CN185677
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185677 vs. ExPASy Swiss-Prot
Match: SPEE1_BACCR (Spermidine synthase 1 OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=speE1 PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 9.417e-15 Identity = 49/134 (36.57%), Postives = 75/134 (55.97%), Query Frame = -1 Query: 201 KYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMGLHTHLIEDMISICRETFKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAAFALPAFL 602 +YD I+VDS++PVGPA L K F+ I+KAL+ G+ ++ LI + +E F + Y A++PTYPSG+ F I S + +P+E +E H+ E ++Y E+H+AAFALP F+ Sbjct: 148 EYDVIMVDSTEPVGPAVNLFTKGFYAGISKALKEDGIFVAQTDNPWFTPELITTVFKDVKEIFPITRLYT-ANIPTYPSGLWTFTIGSKKH---------DPLEVIE-ERFHEIETKYYTKELHNAAFALPKFV 270
BLAST of CN185677 vs. ExPASy Swiss-Prot
Match: SPEE_BACCN (Spermidine synthase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=speE PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.098e-14 Identity = 48/134 (35.82%), Postives = 74/134 (55.22%), Query Frame = -1 Query: 201 KYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMGLHTHLIEDMISICRETFKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAAFALPAFL 602 +YD I+VDS++PVGPA L K F+ I+KAL+ G+ ++ LI +++ +E F + Y A++PTYPSG+ F I S + +P+E E H E ++Y E+H A+FALP F+ Sbjct: 148 EYDVIMVDSTEPVGPAVNLFTKGFYAGISKALKEDGIFVAQTDNPWFTPELITNVVKDVKEIFPITRLYT-ANIPTYPSGLWTFTIGSKK---------YDPLEVSEDR-FHDIETKYYTKELHKASFALPKFV 270
BLAST of CN185677 vs. ExPASy Swiss-Prot
Match: SPEE_BACWK (Spermidine synthase OS=Bacillus weihenstephanensis (strain KBAB4) GN=speE PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.740e-14 Identity = 49/134 (36.57%), Postives = 74/134 (55.22%), Query Frame = -1 Query: 201 KYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMGLHTHLIEDMISICRETFKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAAFALPAFL 602 +YD I+VDS++PVGPA L K F+ I+KAL+ G+ ++ LI + +E F + Y A++PTYPSG+ F I S + +P+E E H+ E ++Y E+H+AAFALP F+ Sbjct: 148 EYDVIMVDSTEPVGPAVNLFTKGFYAGISKALKEDGIFVAQTDNPWFTPELITTVFKDVKEIFPITRLYT-ANIPTYPSGLWTFTIGSKKH---------DPLEVSE-ERFHEIETKYYTKELHNAAFALPKFV 270
BLAST of CN185677 vs. ExPASy Swiss-Prot
Match: SPEE_BACC1 (Spermidine synthase OS=Bacillus cereus (strain ATCC 10987) GN=speE PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.740e-14 Identity = 49/134 (36.57%), Postives = 74/134 (55.22%), Query Frame = -1 Query: 201 KYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMGLHTHLIEDMISICRETFKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAAFALPAFL 602 +YD I+VDS++PVGPA L K F+ I+KAL+ G+ ++ LI + +E F + Y A++PTYPSG+ F I S + +P+E E H+ E ++Y E+H+AAFALP F+ Sbjct: 148 EYDVIMVDSTEPVGPAVNLFTKGFYAGISKALKEDGIFVAQTDNPWFTPELITTVFKDVKEIFPITRLYT-ANIPTYPSGLWTFTIGSKKH---------DPLEVSE-ERFHEIETKYYTKELHNAAFALPKFV 270
BLAST of CN185677 vs. ExPASy Swiss-Prot
Match: SPEE1_BACAN (Spermidine synthase 1 OS=Bacillus anthracis GN=speE1 PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.740e-14 Identity = 49/134 (36.57%), Postives = 74/134 (55.22%), Query Frame = -1 Query: 201 KYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMGLHTHLIEDMISICRETFKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAAFALPAFL 602 +YD I+VDS++PVGPA L K F+ I+KAL+ G+ ++ LI + +E F + Y A++PTYPSG+ F I S + +P+E E H+ E ++Y E+H+AAFALP F+ Sbjct: 148 EYDVIMVDSTEPVGPAVNLFTKGFYAGISKALKEDGIFVAQTDNPWFTPELITTVFKDVKEIFPITRLYT-ANIPTYPSGLWTFTIGSKKH---------DPLEVSE-ERFHEIETKYYTKELHNAAFALPKFV 270
BLAST of CN185677 vs. ExPASy Swiss-Prot
