CN185699

Overview
NameCN185699
Unique NameCN185699
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length737
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9249 contig Csv1_Contig9249:509..1245. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: PSMR_PYRKO (Proteasome-activating nucleotidase OS=Pyrococcus kodakaraensis GN=pan PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.050e-14
Identity = 41/75 (54.67%), Postives = 53/75 (70.67%), Query Frame = -2
Query:  512 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRE 736
            DI+DPALLRPGR D+LI +PLPD + RL+I K   RK  + K VDLR +A+ T+G SGAD+  I   A  +AIR+
Sbjct:  288 DILDPALLRPGRFDRLIEVPLPDYQGRLEILKVHTRKMNL-KGVDLRVIAEITEGASGADLKAIATEAGMFAIRD 361          
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: PSMR_PYRFU (Proteasome-activating nucleotidase OS=Pyrococcus furiosus GN=pan PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.983e-14
Identity = 41/75 (54.67%), Postives = 53/75 (70.67%), Query Frame = -2
Query:  512 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRE 736
            DI+DPALLRPGR D+LI +PLPD E RL+I K   R+  + + VDLR +A+ T+G SGAD+  I   A  +AIRE
Sbjct:  287 DILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKL-RGVDLRLIAELTEGASGADLKAIATEAGMFAIRE 360          
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: FTSH_BUCAI (Cell division protease ftsH OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=ftsH PE=3 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 3.983e-14
Identity = 40/91 (43.96%), Postives = 57/91 (62.64%), Query Frame = -2
Query:  470 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIR--ENIEKDIERERRRSE 736
            D++DPALLRPGR D+ + + LPD   R QI K  +RK P+SKDVD   +A+ T GFSGAD+  +   A  +A R  + +   +E ER + +
Sbjct:  301 DVLDPALLRPGRFDRQVIVALPDIRGREQILKVHMRKVPLSKDVDPMIIARGTPGFSGADLANLVNEAALFAARLDKRVVSMLEFERAKDK 391          
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: SPAT5_MOUSE (Spermatogenesis-associated protein 5 OS=Mus musculus GN=Spata5 PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 5.202e-14
Identity = 37/85 (43.53%), Postives = 53/85 (62.35%), Query Frame = -2
Query:  482 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERER 736
            D ID AL+RPGR+D++IY+PLPD  +R +I        P+S +VDL  L   T  +SGA+I  +C+ A   A+ ENI+ D   +R
Sbjct:  776 DRIDKALMRPGRIDRIIYVPLPDAATRREILNLQFHSMPISNEVDLDELVLQTDTYSGAEIIAVCKEAALLALEENIKADCIMKR 860          
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: FTSH_BUCAP (Cell division protease ftsH OS=Buchnera aphidicola subsp. Schizaphis graminum GN=ftsH PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.202e-14
Identity = 37/76 (48.68%), Postives = 50/76 (65.79%), Query Frame = -2
Query:  509 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIREN 736
            D++DPALLRPGR D+ + + LPD   R QI K  +RK P+S+DVD   +A+ T GFSGAD+  +   A  +A R N
Sbjct:  301 DVLDPALLRPGRFDRQVIVALPDVRGRKQILKVHMRKVPLSEDVDPMIIARGTPGFSGADLANLVNEAALFAARFN 376          
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: SAV_SULAC (Protein SAV OS=Sulfolobus acidocaldarius GN=sav PE=3 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 8.873e-14
Identity = 41/144 (28.47%), Postives = 79/144 (54.86%), Query Frame = -2
Query:  320 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRSEN-----PXXXXXXXXXXXXEIKAVPSAESMKYARRSVSDADIRKYQAFAQTLQQS 736
            DI+DPALLRPGR D+LIY+P PD+ +R +I K   +  P+++DV L  +A+  +G++GAD+  + + A   A+R       ++ R   +                   ++      +++   + S++ ADI++Y+ F++ L+++
Sbjct:  635 DILDPALLRPGRFDRLIYVPPPDKTARFEILKVHTKNVPLAEDVSLEDIAEKAEGYTGADLEALVREATINAMRSIYSMCDKQSRDECKGNMECYQKHIKECMNKTSFKVSKEDFEKALNVVKASLTQADIQRYERFSKELKRA 778          

HSP 2 Score: 69.3218 bits (168), Expect = 2.416e-11
Identity = 34/79 (43.04%), Postives = 49/79 (62.03%), Query Frame = -2
Query:  500 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEK 736
            D IDPAL RPGR D+ I I  PD + R  I +   R  P++ DVDL  LA+ T G++GAD+  + + A  YA+R  +++
Sbjct:  359 DAIDPALRRPGRFDREIEIRPPDTKGRKDILQVHTRNMPITDDVDLDKLAEMTYGYTGADLAALAKEAAIYALRRFVDE 437          
