CN185705
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_DEBHA (Probable superoxide dismutase [Mn], mitochondrial OS=Debaryomyces hansenii GN=DEHA2E01232g PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.899e-28 Identity = 71/159 (44.65%), Postives = 95/159 (59.75%), Query Frame = -2 Query: 330 NKAVEQLFSSFEQSRHFHRRPVAGRYQVQRRGHVNHSIFWKNLAPVHEGGGEPPHS--SLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFK-RLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYAS 797 N A+EQL + Q + + GH NH +FWK+LAP + GG+ P S +LG I +GS++ LI +A+ A++QGSGW ++ + + L V TT NQD T LVPL+ ID WEHAYYLQY+NVK DY K IWNV+NW+ AS Sbjct: 49 NSAIEQLIEAESQGDVKKAIVIQQNIKFHGGGHTNHVLFWKSLAPNSQNGGKHPGSDTNLGKKIIEQYGSIDNLISITNAKLASIQGSGWAFIVKNKQNGGNLDVVTTYNQD---TVTDPLVPLIAIDAWEHAYYLQYQNVKADYFKAIWNVINWEEAS 204
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_CORDI (Superoxide dismutase [Mn] OS=Corynebacterium diphtheriae GN=sodA PE=3 SV=2) HSP 1 Score: 125.176 bits (313), Expect = 4.231e-28 Identity = 65/121 (53.72%), Postives = 76/121 (62.81%), Query Frame = -2 Query: 342 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNW 704 GH NHSIFWKNL+P GGGEP +L AI FGS E SA LQGSGW LG D RLV+E +Q ++ L PLL +D+WEHA+YLQYKNVK DY+K +WNV NW Sbjct: 72 GHTNHSIFWKNLSP--NGGGEPT-GALAEAIAKEFGSFEKFKDHFSAAALGLQGSGWAVLGYDHIGGRLVIEQLTDQQGNISA--NLTPLLMLDMWEHAFYLQYKNVKADYVKAVWNVFNW 187
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_DROME (Superoxide dismutase [Mn], mitochondrial OS=Drosophila melanogaster GN=Sod2 PE=2 SV=3) HSP 1 Score: 124.79 bits (312), Expect = 5.526e-28 Identity = 66/161 (40.99%), Postives = 94/161 (58.39%), Query Frame = -2 Query: 315 NKAVEQLFSSFEQSRHFHRRPVAGRYQVQRRGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 797 N A EQL + +S +A + GH+NH+IFW+NL+P P L AI++ + SLE ++++ A+QGSGW WLG + + +L + NQDPL L+PL GIDVWEHAYYLQYKNV+P Y++ IW++ NW S +Q+ Sbjct: 56 NAAEEQLEEAKSKSDTTKLIQLAPALRFNGGGHINHTIFWQNLSP----NKTQPSDDLKKAIESQWKSLEEFKKELTTLTVAVQGSGWGWLGFNKKSGKLQLAALPNQDPLEASTG-LIPLFGIDVWEHAYYLQYKNVRPSYVEAIWDIANWDDISCRFQE 211
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_MYCPA (Superoxide dismutase [Mn] OS=Mycobacterium paratuberculosis GN=sodA PE=1 SV=3) HSP 1 Score: 122.865 bits (307), Expect = 2.100e-27 Identity = 62/121 (51.24%), Postives = 76/121 (62.81%), Query Frame = -2 Query: 342 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNW 704 GHVNHSI+WKNL+P GG+ P L AID FGS + + SA LQGSGW LG DT RL+ +Q V ++PLL +D+WEHA+YLQYKNVK DY+K WNV+NW Sbjct: 72 GHVNHSIWWKNLSP---DGGDKPTGELAAAIDDAFGSFDKFRAQFSAAANGLQGSGWAVLGYDTVGSRLLTFQLYDQQANVPLG--IIPLLQVDMWEHAFYLQYKNVKADYVKAFWNVVNW 187
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_THEAQ (Superoxide dismutase [Mn] OS=Thermus aquaticus GN=sodA PE=3 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 2.742e-27 Identity = 62/129 (48.06%), Postives = 81/129 (62.79%), Query Frame = -2 Query: 318 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 704 GH+NHS+FW+ L P GG + P L AID FG AL +K++ GSGW WL D F +L V +TANQD V P++GIDVWEHAYYL+Y+N + DYL+ IWNV+NW A ++Y+ Sbjct: 80 GHLNHSLFWRLLTP---GGAKEPVGELKKAIDEQFGGFAALKEKLTQAAMGRFGSGWAWLVKDP-FGKLHVISTANQDNPVMGG--FAPIVGIDVWEHAYYLKYQNRRADYLQAIWNVLNWDVAEEIYK 202
