CN185693

Overview
NameCN185693
Unique NameCN185693
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length701
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CN185693_ssr26 microsatellite CN185693_ssr26:26..37. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig2499 contig Csv1_Contig2499:1..701. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185693 vs. ExPASy Swiss-Prot
Match: FABD_SYNY3 (Malonyl CoA-acyl carrier protein transacylase OS=Synechocystis sp. (strain PCC 6803) GN=fabD PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.877e-18
Identity = 60/139 (43.17%), Postives = 81/139 (58.27%), Query Frame = 2
Query:  284 AFLFPGQGAQAVGMGKEAQSVPAAAELYKKANDILGFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGKAMQEAADAAKGAMVSIIGLD 700
            A++FPGQG+QAVGMG +  S   A E Y++A +ILG+ ++E C  G +  L  T  +QP +YV      +LL  RD G Q     D   G SLGEY+AL  AG F F  GL+LVK R + M   A A+ G M +++  D
Sbjct:    4 AWVFPGQGSQAVGMGVDLLSTAIAKEKYQQAEEILGWSVVEKC-QGDEASLALTQNTQPCLYVIEAILADLL--RDKGFQ----PDYVAGHSLGEYSALYAAGVFDFATGLQLVKQRSEVM---ASASGGMMAALMKFD 132          
BLAST of CN185693 vs. ExPASy Swiss-Prot
Match: FENF_BACSU (Malonyl CoA-acyl carrier protein transacylase OS=Bacillus subtilis GN=fenF PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.711e-17
Identity = 53/136 (38.97%), Postives = 77/136 (56.62%), Query Frame = 2
Query:  284 AFLFPGQGAQAVGMGKEA-QSVPAAAELYKKANDILGFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGKAMQEAADAAKGAMVSI 688
            AFLFPGQG+Q VGMGK        A  L+++A+D +  D+ ++C +G   +L  T+ +QPAI   S+ A ++       Q+I        G SLGEY+AL  AG  SF++ +KL++ RG  MQ A     G M +I
Sbjct:    5 AFLFPGQGSQFVGMGKSFWNDFVLAKRLFEEASDAISMDVKKLCFDGDMTELTRTMNAQPAILTVSVIAYQVYM-----QEIGIKPHFLAGHSLGEYSALVCAGVLSFQEAVKLIRQRGILMQNADPEQLGTMAAI 135          
BLAST of CN185693 vs. ExPASy Swiss-Prot
Match: FABD_STAAR (Malonyl CoA-acyl carrier protein transacylase OS=Staphylococcus aureus (strain MRSA252) GN=fabD PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.345e-16
Identity = 53/140 (37.86%), Postives = 78/140 (55.71%), Query Frame = 2
Query:  284 AFLFPGQGAQAVGMGKEA-QSVPAAAELYKKANDILGFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGKAMQEAADAAKGAMVSIIGLD 700
            A +FPGQGAQ VGM ++   +   A E+   A + L FD+LE      + KL  T  +QPA+   S A +  L+  +         D T G SLGEY++L  A   SFED +K+V+ RG+ M +A  +  G+M +++GLD
Sbjct:    5 AIIFPGQGAQKVGMAQDLYNNNDQATEILTSAANTLDFDILETMFTDEEGKLGETENTQPALLTHSSALLAALKNLNP--------DFTMGHSLGEYSSLVAADVLSFEDAVKIVRKRGQLMAQAFPSGVGSMAAVLGLD 136          
BLAST of CN185693 vs. ExPASy Swiss-Prot
Match: FABD_STAAU (Malonyl-CoA-acyl carrier protein transacylase OS=Staphylococcus aureus GN=fabD PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.757e-16
Identity = 53/140 (37.86%), Postives = 77/140 (55.00%), Query Frame = 2
Query:  284 AFLFPGQGAQAVGMGKEA-QSVPAAAELYKKANDILGFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGKAMQEAADAAKGAMVSIIGLD 700
            A +FPGQGAQ VGM ++   +   A E+   A + L FD+LE      + KL  T  +QPA+   S A +  L+  +         D T G SLGEY++L  A   SFED +K+V+ RG+ M +A     G+M +++GLD
Sbjct:    5 AIIFPGQGAQKVGMAQDLFNNNDQATEILTSAANTLDFDILETMFTDEEGKLGETENTQPALLTHSSALLAALKNLNP--------DFTMGHSLGEYSSLVAADVLSFEDAVKIVRKRGQLMAQAFPTGVGSMAAVLGLD 136          
