CN185699

Overview
NameCN185699
Unique NameCN185699
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length737
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: TERA_BOVIN (Transitional endoplasmic reticulum ATPase OS=Bos taurus GN=VCP PE=1 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.311e-49
Identity = 104/149 (69.80%), Postives = 116/149 (77.85%), Query Frame = -2
Query:  290 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRSENPXXXXXXXXXXXXEIKAVPSAESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFP 736
            DIIDPA+LRPGRLDQLIYIPLPDE+SR+ I KA LRKSPV+KDVDL  LAK T GFSGAD+TEICQRACK AIRE+IE +I RER R  NP            EI+     E+M++ARRSVSD DIRKY+ FAQTLQQSRGFGS FRFP
Sbjct:  627 DIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGS-FRFP 774          
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: TERA_XENTR (Transitional endoplasmic reticulum ATPase OS=Xenopus tropicalis GN=vcp PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.712e-49
Identity = 104/149 (69.80%), Postives = 116/149 (77.85%), Query Frame = -2
Query:  290 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRSENPXXXXXXXXXXXXEIKAVPSAESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFP 736
            DIIDPA+LRPGRLDQLIYIPLPDE+SR+ I KA LRKSPV+KDVDL  LAK T GFSGAD+TEICQRACK AIRE+IE +I RER R  NP            EI+     E+M++ARRSVSD DIRKY+ FAQTLQQSRGFGS FRFP
Sbjct:  627 DIIDPAILRPGRLDQLIYIPLPDEKSRIAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGS-FRFP 774          
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: TERA_XENLA (Transitional endoplasmic reticulum ATPase OS=Xenopus laevis GN=vcp PE=1 SV=3)

HSP 1 Score: 194.126 bits (492), Expect = 6.504e-49
Identity = 103/149 (69.13%), Postives = 116/149 (77.85%), Query Frame = -2
Query:  290 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRSENPXXXXXXXXXXXXEIKAVPSAESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFP 736
            DIIDPA+LRPGRLDQLIYIPLPDE+SR+ I KA LRKSPV+KDVD+  LAK T GFSGAD+TEICQRACK AIRE+IE +I RER R  NP            EI+     E+M++ARRSVSD DIRKY+ FAQTLQQSRGFGS FRFP
Sbjct:  627 DIIDPAILRPGRLDQLIYIPLPDEKSRMAILKANLRKSPVAKDVDVDFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERDRQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGS-FRFP 774          
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: TERA2_CAEEL (Transitional endoplasmic reticulum ATPase homolog 2 OS=Caenorhabditis elegans GN=cdc-48.2 PE=1 SV=2)

HSP 1 Score: 189.889 bits (481), Expect = 1.227e-47
Identity = 101/157 (64.33%), Postives = 117/157 (74.52%), Query Frame = -2
Query:  278 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDI----ERERRRSENPXXXXXXXXXXXXEIKAVPSAESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPDAAP 736
            DIIDPA+LRPGRLDQLIYIPLPDE SRLQIFKA LRK+P+S D+DL  LAK T GFSGAD+TEICQRACK AIRE+IE++I    ER+ R +               EI      E+MK+ARRSV+D DIRKY+ FAQTLQQSRGFG+ F+FP  AP
Sbjct:  632 DIIDPAVLRPGRLDQLIYIPLPDEASRLQIFKASLRKTPLSADLDLNFLAKNTVGFSGADLTEICQRACKLAIRESIEREIRQEKERQDRSARGEELMEDELADPVPEITRAHFEEAMKFARRSVTDNDIRKYEMFAQTLQQSRGFGNNFKFPGEAP 788          
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: TERA_DROME (Transitional endoplasmic reticulum ATPase TER94 OS=Drosophila melanogaster GN=TER94 PE=1 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 4.661e-47
