CN185699
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: PRS8_HUMAN (26S protease regulatory subunit 8 OS=Homo sapiens GN=PSMC5 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.854e-12 Identity = 35/75 (46.67%), Postives = 51/75 (68.00%), Query Frame = -2 Query: 512 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRE 736 DI+D ALLRPGR+D+ I P P+EE+RL I K RK +++ ++LR +A+ G SGA++ +C A YA+RE Sbjct: 299 DILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRE 373
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: PRS8_BOVIN (26S protease regulatory subunit 8 OS=Bos taurus GN=PSMC5 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.854e-12 Identity = 35/75 (46.67%), Postives = 51/75 (68.00%), Query Frame = -2 Query: 512 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRE 736 DI+D ALLRPGR+D+ I P P+EE+RL I K RK +++ ++LR +A+ G SGA++ +C A YA+RE Sbjct: 299 DILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRE 373
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: PRS6B_ARATH (26S protease regulatory subunit 6B homolog OS=Arabidopsis thaliana GN=RPT3 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.854e-12 Identity = 38/90 (42.22%), Postives = 51/90 (56.67%), Query Frame = -2 Query: 479 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIREN----IEKDIERERR 736 D +DPALLRPGRLD+ I PLPD + +F+ C K +S +VDL S A+I ICQ A +A+R+N + KD E+ R Sbjct: 305 DTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTSKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYR 394
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: FTSH_BUCBP (Cell division protease ftsH OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=ftsH PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.854e-12 Identity = 33/76 (43.42%), Postives = 49/76 (64.47%), Query Frame = -2 Query: 509 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIREN 736 D++DPALLRPGR D+ I++ LPD R +I + ++K P+ +VD +A+ T GFSGAD+ + A +A R N Sbjct: 301 DVLDPALLRPGRFDRQIFVALPDIRGREKIIQVHMKKVPLGNNVDPMIIARGTPGFSGADLANLVNEAALFAARNN 376
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: FTSH9_ORYSJ (Cell division protease ftsH homolog 9, chloroplastic/mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH9 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.854e-12 Identity = 36/79 (45.57%), Postives = 49/79 (62.03%), Query Frame = -2 Query: 500 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEK 736 DI+DPAL RPGR D+ I +P PD R +I + L+ PVS DVD+ A+A+ T GF+GAD+ + A A E +K Sbjct: 473 DILDPALTRPGRFDRHIVVPNPDVRGRQEILELYLQDKPVSSDVDVNAIARSTPGFNGADLANLVNIAAIKAAVEGADK 551
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: PRS8_ENCCU (26S protease regulatory subunit 8 homolog OS=Encephalitozoon cuniculi GN=RPT6 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.728e-12 Identity = 35/75 (46.67%), Postives = 49/75 (65.33%), Query Frame = -2 Query: 512 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRE 736 DI+DPALLR GR+D+ I P P+E +RL+I K RK ++K +DL +A G SGA++ +C A YA+RE Sbjct: 346 DILDPALLRTGRIDRKIEFPPPNESARLEILKIHSRKMNLTKGIDLETIASKMVGCSGAEVKAVCTEAGMYALRE 420
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: PRS6B_RAT (26S protease regulatory subunit 6B OS=Rattus norvegicus GN=Psmc4 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.728e-12 Identity = 39/87 (44.83%), Postives = 49/87 (56.32%), Query Frame = -2 Query: 488 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIREN----IEKDIER 736 D +DPALLRPGRLD+ I PLPD + IF K +S++VDL SGADI ICQ + A+REN + KD E+ Sbjct: 315 DTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEK 401
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: PRS6B_MACFA (26S protease regulatory subunit 6B OS=Macaca fascicularis GN=PSMC4 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.728e-12 Identity = 39/87 (44.83%), Postives = 49/87 (56.32%), Query Frame = -2 Query: 488 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIREN----IEKDIER 736 D +DPALLRPGRLD+ I PLPD + IF K +S++VDL SGADI ICQ + A+REN + KD E+ Sbjct: 315 DTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEK 401
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: PRS6B_HUMAN (26S protease regulatory subunit 6B OS=Homo sapiens GN=PSMC4 PE=1 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 3.728e-12 Identity = 39/87 (44.83%), Postives = 49/87 (56.32%), Query Frame = -2 Query: 488 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIREN----IEKDIER 736 D +DPALLRPGRLD+ I PLPD + IF K +S++VDL SGADI ICQ + A+REN + KD E+ Sbjct: 315 DTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEK 401
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: PRS6B_BOVIN (26S protease regulatory subunit 6B OS=Bos taurus GN=PSMC4 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.728e-12 Identity = 39/87 (44.83%), Postives = 49/87 (56.32%), Query Frame = -2 Query: 488 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIREN----IEKDIER 736 D +DPALLRPGRLD+ I PLPD + IF K +S++VDL SGADI ICQ + A+REN + KD E+ Sbjct: 315 DTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEK 401 The following BLAST results are available for this feature:
BLAST of CN185699 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 142
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185699 ID=CN185699; Name=CN185699; organism=Citrus sinensis; type=EST; length=737bpback to top |