CN185675
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185675 vs. ExPASy Swiss-Prot
Match: TLP9_ARATH (Tubby-like F-box protein 9 OS=Arabidopsis thaliana GN=TULP9 PE=1 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 6.442e-39 Identity = 78/144 (54.17%), Postives = 106/144 (73.61%), Query Frame = 1 Query: 202 ELLGEIIRRVETTEDS-WPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPSCLKQPGPREFPHQCLIRRNKKTSTFYLYLALTPSFSEKGKFLLAARRYRRGAHSEYIISLDAGDLSQGSNAYVGKLSSDFLGTNFTIYD 630 ELL EI+ RVET + WP R+NVVACA VC+ WR +TK+IV P S K+TFP LKQ GPR+ QC I+RN+ T +++LYL LT S ++ GKFLLAA + +R ++YIISL + D+S+ SNAY+G++ S+FLGT FT++D Sbjct: 39 ELLREILIRVETVDGGDWPSRRNVVACAGVCRSWRILTKEIVAVPEFSSKLTFPISLKQSGPRDSLVQCFIKRNRNTQSYHLYLGLTTSLTDNGKFLLAASKLKRATCTDYIISLRSDDISKRSNAYLGRMRSNFLGTKFTVFD 182
BLAST of CN185675 vs. ExPASy Swiss-Prot
Match: TLP11_ARATH (Tubby-like F-box protein 11 OS=Arabidopsis thaliana GN=TULP11 PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 4.321e-35 Identity = 74/144 (51.39%), Postives = 102/144 (70.83%), Query Frame = 1 Query: 202 ELLGEIIRRVETTEDS-WPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPSCLKQPGPREFPHQCLIRRNKKTSTFYLYLALTPSFSEKGKFLLAARRYRRGAHSEYIISLDAGDLSQGSNAYVGKLSSDFLGTNFTIYD 630 ELL EI+ RVE + WP R++VVACA VC+ WR + + V P +S K+TFP LKQPGPR+ QC I+RN+ T +++LYL LT S ++ GKFLLAA + + ++YIISL + D+S+ S AYVGK+ S+FLGT FT++D Sbjct: 45 ELLREILIRVEAADGGGWPSRRSVVACAGVCRGWRLLMNETVVVPEISSKLTFPISLKQPGPRDSLVQCFIKRNRITQSYHLYLGLTNSLTDDGKFLLAACKLKHTTCTDYIISLRSDDMSRRSQAYVGKVRSNFLGTKFTVFD 188
BLAST of CN185675 vs. ExPASy Swiss-Prot
Match: TLP4_ARATH (Putative Tubby-like protein 4 OS=Arabidopsis thaliana GN=TULP4 PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 5.478e-22 Identity = 46/84 (54.76%), Postives = 60/84 (71.43%), Query Frame = 1 Query: 199 PELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPSCLKQPGPREFPHQCLIRRNKKTSTFYLYL 450 PELL +++ R+E +ED+WP R+NVV+C VCK WR+I K+IV P +S K TFP LKQPGP QC ++RN+ TFYLYL Sbjct: 3 PELLRDVLMRIERSEDTWPSRKNVVSCVGVCKNWRQIFKEIVNVPEVSSKFTFPISLKQPGPGGSLVQCYVKRNRSNQTFYLYL 86
BLAST of CN185675 vs. ExPASy Swiss-Prot
Match: TUB_RAT (Tubby protein homolog OS=Rattus norvegicus GN=Tub PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.422e-11 Identity = 38/95 (40.00%), Postives = 58/95 (61.05%), Query Frame = 1 Query: 373 QPGPREFPHQCLIRRNKKTS------TFYLYLALTPSFSEKGK--FLLAARRYRRGAHSEYIISLDAGDLSQGSNAYVGKLSSDFLGTNFTIYDS 633 +P P+ +C I R+KK T++L+L E GK FLLA R+ ++ S Y+IS+D DLS+G ++Y+GKL S+ +GT FT+YD+ Sbjct: 256 RPAPQGITIKCRITRDKKGMDRGMYPTYFLHLD-----REDGKKVFLLAGRKRKKSKTSNYLISVDPTDLSRGGDSYIGKLRSNLMGTKFTVYDN 345
BLAST of CN185675 vs. ExPASy Swiss-Prot
Match: TUB_MOUSE (Tubby protein OS=Mus musculus GN=Tub PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.422e-11 Identity = 38/95 (40.00%), Postives = 58/95 (61.05%), Query Frame = 1 Query: 373 QPGPREFPHQCLIRRNKKTS------TFYLYLALTPSFSEKGK--FLLAARRYRRGAHSEYIISLDAGDLSQGSNAYVGKLSSDFLGTNFTIYDS 633 +P P+ +C I R+KK T++L+L E GK FLLA R+ ++ S Y+IS+D DLS+G ++Y+GKL S+ +GT FT+YD+ Sbjct: 256 RPAPQGITIKCRITRDKKGMDRGMYPTYFLHLD-----REDGKKVFLLAGRKRKKSKTSNYLISVDPTDLSRGGDSYIGKLRSNLMGTKFTVYDN 345
BLAST of CN185675 vs. ExPASy Swiss-Prot
Match: TUB_HUMAN (Tubby protein homolog OS=Homo sapiens GN=TUB PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.422e-11 Identity = 38/95 (40.00%), Postives = 58/95 (61.05%), Query Frame = 1 Query: 373 QPGPREFPHQCLIRRNKKTS------TFYLYLALTPSFSEKGK--FLLAARRYRRGAHSEYIISLDAGDLSQGSNAYVGKLSSDFLGTNFTIYDS 633 +P P+ +C I R+KK T++L+L E GK FLLA R+ ++ S Y+IS+D DLS+G ++Y+GKL S+ +GT FT+YD+ Sbjct: 257 RPAPQGITIKCRITRDKKGMDRGMYPTYFLHLD-----REDGKKVFLLAGRKRKKSKTSNYLISVDPTDLSRGGDSYIGKLRSNLMGTKFTVYDN 346 The following BLAST results are available for this feature:
BLAST of CN185675 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185675 ID=CN185675; Name=CN185675; organism=Citrus sinensis; type=EST; length=651bpback to top |