Identity = 99/150 (66.00%), Postives = 115/150 (76.67%), Query Frame = -2
Query:  290 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRSENP-XXXXXXXXXXXXEIKAVPSAESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFP 736
            DIIDPA+LRPGRLDQLIYIPLPD++SR  I KA LRKSP++K+VDL  +AK TQGFSGAD+TEICQRACK AIR+ IE +I RE+ R+EN              EI +    E+MK+ARRSVSD DIRKY+ FAQTLQQSRGFG  FRFP
Sbjct:  624 DIIDPAILRPGRLDQLIYIPLPDDKSREAILKANLRKSPLAKEVDLTYIAKVTQGFSGADLTEICQRACKLAIRQAIEAEIRREKERAENQNSAMDMDEDDPVPEITSAHFEEAMKFARRSVSDNDIRKYEMFAQTLQQSRGFGQNFRFP 773          
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: TERA1_CAEEL (Transitional endoplasmic reticulum ATPase homolog 1 OS=Caenorhabditis elegans GN=cdc-48.1 PE=1 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 3.021e-46
Identity = 99/153 (64.71%), Postives = 115/153 (75.16%), Query Frame = -2
Query:  290 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDI----ERERRRSENPXXXXXXXXXXXXEIKAVPSAESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFP 736
            DIIDPA+LRPGRLDQLIYIPLPDE SR QI KA LRK+P+SKD+DL  LAK T GFSGAD+TEICQRACK AIRE+IEK+I    ER+ R++               EI      E+MK+ARRSV+D DIRKY+ FAQTLQQSRGFG+ F+FP
Sbjct:  634 DIIDPAVLRPGRLDQLIYIPLPDEASRHQILKASLRKTPLSKDLDLTFLAKNTVGFSGADLTEICQRACKLAIRESIEKEIRIEKERQDRQARGEELMEDDAVDPVPEITRAHFEEAMKFARRSVTDNDIRKYEMFAQTLQQSRGFGNNFKFP 786          
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: CDC48_SCHPO (Cell division cycle protein 48 OS=Schizosaccharomyces pombe GN=cdc48 PE=1 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 3.465e-34
Identity = 79/152 (51.97%), Postives = 105/152 (69.08%), Query Frame = -2
Query:  284 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRSENP-XXXXXXXXXXXXEIKAVPSAESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPDA 736
            D IDPAL+RPGRLDQLIY+PLPDEE+R  I +  LR +PV++DVDLRA+AK T GFSGAD+  + QRA K AI+++IE+DI+RE    E P             +++     E+MK ARRSVSDA++R+Y+A+A  L  SRG  + F+F  A
Sbjct:  646 DQIDPALMRPGRLDQLIYVPLPDEEARFSILQTQLRHTPVAEDVDLRAVAKATHGFSGADLEFVVQRAVKLAIKDSIEEDIKRENETGEAPADDVVMDEDASVSQVQRHHVEEAMKMARRSVSDAEVRRYEAYAHQLLTSRGL-TGFQFDSA 796          
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: CDC48_YEAST (Cell division control protein 48 OS=Saccharomyces cerevisiae GN=CDC48 PE=1 SV=3)

HSP 1 Score: 138.272 bits (347), Expect = 4.236e-32
Identity = 77/163 (47.24%), Postives = 101/163 (61.96%), Query Frame = -2
Query:  284 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRR------------SENPXXXXXXXXXXXXEIKAVPSAESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPDA 736
            D IDPA+LRPGRLDQLIY+PLPDE +RL I  A LRK+P+   ++L A+AK TQGFSGAD+  I QRA KYAI+++IE   + E  +             E               I     AE+MK A+RSVSDA++R+Y+A++Q ++ SRG  S F F DA
Sbjct:  637 DQIDPAILRPGRLDQLIYVPLPDENARLSILNAQLRKTPLEPGLELTAIAKATQGFSGADLLYIVQRAAKYAIKDSIEAHRQHEAEKEVKVEGEDVEMTDEGAKAEQEPEVDPVPYITKEHFAEAMKTAKRSVSDAELRRYEAYSQQMKASRGQFSNFNFNDA 799          
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: CDC48_ENCCU (Cell division control protein 48 OS=Encephalitozoon cuniculi GN=CDC48 PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.780e-30
Identity = 66/137 (48.18%), Postives = 99/137 (72.26%), Query Frame = -2