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: PSMR_UNCMA (Proteasome-activating nucleotidase OS=Uncultured methanogenic archaeon RC-I GN=pan PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.159e-13
Identity = 39/76 (51.32%), Postives = 51/76 (67.11%), Query Frame = -2
Query:  509 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIREN 736
            DI+DPALLRPGR D++I +P+P  E+R QI K   RK  ++ DVDLR +A  T   SGAD++ I   A  +AIR N
Sbjct:  309 DILDPALLRPGRFDRMIKVPMPTAEAREQILKIHARKMNLADDVDLRKIALITDESSGADLSAIVMEAGMFAIRNN 384          
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: PSMR_METVS (Proteasome-activating nucleotidase OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=pan PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.159e-13
Identity = 40/78 (51.28%), Postives = 51/78 (65.38%), Query Frame = -2
Query:  503 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIE 736
            DI+DPA+LRPGR D++I I  PDE+ RL+IFK    K  + K VDLR +AK  +   GADI  +C  A  +AIRE  E
Sbjct:  298 DILDPAILRPGRFDRIIEIAAPDEDGRLEIFKIHTDKMNI-KSVDLREIAKMAENMVGADIKAVCTEAGMFAIREGRE 374          
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: PSMR_AERPE (Proteasome-activating nucleotidase OS=Aeropyrum pernix GN=pan PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.159e-13
Identity = 38/74 (51.35%), Postives = 51/74 (68.92%), Query Frame = -2
Query:  515 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIR 736
            D+IDPA+LRPGR D++I +PLP    RL+I     RK+ ++ DVDL A+AK T+GFSGAD+  +   A   AIR
Sbjct:  289 DLIDPAVLRPGRFDRIIEVPLPSLRGRLEILGIHTRKAKMAPDVDLEAIAKLTEGFSGADLKAVVVEAGYNAIR 362          
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: AFG2_SCHPO (ATPase family gene 2 protein OS=Schizosaccharomyces pombe GN=afg2 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.159e-13
Identity = 37/78 (47.44%), Postives = 55/78 (70.51%), Query Frame = -2
Query:  503 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIE 736
            D+IDPAL+RPGRLD+L+Y+  P+ E+R QI K    K   ++DVDL  +A+ T+G SGA++  +CQ A   A+ E++E
Sbjct:  693 DMIDPALMRPGRLDRLLYVGPPNFEARKQIVKIQAEKMKFAEDVDLDLIAEKTEGCSGAEVVALCQEAGLIAMHEDLE 770          
The following BLAST results are available for this feature:
BLAST of CN185699 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
PSMR_PYRKO3.050e-1454.67Proteasome-activating nucleotidase OS=Pyrococcus k... [more]
PSMR_PYRFU3.983e-1454.67Proteasome-activating nucleotidase OS=Pyrococcus f... [more]
FTSH_BUCAI3.983e-1443.96Cell division protease ftsH OS=Buchnera aphidicola... [more]
SPAT5_MOUSE5.202e-1443.53Spermatogenesis-associated protein 5 OS=Mus muscul... [more]
FTSH_BUCAP5.202e-1448.68Cell division protease ftsH OS=Buchnera aphidicola... [more]
SAV_SULAC8.873e-1428.47Protein SAV OS=Sulfolobus acidocaldarius GN=sav PE... [more]
PSMR_UNCMA1.159e-1351.32Proteasome-activating nucleotidase OS=Uncultured m... [more]
PSMR_METVS1.159e-1351.28Proteasome-activating nucleotidase OS=Methanococcu... [more]
PSMR_AERPE1.159e-1351.35Proteasome-activating nucleotidase OS=Aeropyrum pe... [more]
AFG2_SCHPO1.159e-1347.44ATPase family gene 2 protein OS=Schizosaccharomyce... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001L22_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001L22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185699 ID=CN185699; Name=CN185699; organism=Citrus sinensis; type=EST; length=737bp
ATCTTGCAGAGTTTCATTTCATCCATTATAATCAAAATAGACCATTGCGT
TCCAGCAGCCTAAACTCATTTAACCTTTTCGGCTTTATGGCAGAAACATT
GAAGCTTTTGACAAATCATATGGCGAATCGTCAAATACATATGTAAACCA
ACATCAGCATAAATTAGACAGCAAACTGATAGACTTTAAACGGGGGGAGG
ATCTAACTGTAAAGATCATCGTCATCTGCGCCACCTGCAGAAGACGCAAA
AGGATCTGATCCGCCATCAGCACCAGGGGGAGCAGCATCAGGAAACCTAA
ATTCACTTCCAAACCCTCTTGACTGCTGCAATGTTTGAGCAAATGCTTGG
TATTTGCGTATGTCAGCATCACTGACACTTCTACGAGCATACTTCATTGA
TTCCGCGGAGGGCACAGCTTTAATCTCAGCCACTTCATCCTCTACATCCT
CCTCCATTGCCTCTGGGTTCTCACTTCTCCTCCTCTCCCTCTCAATATCT
TTCTCGATATTCTCTCGGATGGCATATTTGCAAGCCCGCTGGCATATTTC
AGTAATATCTGCACCACTAAAGCCTTGGGTGTACTTAGCAAGAGCTCTGA
GGTCAACATCTTTGGACACCGGTGATTTCCTCAAGCAAGCCTTGAAAATT
TGAAGGCGAGATTCCTCATCAGGGAGAGGGATATAAATCAACTGGTCAAG
ACGGCCTGGACGGAGAAGGGCAGGATCTATGATATCT
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