CN185699

Overview
NameCN185699
Unique NameCN185699
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length737
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: PSMR_METPE (Proteasome-activating nucleotidase OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=pan PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.417e-11
Identity = 39/91 (42.86%), Postives = 52/91 (57.14%), Query Frame = -2
Query:  488 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIR--------ENIEKDIER 736
            DI+D ALLRPGR D++I IP PD E R+ I         + K VD+R +A  T G +GAD+  IC  A  +AIR        E+ E+ IE+
Sbjct:  303 DILDRALLRPGRFDRIIEIPAPDIEGRVSILNIHCAGMNIDKKVDIRDIATRTDGKNGADLRSICMEAGMFAIRSDHEMVTLEDFEQSIEK 393          
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: PRS7_PRUPE (26S protease regulatory subunit 7 OS=Prunus persica GN=RPT1 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.417e-11
Identity = 37/84 (44.05%), Postives = 48/84 (57.14%), Query Frame = -2
Query:  485 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERE 736
            D +DPALLRPGRLD+ +   LPD ESR QIFK   R     +D+    LA+     +GADI  +C  A  YAIR   +   E++
Sbjct:  317 DTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKD 400          
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: PRS7A_ARATH (26S protease regulatory subunit 7 homolog A OS=Arabidopsis thaliana GN=RPT1A PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.417e-11
Identity = 37/84 (44.05%), Postives = 48/84 (57.14%), Query Frame = -2
Query:  485 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERE 736
            D +DPALLRPGRLD+ +   LPD ESR QIFK   R     +D+    LA+     +GADI  +C  A  YAIR   +   E++
Sbjct:  318 DTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKD 401          
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: FTSH_STRR6 (Cell division protease ftsH homolog OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=ftsH PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.850e-11
Identity = 32/76 (42.11%), Postives = 47/76 (61.84%), Query Frame = -2
Query:  509 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIREN 736
            D++DPALLRPGR D+ + +  PD + R  I K   +  P+++DVDL+ +A+ T GF GAD+  +   A   A R N
Sbjct:  336 DVLDPALLRPGRFDRKVLVGRPDVKGREAILKVHAKNKPLAEDVDLKLVAQQTPGFVGADLENVLNEAALVAARRN 411          
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: FTSH_STRPN (Cell division protease ftsH homolog OS=Streptococcus pneumoniae GN=ftsH PE=3 SV=3)

HSP 1 Score: 69.707 bits (169), Expect = 1.850e-11
Identity = 32/76 (42.11%), Postives = 47/76 (61.84%), Query Frame = -2
Query:  509 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIREN 736
            D++DPALLRPGR D+ + +  PD + R  I K   +  P+++DVDL+ +A+ T GF GAD+  +   A   A R N
Sbjct:  336 DVLDPALLRPGRFDRKVLVGRPDVKGREAILKVHAKNKPLAEDVDLKLVAQQTPGFVGADLENVLNEAALVAARRN 411          
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: CD48B_ARATH (Cell division control protein 48 homolog B OS=Arabidopsis thaliana GN=CDC48B PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.850e-11
Identity = 32/75 (42.67%), Postives = 50/75 (66.67%), Query Frame = -2
Query:  506 IDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENI 730
            ID AL+RPGR D ++Y+P PD E+R +I +   R   +  DVDLR +A+ T  F+GA++  +C+ +   ++RENI
Sbjct:  439 IDAALMRPGRFDLVLYVPPPDLEARFEILQVHTRNMTLGDDVDLRKIAEETDLFTGAELEGLCRESGTVSLRENI 513          
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: FTSH_HELFE (Cell division protease ftsH homolog OS=Helicobacter felis GN=ftsH PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.416e-11
Identity = 33/84 (39.29%), Postives = 55/84 (65.48%), Query Frame = -2
Query:  485 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERE 736
            +I+DPALLRPGR D+ + +  PD + R++I K  ++   ++ DVDL+ +AK T G +GAD+  I   A   A R N +K+++++
Sbjct:  327 EILDPALLRPGRFDRQVLVDKPDFKGRVEILKVHIKPVKLANDVDLQEIAKLTAGLAGADLANIINEAALLAGRNN-QKEVKQQ 409          
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: FTSH_BACPF (Cell division protease ftsH homolog OS=Bacillus pseudofirmus GN=ftsH PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.416e-11
Identity = 34/79 (43.04%), Postives = 47/79 (59.49%), Query Frame = -2
Query:  500 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEK 736
            DI+DPALLRPGR D+ I +  PD   R ++ K   R  P++ DV+L+ +A  T GFSGAD+  +   A   A R +  K
Sbjct:  315 DILDPALLRPGRFDRQIQVNRPDVNGREEVLKVHARNKPLNDDVNLKTIATRTPGFSGADLENLLNEAALVAARHDHTK 393          
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: PRS8_YEAST (26S protease regulatory subunit 8 homolog OS=Saccharomyces cerevisiae GN=RPT6 PE=1 SV=4)

