CN185674
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185674 vs. ExPASy Swiss-Prot
Match: HGD_BURCM (Homogentisate 1,2-dioxygenase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=hmgA PE=3 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 6.112e-59 Identity = 111/195 (56.92%), Postives = 146/195 (74.87%), Query Frame = 1 Query: 106 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSY--TTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRG 684 Y SGF N F++EA+ GALP G+NSP P+GLYAEQ+SGT+FT+PR N+RSWLYRI+P+A H PF+P +LVSEF S T P QLRW P+ +P PTDF++GL T+ G GS+ +G AIH+Y AN+SM + F +ADG+ L+VPQ+GRL+IATE G+L+V P EIAV+P+G RF+V+LPDG +RG Sbjct: 13 YLSGFANEFATEALPGALPHGRNSPQRAPYGLYAEQLSGTAFTAPRGHNRRSWLYRIRPAAVHRPFEPFTGPQ-RLVSEFGDSADVPPTPPNQLRWDPLPMPVEPTDFVEGLVTMAGNGSAAAMNGCAIHLYAANRSMQDRFFYSADGELLIVPQQGRLFIATEFGRLDVEPFEIAVIPRGVRFSVALPDGDARG 206
BLAST of CN185674 vs. ExPASy Swiss-Prot
Match: HGD_BURPS (Homogentisate 1,2-dioxygenase OS=Burkholderia pseudomallei GN=hmgA PE=3 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.505e-57 Identity = 111/204 (54.41%), Postives = 146/204 (71.57%), Query Frame = 1 Query: 88 DFS---DLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSY--TTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRG 684 DFS + Y+SGF N F++EA+ GALP +NSP P+GLYAEQ SGT+FT+PR N+RSWLYRI+P+A H PF+ V ++V+EF S+ T P QLRW P+ +P PTDF+DG T+ G GS+ G AIH+Y AN+SM F +ADG+ L+VPQ+GRL+I TE G+L+V P EIAV+P+G RFAV+LPDG +RG Sbjct: 10 DFSKPGEAGYQSGFANEFATEALPGALPHARNSPQRAPYGLYAEQFSGTAFTAPRGHNRRSWLYRIRPAAVHRPFE-LVSGERRIVAEFGDSDDVPPTPPNQLRWDPLPMPAQPTDFVDGWVTMAGNGSAAAMSGCAIHLYAANRSMRERFFYSADGELLIVPQEGRLFIMTELGRLDVEPFEIAVIPRGVRFAVALPDGRARG 212
BLAST of CN185674 vs. ExPASy Swiss-Prot
Match: HGD_BURP1 (Homogentisate 1,2-dioxygenase OS=Burkholderia pseudomallei (strain 1710b) GN=hmgA PE=3 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.505e-57 Identity = 111/204 (54.41%), Postives = 146/204 (71.57%), Query Frame = 1 Query: 88 DFS---DLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSY--TTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRG 684 DFS + Y+SGF N F++EA+ GALP +NSP P+GLYAEQ SGT+FT+PR N+RSWLYRI+P+A H PF+ V ++V+EF S+ T P QLRW P+ +P PTDF+DG T+ G GS+ G AIH+Y AN+SM F +ADG+ L+VPQ+GRL+I TE G+L+V P EIAV+P+G RFAV+LPDG +RG Sbjct: 10 DFSKPGEAGYQSGFANEFATEALPGALPHARNSPQRAPYGLYAEQFSGTAFTAPRGHNRRSWLYRIRPAAVHRPFE-LVSGERRIVAEFGDSDDVPPTPPNQLRWDPLPMPAQPTDFVDGWVTMAGNGSAAAMSGCAIHLYAANRSMRERFFYSADGELLIVPQEGRLFIMTELGRLDVEPFEIAVIPRGVRFAVALPDGRARG 212
BLAST of CN185674 vs. ExPASy Swiss-Prot
