CN185699
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: PRS10_DICDI (26S protease regulatory subunit S10B OS=Dictyostelium discoideum GN=psmC6 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.673e-12 Identity = 36/84 (42.86%), Postives = 50/84 (59.52%), Query Frame = -2 Query: 485 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERE 736 D++DPALLRPGRLD+ I IPLP+E R+ + K DVD A+AK GF+ AD+ +C A +AIR + +E + Sbjct: 287 DVLDPALLRPGRLDRKIEIPLPNEAGRVDVLKIHAANITKHGDVDYEAIAKLADGFNAADLRNVCTEAGMFAIRAERDYVMEED 370
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: PRS6B_SOLTU (26S protease regulatory subunit 6B homolog OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.185e-12 Identity = 38/90 (42.22%), Postives = 51/90 (56.67%), Query Frame = -2 Query: 479 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIREN----IEKDIERERR 736 D +DPALLRPGRLD+ I PLPD + +F+ C K + +VDL S A+IT ICQ A +A+R+N + KD E+ R Sbjct: 310 DTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDLEDYVSRPDKISAAEITAICQEAGMHAVRKNRYVILPKDFEKGYR 399
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: PRS6B_MANSE (26S protease regulatory subunit 6B OS=Manduca sexta PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.185e-12 Identity = 40/87 (45.98%), Postives = 49/87 (56.32%), Query Frame = -2 Query: 488 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIREN----IEKDIER 736 D +DPALLRPGRLD+ I PLPD + IF K +S++VDL SGADI ICQ A A+REN + KD E+ Sbjct: 312 DTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITAKMNLSEEVDLEEFVARPDRVSGADINAICQEAGMNAVRENRYIVLPKDFEK 398
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: PRS6B_CAEEL (Probable 26S protease regulatory subunit 6B OS=Caenorhabditis elegans GN=rpt-3 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.185e-12 Identity = 39/87 (44.83%), Postives = 49/87 (56.32%), Query Frame = -2 Query: 488 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIREN----IEKDIER 736 D +DPALLRPGRLD+ I PLPD + +F + +S DVDL SGADI ICQ A A+REN + KD+E+ Sbjct: 311 DTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTVCSRMNLSDDVDLEDWVARPDKISGADINSICQEAGMQAVRENRYVVLTKDLEK 397
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: FTSHB_ARATH (Cell division protease ftsH homolog 11, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=FTSH11 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.185e-12 Identity = 36/79 (45.57%), Postives = 51/79 (64.56%), Query Frame = -2 Query: 500 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEK 736 DI+DPAL RPGR D+ I +P PD R +I + L+ P+S+DVD++A+A+ T GF+GAD+ + A A E EK Sbjct: 507 DILDPALTRPGRFDRHIVVPSPDVRGREEILELYLQGKPMSEDVDVKAIARGTPGFNGADLANLVNIAAIKAAVEGAEK 585
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: YB7A_SCHPO (Uncharacterized AAA domain-containing protein C16E9.10c OS=Schizosaccharomyces pombe GN=SPBC16E9.10c PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.854e-12 Identity = 44/136 (32.35%), Postives = 69/136 (50.74%), Query Frame = -2 Query: 335 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAK--YTQGFSGADITEICQRACKYAIRENIEKDIERERRRSENPXXXXXXXXXXXXEIKAVPSAESMKYARRSVSDADIRKYQAFAQ 736 DIIDPA+LRPGRLD+ + + LPD R++I K +++P+ ++V+L L + FSGAD+ + + A A+R + DI + N + + K + SVSD D +KYQ A+ Sbjct: 639 DIIDPAMLRPGRLDKTLLVDLPDAHERVEILKTLTKQTPLHEEVNLDVLGRDERCSNFSGADLAALVREAAVTALRSAVFADI------ASNEPEITQHSALEPIRVTNADFELAFKNIKPSVSDRDRQKYQRLAK 768
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: PRS8_XENLA (26S protease regulatory subunit 8 OS=Xenopus laevis GN=psmc5 PE=2 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 2.854e-12 Identity = 35/75 (46.67%), Postives = 51/75 (68.00%), Query Frame = -2 Query: 512 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRE 736 DI+D ALLRPGR+D+ I P P+EE+RL I K RK +++ ++LR +A+ G SGA++ +C A YA+RE Sbjct: 293 DILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRE 367
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: PRS8_RAT (26S protease regulatory subunit 8 OS=Rattus norvegicus GN=Psmc5 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.854e-12 Identity = 35/75 (46.67%), Postives = 51/75 (68.00%), Query Frame = -2 Query: 512 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRE 736 DI+D ALLRPGR+D+ I P P+EE+RL I K RK +++ ++LR +A+ G SGA++ +C A YA+RE Sbjct: 299 DILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRE 373
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: PRS8_PIG (26S protease regulatory subunit 8 OS=Sus scrofa GN=PSMC5 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.854e-12 Identity = 35/75 (46.67%), Postives = 51/75 (68.00%), Query Frame = -2 Query: 512 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRE 736 DI+D ALLRPGR+D+ I P P+EE+RL I K RK +++ ++LR +A+ G SGA++ +C A YA+RE Sbjct: 299 DILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRE 373
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: PRS8_MOUSE (26S protease regulatory subunit 8 OS=Mus musculus GN=Psmc5 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.854e-12 Identity = 35/75 (46.67%), Postives = 51/75 (68.00%), Query Frame = -2 Query: 512 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRE 736 DI+D ALLRPGR+D+ I P P+EE+RL I K RK +++ ++LR +A+ G SGA++ +C A YA+RE Sbjct: 299 DILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRE 373 The following BLAST results are available for this feature:
BLAST of CN185699 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 142
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185699 ID=CN185699; Name=CN185699; organism=Citrus sinensis; type=EST; length=737bpback to top |