CN185677
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185677 vs. ExPASy Swiss-Prot
Match: SPEE_ALKMQ (Spermidine synthase OS=Alkaliphilus metalliredigens (strain QYMF) GN=speE PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.349e-12 Identity = 46/142 (32.39%), Postives = 75/142 (52.82%), Query Frame = -1 Query: 189 KYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMGLHTHLIEDMISICRETFK--GSVHYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKREL--RFYNSEIHSAAFALPAFLKREV 602 KYD II+DS+DPVGP + L + F+ KAL G+L N ES ++ + I + K V A +PTYPSG F S ++P++ L+ + ++ L ++YN+++H AFALP+++K ++ Sbjct: 148 KYDLIIIDSTDPVGPGEGLFSQEFYTNCFKALTEQGILVNQNES-PVYEQFAREAIRANSKLKKIFPIVEVYQAQIPTYPSGYWLFGFAS---------KSLHPVKDLKSSVWNQLNLNTKYYNTQLHVGAFALPSYVKEQI 279
BLAST of CN185677 vs. ExPASy Swiss-Prot
Match: SPEE_PROM3 (Spermidine synthase OS=Prochlorococcus marinus (strain MIT 9303) GN=speE PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.713e-12 Identity = 46/139 (33.09%), Postives = 68/139 (48.92%), Query Frame = -1 Query: 186 YDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMGLHTHLIEDMISICRETFKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAAF-ALPAFLKREVS 599 YD I+VD SDP GPA+ L + FF + LRPGGV +ES + D + + R+ F G + VP YPSG + + +GP NP+ A E+ ++ AF A+PAF++RE++ Sbjct: 156 YDVILVDGSDPTGPAEGLFNEAFFKQCRRILRPGGVFATQSESPEAFRQIHIDTVRLIRQVF-GYADPLYGWVPMYPSGWWSWTFAAVDGPRYR-----NPLPARAAAISSGCEI--WSPRWQQGAFEAIPAFIERELT 286
BLAST of CN185677 vs. ExPASy Swiss-Prot
Match: SPEE1_THETN (Spermidine synthase 1 OS=Thermoanaerobacter tengcongensis GN=speE1 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.713e-12 Identity = 45/137 (32.85%), Postives = 72/137 (52.55%), Query Frame = -1 Query: 198 KYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMGLHTHLIEDMISICRETFKGSVHYAWASVPTYPSGIIGFLICST--EGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAAFALPAFLK 602 ++D +IVDS+DP+GPA L F+ + + LR G++ ES ++ LI + + +E + + Y A+VPTYP + F + S + VD IN I ++ + ++Y EIH AAF LP F+K Sbjct: 148 EFDVVIVDSTDPIGPAVGLFTSDFYRAVYECLREDGIIVAQTESPFIYGKLINKISKMFKEIYPITKAYI-ATVPTYPGSLWTFTMGSKKYDPEEVD----INSIPRI--------QTKYYTPEIHKAAFVLPKFVK 271
BLAST of CN185677 vs. ExPASy Swiss-Prot
Match: SPEE_MOOTA (Spermidine synthase OS=Moorella thermoacetica (strain ATCC 39073) GN=speE PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 7.462e-12 Identity = 46/134 (34.33%), Postives = 69/134 (51.49%), Query Frame = -1 Query: 198 YDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMGLHTHLIEDMISICRETFKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAAFALPAFLK 599 YD IIVDS+DP+GPA L F+ + +AL+ GV ES ++ LI + +E F + Y +VPTYP G+ F + S + +P+E ++ K R+Y IH AAF+LP F++ Sbjct: 150 YDVIIVDSTDPIGPAVGLFSAEFYRNVYRALKADGVFVAQTESPIFNSRLIRRIQRDLKEIFPIARLYL-TTVPTYPGGLWAFSLGSKK---------YDPLE-VDWRQAPKVATRYYTPAIHQAAFSLPPFVQ 272
BLAST of CN185677 vs. ExPASy Swiss-Prot
Match: SPEE_THEPX (Spermidine synthase OS=Thermoanaerobacter sp. (strain X514) GN=speE PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 9.746e-12 Identity = 43/137 (31.39%), Postives = 72/137 (52.55%), Query Frame = -1 Query: 198 KYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMGLHTHLIEDMISICRETFKGSVHYAWASVPTYPSGIIGFLICST--EGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAAFALPAFLK 602 ++D +IVDS+DP+GPA L F+ + + L+ G++ ES ++ LI + + +E + + Y A++PTYP + F + S + VD IN I ++ + ++Y EIH AAF LP F+K Sbjct: 148 EFDVVIVDSTDPIGPAVGLFTSDFYKAVYECLKEDGIIVAQTESPFIYGKLINKLSKMFKEIYPITKAYI-ATIPTYPGSLWTFTMGSKKYDPEEVD----INSIPRI--------DTKYYTPEIHKAAFVLPKFVK 271
BLAST of CN185677 vs. ExPASy Swiss-Prot