BLAST of CN185693 vs. ExPASy Swiss-Prot
Match: FABD_STAAC (Malonyl CoA-acyl carrier protein transacylase OS=Staphylococcus aureus (strain COL) GN=fabD PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.757e-16
Identity = 53/140 (37.86%), Postives = 77/140 (55.00%), Query Frame = 2
Query:  284 AFLFPGQGAQAVGMGKEA-QSVPAAAELYKKANDILGFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGKAMQEAADAAKGAMVSIIGLD 700
            A +FPGQGAQ VGM ++   +   A E+   A + L FD+LE      + KL  T  +QPA+   S A +  L+  +         D T G SLGEY++L  A   SFED +K+V+ RG+ M +A     G+M +++GLD
Sbjct:    5 AIIFPGQGAQKVGMAQDLFNNNDQATEILTSAANTLDFDILETMFTDEEGKLGETENTQPALLTHSSALLAALKNLNP--------DFTMGHSLGEYSSLVAADVLSFEDAVKIVRKRGQLMAQAFPTGVGSMAAVLGLD 136          
BLAST of CN185693 vs. ExPASy Swiss-Prot
Match: FABD_STAAW (Malonyl CoA-acyl carrier protein transacylase OS=Staphylococcus aureus (strain MW2) GN=fabD PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.997e-16
Identity = 53/140 (37.86%), Postives = 76/140 (54.29%), Query Frame = 2
Query:  284 AFLFPGQGAQAVGMGKEA-QSVPAAAELYKKANDILGFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGKAMQEAADAAKGAMVSIIGLD 700
            A +FPGQGAQ VGM ++   +   A E+   A   L FD+LE      + KL  T  +QPA+   S A +  L+  +         D T G SLGEY++L  A   SFED +K+V+ RG+ M +A     G+M +++GLD
Sbjct:    5 AIIFPGQGAQKVGMAQDLFNNNDQATEILTSAAKTLDFDILETMFTDEEGKLGETENTQPALLTHSSALLAALKNLNP--------DFTMGHSLGEYSSLVAADVLSFEDAVKIVRKRGQLMAQAFPTGVGSMAAVLGLD 136          
BLAST of CN185693 vs. ExPASy Swiss-Prot
Match: FABD_STAAS (Malonyl CoA-acyl carrier protein transacylase OS=Staphylococcus aureus (strain MSSA476) GN=fabD PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.997e-16
Identity = 53/140 (37.86%), Postives = 76/140 (54.29%), Query Frame = 2
Query:  284 AFLFPGQGAQAVGMGKEA-QSVPAAAELYKKANDILGFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGKAMQEAADAAKGAMVSIIGLD 700
            A +FPGQGAQ VGM ++   +   A E+   A   L FD+LE      + KL  T  +QPA+   S A +  L+  +         D T G SLGEY++L  A   SFED +K+V+ RG+ M +A     G+M +++GLD
Sbjct:    5 AIIFPGQGAQKVGMAQDLFNNNDQATEILTSAAKTLDFDILETMFTDEEGKLGETENTQPALLTHSSALLAALKNLNP--------DFTMGHSLGEYSSLVAADVLSFEDAVKIVRKRGQLMAQAFPTGVGSMAAVLGLD 136          
BLAST of CN185693 vs. ExPASy Swiss-Prot
Match: FABD_STAAN (Malonyl CoA-acyl carrier protein transacylase OS=Staphylococcus aureus (strain N315) GN=fabD PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.997e-16
Identity = 53/140 (37.86%), Postives = 76/140 (54.29%), Query Frame = 2
Query:  284 AFLFPGQGAQAVGMGKEA-QSVPAAAELYKKANDILGFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGKAMQEAADAAKGAMVSIIGLD 700
            A +FPGQGAQ VGM ++   +   A E+   A   L FD+LE      + KL  T  +QPA+   S A +  L+  +         D T G SLGEY++L  A   SFED +K+V+ RG+ M +A     G+M +++GLD
Sbjct:    5 AIIFPGQGAQKVGMAQDLFNNNDQATEILTSAAKTLDFDILETMFTDEEGKLGETENTQPALLTHSSALLAALKNLNP--------DFTMGHSLGEYSSLVAADVLSFEDAVKIVRKRGQLMAQAFPTGVGSMAAVLGLD 136          
BLAST of CN185693 vs. ExPASy Swiss-Prot
Match: FABD_STAAM (Malonyl CoA-acyl carrier protein transacylase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=fabD PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.997e-16
Identity = 53/140 (37.86%), Postives = 76/140 (54.29%), Query Frame = 2