Match: HGD_BURP0 (Homogentisate 1,2-dioxygenase OS=Burkholderia pseudomallei (strain 1106a) GN=hmgA PE=3 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.505e-57 Identity = 111/204 (54.41%), Postives = 146/204 (71.57%), Query Frame = 1 Query: 88 DFS---DLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSY--TTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRG 684 DFS + Y+SGF N F++EA+ GALP +NSP P+GLYAEQ SGT+FT+PR N+RSWLYRI+P+A H PF+ V ++V+EF S+ T P QLRW P+ +P PTDF+DG T+ G GS+ G AIH+Y AN+SM F +ADG+ L+VPQ+GRL+I TE G+L+V P EIAV+P+G RFAV+LPDG +RG Sbjct: 10 DFSKPGEAGYQSGFANEFATEALPGALPHARNSPQRAPYGLYAEQFSGTAFTAPRGHNRRSWLYRIRPAAVHRPFE-LVSGERRIVAEFGDSDDVPPTPPNQLRWDPLPMPAQPTDFVDGWVTMAGNGSAAAMSGCAIHLYAANRSMRERFFYSADGELLIVPQEGRLFIMTELGRLDVEPFEIAVIPRGVRFAVALPDGRARG 212
BLAST of CN185674 vs. ExPASy Swiss-Prot
Match: HGD_BURMS (Homogentisate 1,2-dioxygenase OS=Burkholderia mallei (strain SAVP1) GN=hmgA PE=3 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.505e-57 Identity = 111/204 (54.41%), Postives = 146/204 (71.57%), Query Frame = 1 Query: 88 DFS---DLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSY--TTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRG 684 DFS + Y+SGF N F++EA+ GALP +NSP P+GLYAEQ SGT+FT+PR N+RSWLYRI+P+A H PF+ V ++V+EF S+ T P QLRW P+ +P PTDF+DG T+ G GS+ G AIH+Y AN+SM F +ADG+ L+VPQ+GRL+I TE G+L+V P EIAV+P+G RFAV+LPDG +RG Sbjct: 10 DFSKPGEAGYQSGFANEFATEALPGALPHARNSPQRAPYGLYAEQFSGTAFTAPRGHNRRSWLYRIRPAAVHRPFE-LVSGERRIVAEFGDSDDVPPTPPNQLRWDPLPMPAQPTDFVDGWVTMAGNGSAAAMSGCAIHLYAANRSMRERFFYSADGELLIVPQEGRLFIMTELGRLDVEPFEIAVIPRGVRFAVALPDGRARG 212
BLAST of CN185674 vs. ExPASy Swiss-Prot
Match: HGD_BURMA (Homogentisate 1,2-dioxygenase OS=Burkholderia mallei GN=hmgA PE=3 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.505e-57 Identity = 111/204 (54.41%), Postives = 146/204 (71.57%), Query Frame = 1 Query: 88 DFS---DLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSY--TTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRG 684 DFS + Y+SGF N F++EA+ GALP +NSP P+GLYAEQ SGT+FT+PR N+RSWLYRI+P+A H PF+ V ++V+EF S+ T P QLRW P+ +P PTDF+DG T+ G GS+ G AIH+Y AN+SM F +ADG+ L+VPQ+GRL+I TE G+L+V P EIAV+P+G RFAV+LPDG +RG Sbjct: 10 DFSKPGEAGYQSGFANEFATEALPGALPHARNSPQRAPYGLYAEQFSGTAFTAPRGHNRRSWLYRIRPAAVHRPFE-LVSGERRIVAEFGDSDDVPPTPPNQLRWDPLPMPAQPTDFVDGWVTMAGNGSAAAMSGCAIHLYAANRSMRERFFYSADGELLIVPQEGRLFIMTELGRLDVEPFEIAVIPRGVRFAVALPDGRARG 212
BLAST of CN185674 vs. ExPASy Swiss-Prot