HSP 1 Score: 68.9366 bits (167), Expect = 3.156e-11
Identity = 33/75 (44.00%), Postives = 49/75 (65.33%), Query Frame = -2
Query:  512 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRE 736
            DI+DPALLRPGR+D+ I  P P   +R +I +   RK  +++ ++LR +A+   G SGAD+  +C  A  YA+RE
Sbjct:  298 DILDPALLRPGRIDRKIEFPPPSVAARAEILRIHSRKMNLTRGINLRKVAEKMNGCSGADVKGVCTEAGMYALRE 372          
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: PEX1_PICPA (Peroxisome biosynthesis protein PAS1 OS=Pichia pastoris GN=PEX1 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.156e-11
Identity = 35/80 (43.75%), Postives = 49/80 (61.25%), Query Frame = -2
Query:  497 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKD 736
            D+ID ALLRPGRLD+ +   +PD + RL I ++  R   VSK V+L ++A    GFSGAD+  +   A   A+ E + KD
Sbjct:  946 DLIDSALLRPGRLDKSVICDMPDFDDRLDILQSVTRNMNVSKSVNLSSVAGECSGFSGADLQALAYNAYLKAVHEKLTKD 1025          
The following BLAST results are available for this feature:
BLAST of CN185699 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
PSMR_METPE1.417e-1142.86Proteasome-activating nucleotidase OS=Methanosphae... [more]
PRS7_PRUPE1.417e-1144.0526S protease regulatory subunit 7 OS=Prunus persic... [more]
PRS7A_ARATH1.417e-1144.0526S protease regulatory subunit 7 homolog A OS=Ara... [more]
FTSH_STRR61.850e-1142.11Cell division protease ftsH homolog OS=Streptococc... [more]
FTSH_STRPN1.850e-1142.11Cell division protease ftsH homolog OS=Streptococc... [more]
CD48B_ARATH1.850e-1142.67Cell division control protein 48 homolog B OS=Arab... [more]
FTSH_HELFE2.416e-1139.29Cell division protease ftsH homolog OS=Helicobacte... [more]
FTSH_BACPF2.416e-1143.04Cell division protease ftsH homolog OS=Bacillus ps... [more]
PRS8_YEAST3.156e-1144.0026S protease regulatory subunit 8 homolog OS=Sacch... [more]
PEX1_PICPA3.156e-1143.75Peroxisome biosynthesis protein PAS1 OS=Pichia pas... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001L22_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001L22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185699 ID=CN185699; Name=CN185699; organism=Citrus sinensis; type=EST; length=737bp
ATCTTGCAGAGTTTCATTTCATCCATTATAATCAAAATAGACCATTGCGT
TCCAGCAGCCTAAACTCATTTAACCTTTTCGGCTTTATGGCAGAAACATT
GAAGCTTTTGACAAATCATATGGCGAATCGTCAAATACATATGTAAACCA
ACATCAGCATAAATTAGACAGCAAACTGATAGACTTTAAACGGGGGGAGG
ATCTAACTGTAAAGATCATCGTCATCTGCGCCACCTGCAGAAGACGCAAA
AGGATCTGATCCGCCATCAGCACCAGGGGGAGCAGCATCAGGAAACCTAA
ATTCACTTCCAAACCCTCTTGACTGCTGCAATGTTTGAGCAAATGCTTGG
TATTTGCGTATGTCAGCATCACTGACACTTCTACGAGCATACTTCATTGA
TTCCGCGGAGGGCACAGCTTTAATCTCAGCCACTTCATCCTCTACATCCT
CCTCCATTGCCTCTGGGTTCTCACTTCTCCTCCTCTCCCTCTCAATATCT
TTCTCGATATTCTCTCGGATGGCATATTTGCAAGCCCGCTGGCATATTTC
AGTAATATCTGCACCACTAAAGCCTTGGGTGTACTTAGCAAGAGCTCTGA
GGTCAACATCTTTGGACACCGGTGATTTCCTCAAGCAAGCCTTGAAAATT
TGAAGGCGAGATTCCTCATCAGGGAGAGGGATATAAATCAACTGGTCAAG
ACGGCCTGGACGGAGAAGGGCAGGATCTATGATATCT
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