Query:  284 AFLFPGQGAQAVGMGKEA-QSVPAAAELYKKANDILGFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGKAMQEAADAAKGAMVSIIGLD 700
            A +FPGQGAQ VGM ++   +   A E+   A   L FD+LE      + KL  T  +QPA+   S A +  L+  +         D T G SLGEY++L  A   SFED +K+V+ RG+ M +A     G+M +++GLD
Sbjct:    5 AIIFPGQGAQKVGMAQDLFNNNDQATEILTSAAKTLDFDILETMFTDEEGKLGETENTQPALLTHSSALLAALKNLNP--------DFTMGHSLGEYSSLVAADVLSFEDAVKIVRKRGQLMAQAFPTGVGSMAAVLGLD 136          
BLAST of CN185693 vs. ExPASy Swiss-Prot
Match: BAEC_BACA2 (Polyketide biosynthesis malonyl CoA-acyl carrier protein transacylase baeC OS=Bacillus amyloliquefaciens (strain FZB42) GN=baeC PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.139e-15
Identity = 52/137 (37.96%), Postives = 76/137 (55.47%), Query Frame = 2
Query:  287 FLFPGQGAQAVGMGKEAQSVPAAAELYKKANDILGFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGKAMQEAADAAKGAMVSIIGL 697
            +LFPGQG+Q  GMG          +L ++A++ LG+ +  +C   P   L  T  +QPA+YV ++ +  L + +D   +     D   G SLGEY AL  AGAF F  GL+LV+ RG+ M  A D   G M +++GL
Sbjct:    4 YLFPGQGSQKQGMGSSL--FDEFKDLTEQADETLGYSMKRLCLENPYSNLHKTQFTQPALYVVNVLSY-LKKIQDNDIK----PDYVAGHSLGEYNALFAAGAFDFITGLQLVRKRGELMSMATD---GKMAAVMGL 130          
The following BLAST results are available for this feature:
BLAST of CN185693 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
FABD_SYNY31.877e-1843.17Malonyl CoA-acyl carrier protein transacylase OS=S... [more]
FENF_BACSU2.711e-1738.97Malonyl CoA-acyl carrier protein transacylase OS=B... [more]
FABD_STAAR1.345e-1637.86Malonyl CoA-acyl carrier protein transacylase OS=S... [more]
FABD_STAAU1.757e-1637.86Malonyl-CoA-acyl carrier protein transacylase OS=S... [more]
FABD_STAAC1.757e-1637.86Malonyl CoA-acyl carrier protein transacylase OS=S... [more]
FABD_STAAW2.997e-1637.86Malonyl CoA-acyl carrier protein transacylase OS=S... [more]
FABD_STAAS2.997e-1637.86Malonyl CoA-acyl carrier protein transacylase OS=S... [more]
FABD_STAAN2.997e-1637.86Malonyl CoA-acyl carrier protein transacylase OS=S... [more]
FABD_STAAM2.997e-1637.86Malonyl CoA-acyl carrier protein transacylase OS=S... [more]
BAEC_BACA21.139e-1537.96Polyketide biosynthesis malonyl CoA-acyl carrier p... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001L18_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001L18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185693 ID=CN185693; Name=CN185693; organism=Citrus sinensis; type=EST; length=701bp
ATGCCTACGCGTCCCCTCTCCTTCATCTTCTTCTTCTTCCCATTACATTT
TTTACACACATCCTCTAATGGCCACCACCACCTCTCTCGCTTTCTCCTCC
AGTTCACTCCACAACCGCTACCACAAGCGCACCACCTTTTTTAATGGGTC
TGCTGCTTCTTTCAACAGAATTGGAGTTCGAAGAAGCCTTGCCCGATCTG
GGGTTTTTATGAGCGTGTCTGTTGGCAAACACACTGCTGTAACTGTTGAT
GATGCCCTGTTTGCGGATTACAAGCCCACCAATGCTTTCTTGTTTCCTGG
TCAGGGTGCACAAGCAGTTGGAATGGGGAAGGAGGCTCAGAGCGTACCAG
CTGCCGCAGAGCTATACAAGAAAGCAAATGATATATTAGGTTTTGATTTG
CTAGAAATTTGCACCAATGGACCAAAAGAGAAGCTAGATTCAACTATTAT
CAGCCAGCCTGCCATCTATGTCACAAGTTTAGCGGCAGTTGAACTACTCC
GAGCTCGTGATGGAGGCCAGCAGATAATTGATTCTGTTGATGTCACTTGT
GGTCTGAGTTTAGGTGAATATACTGCTTTAGCCTTTGCTGGAGCTTTCAG
CTTTGAGGATGGACTGAAGCTGGTCAAACTAAGGGGAAAAGCTATGCAGG
AAGCTGCTGATGCTGCTAAAGGTGCCATGGTCAGCATTATTGGATTGGAT
T
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