Match: SPEE_THEP3 (Spermidine synthase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=speE PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 9.746e-12 Identity = 43/137 (31.39%), Postives = 72/137 (52.55%), Query Frame = -1 Query: 198 KYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMGLHTHLIEDMISICRETFKGSVHYAWASVPTYPSGIIGFLICST--EGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAAFALPAFLK 602 ++D +IVDS+DP+GPA L F+ + + L+ G++ ES ++ LI + + +E + + Y A++PTYP + F + S + VD IN I ++ + ++Y EIH AAF LP F+K Sbjct: 148 EFDVVIVDSTDPIGPAVGLFTSDFYKAVYECLKEDGIIVAQTESPFIYGKLINKLSKMFKEIYPITKAYI-ATIPTYPGSLWTFTMGSKKYDPEEVD----INSIPRI--------DTKYYTPEIHKAAFVLPKFVK 271
BLAST of CN185677 vs. ExPASy Swiss-Prot
Match: SPEE_SYNS3 (Spermidine synthase OS=Synechococcus sp. (strain CC9311) GN=speE PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 9.746e-12 Identity = 43/139 (30.94%), Postives = 65/139 (46.76%), Query Frame = -1 Query: 186 YDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMGLHTHLIEDMISICRETFKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAAF-ALPAFLKREVS 599 YD ++VD SDP GPA+ L + FF + L+PGGV +ES + DM+ + RE F G + VP YPSG + + + P V EG+ ++ AF +PAF++RE++ Sbjct: 156 YDVVLVDGSDPTGPAEGLFNRAFFSNCCRILKPGGVFATQSESPEAFRQVHIDMVKLIRELF-GHADPLYGWVPMYPSGWWSWTFAAKDAPRYLTVQSERAAAVAEGS-------AIWSPRWQQGAFNTIPAFIERELN 286
BLAST of CN185677 vs. ExPASy Swiss-Prot
Match: SPEE_PROMM (Spermidine synthase OS=Prochlorococcus marinus (strain MIT 9313) GN=speE PE=3 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 9.746e-12 Identity = 45/139 (32.37%), Postives = 69/139 (49.64%), Query Frame = -1 Query: 186 YDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMGLHTHLIEDMISICRETFKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAAF-ALPAFLKREVS 599 YD I++D SDP GPA+ L + FF+ + LRPGGV +ES + D + + R+ F G + VP YPSG + + +GP NP+ A E+ ++ AF A+PAF++RE++ Sbjct: 156 YDVILIDGSDPAGPAEGLFNQTFFEHCRRILRPGGVFATQSESPEAFRQVHIDTVRLIRQVF-GYADPLYGWVPMYPSGWWSWTFAAIDGPRYR-----NPLPARAAAISAGCEI--WSPRWQQGAFEAIPAFIERELT 286
BLAST of CN185677 vs. ExPASy Swiss-Prot
Match: SPEE_ANATD (Spermidine synthase OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=speE PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.171e-11 Identity = 42/134 (31.34%), Postives = 71/134 (52.99%), Query Frame = -1 Query: 198 YDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMGLHTHLIEDMISICRETFKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAAFALPAFLK 599 +D IIVDS+DPVGPA L + F+ + + L+ G+ ES LI+++ + F + Y +PTYPSG+ F + S + +P+E ++ + + + ++YN E+H A FALP F++ Sbjct: 152 FDVIIVDSTDPVGPAVGLFQDSFYKAVFECLKEDGLFVAQTESPFYDQDLIKNVFHAVKSIFPITRLYL-GFIPTYPSGLWSFTLGSKK---------YDPLE-VDVSRIKRIDTKYYNPELHKALFALPTFVQ 274
BLAST of CN185677 vs. ExPASy Swiss-Prot
Match: SPEE_PROM1 (Spermidine synthase OS=Prochlorococcus marinus (strain NATL1A) GN=speE PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.317e-11 Identity = 44/142 (30.99%), Postives = 70/142 (49.30%), Query Frame = -1 Query: 186 YDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMGLHTHLIEDMISICRETFKGSVHYA---WASVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAAF-ALPAFLKREVS 599 YD II+D +DP+GP++EL F + L+PGGVL +ES + +++ I RE F YA + SV YPSG+ + S E P ++ P K + + ++ AF +PAF++RE++ Sbjct: 156 YDVIIIDGADPIGPSKELFSNSFLKDCKRILKPGGVLATQSESPESFQEIHINIVKILREIF----DYADPMYGSVSIYPSGLWSWAFASMENP--KYIYP-----KKSRVKEISENCQVWSERWQQGAFNTIPAFIERELA 286 The following BLAST results are available for this feature:
BLAST of CN185677 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185677 ID=CN185677; Name=CN185677; organism=Citrus sinensis; type=EST; length=602bpback to top |