Query:  326 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRSENPXXXXXXXXXXXXEIKAVPSAESMKYARRSVSDADIRKYQAFAQTLQ 736
            D +D AL+RPGRLDQL+YIPLPD +SR+ I +A L+K+P+S ++DLR LA+ T  FSGAD++EICQRACK AIRE IE ++E++++ SE               ++     +S+K ARRSVS+ ++ +Y+AFA++++
Sbjct:  630 DQLDSALMRPGRLDQLVYIPLPDLDSRVSILQATLKKTPLSPEIDLRQLAEATDKFSGADLSEICQRACKLAIRETIEYELEQKKKGSE-----MMDLEDPVPYLRPDHLVQSLKTARRSVSEKEVERYEAFARSMK 761          
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: CDC48_EMENI (Cell division control protein 48 OS=Emericella nidulans GN=cdc48 PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.324e-30
Identity = 75/153 (49.02%), Postives = 100/153 (65.36%), Query Frame = -2
Query:  284 IDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRR----SENPXXXXXXXXXXXXEIKAVPSAESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPDA 730
            +D AL+RPGRLD L+Y+PLPD+ SR  I KA LRK+PV+ DVD+  +A  T GFSGAD+  + QRA K AI+E+I  +IER+++R     +              E+      E+MK ARRSVSD +IR+Y+AFAQ+L+ S G  S FRFP A
Sbjct:  655 LDAALVRPGRLDTLVYVPLPDQASREGILKAQLRKTPVASDVDIEFIASKTHGFSGADLGFVTQRAVKLAIKESISAEIERQKQREAAGEDVKMEDEEEGEDPVPELTRAHFEEAMKTARRSVSDVEIRRYEAFAQSLKNSGG-SSFFRFPSA 806          
The following BLAST results are available for this feature:
BLAST of CN185699 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
TERA_BOVIN1.311e-4969.80Transitional endoplasmic reticulum ATPase OS=Bos t... [more]
TERA_XENTR1.712e-4969.80Transitional endoplasmic reticulum ATPase OS=Xenop... [more]
TERA_XENLA6.504e-4969.13Transitional endoplasmic reticulum ATPase OS=Xenop... [more]
TERA2_CAEEL1.227e-4764.33Transitional endoplasmic reticulum ATPase homolog ... [more]
TERA_DROME4.661e-4766.00Transitional endoplasmic reticulum ATPase TER94 OS... [more]
TERA1_CAEEL3.021e-4664.71Transitional endoplasmic reticulum ATPase homolog ... [more]
CDC48_SCHPO3.465e-3451.97Cell division cycle protein 48 OS=Schizosaccharomy... [more]
CDC48_YEAST4.236e-3247.24Cell division control protein 48 OS=Saccharomyces ... [more]
CDC48_ENCCU1.780e-3048.18Cell division control protein 48 OS=Encephalitozoo... [more]
CDC48_EMENI2.324e-3049.02Cell division control protein 48 OS=Emericella nid... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001L22_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001L22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185699 ID=CN185699; Name=CN185699; organism=Citrus sinensis; type=EST; length=737bp
ATCTTGCAGAGTTTCATTTCATCCATTATAATCAAAATAGACCATTGCGT
TCCAGCAGCCTAAACTCATTTAACCTTTTCGGCTTTATGGCAGAAACATT
GAAGCTTTTGACAAATCATATGGCGAATCGTCAAATACATATGTAAACCA
ACATCAGCATAAATTAGACAGCAAACTGATAGACTTTAAACGGGGGGAGG
ATCTAACTGTAAAGATCATCGTCATCTGCGCCACCTGCAGAAGACGCAAA
AGGATCTGATCCGCCATCAGCACCAGGGGGAGCAGCATCAGGAAACCTAA
ATTCACTTCCAAACCCTCTTGACTGCTGCAATGTTTGAGCAAATGCTTGG
TATTTGCGTATGTCAGCATCACTGACACTTCTACGAGCATACTTCATTGA
TTCCGCGGAGGGCACAGCTTTAATCTCAGCCACTTCATCCTCTACATCCT
CCTCCATTGCCTCTGGGTTCTCACTTCTCCTCCTCTCCCTCTCAATATCT
TTCTCGATATTCTCTCGGATGGCATATTTGCAAGCCCGCTGGCATATTTC
AGTAATATCTGCACCACTAAAGCCTTGGGTGTACTTAGCAAGAGCTCTGA
GGTCAACATCTTTGGACACCGGTGATTTCCTCAAGCAAGCCTTGAAAATT
TGAAGGCGAGATTCCTCATCAGGGAGAGGGATATAAATCAACTGGTCAAG
ACGGCCTGGACGGAGAAGGGCAGGATCTATGATATCT
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