn] 1 OS=Halobacterium salinarium GN=sod1 PE=1 SV=3) HSP 1 Score: 69.707 bits (169), Expect = 2.110e-11 Identity = 45/161 (27.95%), Postives = 71/161 (44.10%), Query Frame = -2 Query: 315 NKAVEQLFSSFEQSRHFHRRPVAGRYQVQRRGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 797 N A E L + E H G GH+ H++FW++++P GG+ P +L I FGS E + E AA SGW L D+ L N D P+L +DVWEH+YY Y + ++ + V++W ++ +++ Sbjct: 41 NDAEETLAENRETGDHASTAGALGDVTHNGSGHILHTLFWQSMSPA---GGDEPSGALADRIAADFGSYENW--RAEFEAAASAASGWALLVYDSHSNTLRNVAVDNHDEGALWGSH--PILALDVWEHSYYYDYGPDRGSFVDAFFEVVDWDEPTERFEQ 194
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM2_HALVO (Superoxide dismutase [Mn] 2 OS=Halobacterium volcanii GN=sod2 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.598e-11 Identity = 44/132 (33.33%), Postives = 66/132 (50.00%), Query Frame = -2 Query: 315 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRL--VVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 704 GH+ H +FW+N++P GG+ P L I FGS EA K E AA +GW L D+ +L VV +Q L P +L +DVWEH+YY Y + D++ + V++W + Y++ Sbjct: 71 GHILHDLFWQNMSPE---GGDEPEGLLAERIAEDFGSYEAW--KGEFEAAAGAAAGWALLVYDSFSNQLRNVVVDKHDQGALWGSHP----ILALDVWEHSYYHDYGPARGDFVSAFFEVVDWDEPAARYEQ 193
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM1_HALVO (Superoxide dismutase [Mn] 1 OS=Halobacterium volcanii GN=sod1 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.598e-11 Identity = 44/132 (33.33%), Postives = 66/132 (50.00%), Query Frame = -2 Query: 315 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRL--VVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 704 GH+ H +FW+N++P GG+ P L I FGS EA K E AA +GW L D+ +L VV +Q L P +L +DVWEH+YY Y + D++ + V++W + Y++ Sbjct: 72 GHILHDLFWQNMSPE---GGDEPEGLLAERIAEDFGSYEAW--KGEFEAAAGAAAGWALLVYDSFSNQLRNVVVDKHDQGALWGSHP----ILALDVWEHSYYHDYGPARGDFVSAFFEVVDWDEPAARYEQ 194 The following BLAST results are available for this feature:
BLAST of CN185705 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 213
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185705 ID=CN185705; Name=CN185705; organism=Citrus sinensis; type=EST; length=798bpback to top |