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_NOCAS (Superoxide dismutase [Mn] OS=Nocardia asteroides GN=sodA PE=3 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 2.742e-27 Identity = 69/165 (41.82%), Postives = 93/165 (56.36%), Query Frame = -2 Query: 315 NKAVEQLFSSFEQSRH----FHRRPVAGRYQVQRRGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 797 N A+E+L ++ E H H + +A GHVNHSI+WKNL+P GG+ P L AID FGS + + +A LQGSGW LG DT ++L+ +Q V ++PLL +D+WEHA+YLQYKNVK DY+ WNV+NW D + K Sbjct: 41 NTALEKLEAAREAGDHSAIFLHEKNLA----FHLGGHVNHSIWWKNLSP---NGGDKPVGELAAAIDDQFGSFDKFRAQFTAAANGLQGSGWAVLGYDTLGQKLLTFQLYDQQANVPLG--IIPLLQVDMWEHAFYLQYKNVKADYVTAFWNVVNWADVQDRFGK 196
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_MYCSC (Superoxide dismutase [Mn] (Fragment) OS=Mycobacterium scrofulaceum GN=sodA PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.742e-27 Identity = 62/121 (51.24%), Postives = 76/121 (62.81%), Query Frame = -2 Query: 342 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNW 704 GHVNHSI+WKNL+P GG+ P L AID FGS + + SA LQGSGW LG DT RL+ +Q V ++PLL +D+WEHA+YLQYKNVK DY+K WNV+NW Sbjct: 46 GHVNHSIWWKNLSP---DGGDKPTGELAAAIDDAFGSFDKFRAQFSAAANGLQGSGWAVLGYDTLGSRLLTFQLYDQQANVPLG--IIPLLQVDMWEHAFYLQYKNVKADYVKAFWNVVNW 161
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_MYCIT (Superoxide dismutase [Mn] (Fragment) OS=Mycobacterium intracellulare GN=sodA PE=3 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 2.742e-27 Identity = 62/121 (51.24%), Postives = 76/121 (62.81%), Query Frame = -2 Query: 342 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNW 704 GHVNHSI+WKNL+P GG+ P L AID FGS + + SA LQGSGW LG DT RL+ +Q V ++PLL +D+WEHA+YLQYKNVK DY+K WNV+NW Sbjct: 46 GHVNHSIWWKNLSP---DGGDKPTGELAAAIDDAFGSFDRFRAQFSAAANGLQGSGWAVLGYDTLGNRLLTFQLYDQQANVPLG--IIPLLQVDMWEHAFYLQYKNVKADYVKAFWNVVNW 161
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_MYCAV (Superoxide dismutase [Mn] OS=Mycobacterium avium GN=sodA PE=3 SV=3) HSP 1 Score: 122.479 bits (306), Expect = 2.742e-27 Identity = 62/121 (51.24%), Postives = 76/121 (62.81%), Query Frame = -2 Query: 342 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNW 704 GHVNHSI+WKNL+P GG+ P L AID FGS + + SA LQGSGW LG DT RL+ +Q V ++PLL +D+WEHA+YLQYKNVK DY+K WNV+NW Sbjct: 72 GHVNHSIWWKNLSP---DGGDKPTGELAAAIDDAFGSFDKFRAQFSAAANGLQGSGWAVLGYDTLGSRLLTFQLYDQQANVPLG--IIPLLQVDMWEHAFYLQYKNVKADYVKAFWNVVNW 187
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_THET8 (Superoxide dismutase [Mn] OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=sodA PE=1 SV=2) HSP 1 Score: 122.094 bits (305), Expect = 3.582e-27 Identity = 62/130 (47.69%), Postives = 83/130 (63.85%), Query Frame = -2 Query: 315 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 704 GH+NHS+FW+ L P GG + P L AID FG +AL +K++ GSGW WL D F +L V +T NQD V + T P++GIDVWEHAYYL+Y+N + DYL+ IWNV+NW A + ++K Sbjct: 80 GHLNHSLFWRLLTP---GGAKEPVGELKKAIDEQFGGFQALKEKLTQAAMGRFGSGWAWLVKDP-FGKLHVLSTPNQDNPVMEGFT--PIVGIDVWEHAYYLKYQNRRADYLQAIWNVLNWDVAEEFFKK 203 The following BLAST results are available for this feature:
BLAST of CN185705 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 213
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185705 ID=CN185705; Name=CN185705; organism=Citrus sinensis; type=EST; length=798bpback to top |