CN185702
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185702 vs. ExPASy Swiss-Prot
Match: ATL4I_ARATH (Putative RING-H2 finger protein ATL4I OS=Arabidopsis thaliana GN=ATL4I PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.120e-14 Identity = 52/146 (35.62%), Postives = 76/146 (52.05%), Query Frame = -3 Query: 324 LRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLTPESNKKVKLCDSNNESNQTHNNSASELSGEQSRAVIDINDEQSNSDAQVLEITNAASHVTPMRNRPPRLGMPERFPRSHSTGHSLVLAGVSVE-RYTLRFPDEVRKKLMTRG 758 LRLL C HVFH CID+W SH TCPVCR +L P + ++ ++ + E S ++ D + +Q+ + + S + +N +PE+F RSHSTGHS+V E +YTLR P+ V+ K +TRG Sbjct: 123 LRLLTTCYHVFHQECIDLWFESHRTCPVCRRDLDPPPPPE----NTKPTVDEMIIDVIQETSDDEED---DHHRQQTTTQIDTWPSSGQTSSIKKEQN------LPEKFSRSHSTGHSIVRNKPEEEDKYTLRLPEHVKIK-VTRG 254
BLAST of CN185702 vs. ExPASy Swiss-Prot
Match: ATL3A_ARATH (RING-H2 finger protein ATL3A OS=Arabidopsis thaliana GN=ATL3A PE=2 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 7.261e-14 Identity = 48/126 (38.10%), Postives = 66/126 (52.38%), Query Frame = -3 Query: 387 ETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLTPESNKKVKLCDSNNESNQTHNNSASELSGEQSRAVIDINDEQSNSDAQVLEITNAASHVTPMRNRPPRLGMPERFPRSHSTGHSLVLAGV 764 E+LRLLPKC+H FH CID WL SH CP+CRA + S V++ D N+ T NNS S +G+ S V++++ E S S E N S P + R G R +S G + +A + Sbjct: 170 ESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCRAFIVTSS--AVEIVDLTNQQIVTENNSIS--TGDDSVVVVNLDLENSRSRN---ETVNEGSTPKPPEMQDSRDGEERRSASLNSGGGVVSIADI 288
BLAST of CN185702 vs. ExPASy Swiss-Prot
Match: ATL5C_ARATH (RING-H2 finger protein ATL5C OS=Arabidopsis thaliana GN=ATL5C PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 5.753e-11 Identity = 36/85 (42.35%), Postives = 44/85 (51.76%), Query Frame = -3 Query: 555 ETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLTPES-------NKKVKLCDSNNESNQTHNN--------SASELSGEQSRA 764 E LRLLPKC H FH C+D WL +H TCP+CR + PE N +L S +ESN +NN S +SG S A Sbjct: 157 EVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPEDILLIGDCNSWFELQFSKDESNSVNNNPPGLTRFIPVSRISGRHSSA 241 The following BLAST results are available for this feature:
BLAST of CN185702 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185702 ID=CN185702; Name=CN185702; organism=Citrus sinensis; type=EST; length=766bpback to top |