Match: SPEE_METJA (Probable spermidine synthase OS=Methanocaldococcus jannaschii GN=speE PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.360e-13 Identity = 51/143 (35.66%), Postives = 73/143 (51.05%), Query Frame = -1 Query: 189 KYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMGLHTHLIEDMISICRET-FKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKH---KRELRFYNSEIHSAAF-ALPAFLKREV 602 KYD IIVD DPVGPA+ L EK F+ + K L G++ +ES + LI+++ ++ FK + Y + +PTYPSG F + S + NP+E E K E ++Y+ E+H F A P FLK V Sbjct: 156 KYDVIIVDCPDPVGPAKGLFEKEFYKNVFKCLNDDGIMVQQSESPLYNLDLIQNICRYLKDAGFKIIMPYTY-PMPTYPSGFWSFTLASKK---------YNPLEVDEARIKEALKDMETKYYDEEVHKGIFLAAPKFLKDAV 288
BLAST of CN185677 vs. ExPASy Swiss-Prot
Match: SPEE_SYNPX (Spermidine synthase OS=Synechococcus sp. (strain WH8102) GN=speE PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.151e-12 Identity = 44/138 (31.88%), Postives = 65/138 (47.10%), Query Frame = -1 Query: 186 YDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMGLHTHLIEDMISICRETFKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAAFALPAFLKREVS 599 YD ++VD SDP GPA+ L + FF+ + L+PGGV +ES + M+ + RE F G + VP YPSG + + +GP V P EG + + A A+PAF+ RE++ Sbjct: 149 YDVVLVDGSDPAGPAEGLFNRAFFEHCRRILKPGGVFATQSESPEAFREVHVAMVRLLREVF-GHADPLYGWVPMYPSGWWSWTFAAVDGPRYRTVQPARAALVAEGCEIWSPRWQ------QGALDAVPAFIARELA 279
BLAST of CN185677 vs. ExPASy Swiss-Prot
Match: SPEE_BACSU (Spermidine synthase OS=Bacillus subtilis GN=speE PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.151e-12 Identity = 47/134 (35.07%), Postives = 72/134 (53.73%), Query Frame = -1 Query: 201 KYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMGLHTHLIEDMISICRETFKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAAFALPAFL 602 +YD I+VDS++PVGPA L K F+ IAKAL+ G+ ++ LI ++ +E F + Y A++PTYPSG+ F I S + +P+ +E + E ++Y +IH AAF LP F+ Sbjct: 149 QYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDVKEIFPITKLYT-ANIPTYPSGLWTFTIGSKK------YDPL----AVEDSRFFDIETKYYTKDIHKAAFVLPKFV 271
BLAST of CN185677 vs. ExPASy Swiss-Prot
Match: SPEE_HALHL (Spermidine synthase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=speE PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.504e-12 Identity = 47/134 (35.07%), Postives = 66/134 (49.25%), Query Frame = -1 Query: 198 DAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMGLH-THLIEDMISICRETFKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAAFALPAFLK 596 D +IVDS+DPVGPA L K F + AL PGG++ +ES LH +I + E VH VP+YPSG + G +F + +++ E R+YN++IH AA A+P LK Sbjct: 153 DVVIVDSTDPVGPAAGLFTKEFLTDVRSALGPGGIVVQQSESPLLHRDSVIAPLHRAASEAGFDGVHTLTFPVPSYPSGWWSATLMVNGGDPRNF--------READSEEKPFETRYYNADIHRAALAVPELLK 278
BLAST of CN185677 vs. ExPASy Swiss-Prot
Match: SPEE_CALS8 (Spermidine synthase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=speE PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.964e-12 Identity = 44/135 (32.59%), Postives = 71/135 (52.59%), Query Frame = -1 Query: 195 YDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMGLHTHLIEDMISICRETFKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAAFALPAFLKR 599 +D IIVDS+DPVGPA L E F+ + + L+ G+ ES LI ++ + F + Y +PTYPSG+ F + S + +P+E ++ + + + R+YN E+H A FALP F+++ Sbjct: 152 FDVIIVDSTDPVGPAVGLFESNFYQAVYECLKEDGLFVAQTESPFYDQDLIRNVFHSIKSIFPITRLYL-GFIPTYPSGLWSFTMGSKK---------YDPLE-IDTSKIKRIDTRYYNPELHKALFALPTFVQK 275 The following BLAST results are available for this feature:
BLAST of CN185677 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185677 ID=CN185677; Name=CN185677; organism=Citrus sinensis; type=EST; length=602bpback to top |