Match: HGD_BURM9 (Homogentisate 1,2-dioxygenase OS=Burkholderia mallei (strain NCTC 10229) GN=hmgA PE=3 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.505e-57 Identity = 111/204 (54.41%), Postives = 146/204 (71.57%), Query Frame = 1 Query: 88 DFS---DLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSY--TTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRG 684 DFS + Y+SGF N F++EA+ GALP +NSP P+GLYAEQ SGT+FT+PR N+RSWLYRI+P+A H PF+ V ++V+EF S+ T P QLRW P+ +P PTDF+DG T+ G GS+ G AIH+Y AN+SM F +ADG+ L+VPQ+GRL+I TE G+L+V P EIAV+P+G RFAV+LPDG +RG Sbjct: 10 DFSKPGEAGYQSGFANEFATEALPGALPHARNSPQRAPYGLYAEQFSGTAFTAPRGHNRRSWLYRIRPAAVHRPFE-LVSGERRIVAEFGDSDDVPPTPPNQLRWDPLPMPAQPTDFVDGWVTMAGNGSAAAMSGCAIHLYAANRSMRERFFYSADGELLIVPQEGRLFIMTELGRLDVEPFEIAVIPRGVRFAVALPDGRARG 212
BLAST of CN185674 vs. ExPASy Swiss-Prot
Match: HGD_BURM7 (Homogentisate 1,2-dioxygenase OS=Burkholderia mallei (strain NCTC 10247) GN=hmgA PE=3 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.505e-57 Identity = 111/204 (54.41%), Postives = 146/204 (71.57%), Query Frame = 1 Query: 88 DFS---DLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSY--TTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRG 684 DFS + Y+SGF N F++EA+ GALP +NSP P+GLYAEQ SGT+FT+PR N+RSWLYRI+P+A H PF+ V ++V+EF S+ T P QLRW P+ +P PTDF+DG T+ G GS+ G AIH+Y AN+SM F +ADG+ L+VPQ+GRL+I TE G+L+V P EIAV+P+G RFAV+LPDG +RG Sbjct: 10 DFSKPGEAGYQSGFANEFATEALPGALPHARNSPQRAPYGLYAEQFSGTAFTAPRGHNRRSWLYRIRPAAVHRPFE-LVSGERRIVAEFGDSDDVPPTPPNQLRWDPLPMPAQPTDFVDGWVTMAGNGSAAAMSGCAIHLYAANRSMRERFFYSADGELLIVPQEGRLFIMTELGRLDVEPFEIAVIPRGVRFAVALPDGRARG 212
BLAST of CN185674 vs. ExPASy Swiss-Prot
Match: HGD_BURTA (Homogentisate 1,2-dioxygenase OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=hmgA PE=3 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 2.568e-57 Identity = 110/204 (53.92%), Postives = 146/204 (71.57%), Query Frame = 1 Query: 88 DFS---DLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSY--TTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRG 684 DFS + Y+SGF N F++EA+ GALP +NSP P+GLYAEQ+SGT+FT+PR N+RSWLYRI+P+A H PF+ V ++V++F S T P QLRW P+ +P PTDF+DG T+ G GS+ G AIH+Y AN+SM F +ADG+ L+VPQ+GRL+I TE G+L+V P EIAV+P+G RFAV+LPDG +RG Sbjct: 10 DFSKPGEAGYQSGFANEFATEALPGALPHARNSPQRAPYGLYAEQLSGTAFTAPRGHNRRSWLYRIRPAAVHRPFE-LVSGERRIVADFGDSGDVPPTPPNQLRWDPLPMPAQPTDFVDGWVTMAGNGSAAAMSGCAIHLYAANRSMRERFFYSADGELLIVPQEGRLFIMTELGRLDVEPFEIAVIPRGVRFAVALPDGRARG 212
BLAST of CN185674 vs. ExPASy Swiss-Prot
Match: HGD_BORPD (Homogentisate 1,2-dioxygenase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=hmgA PE=3 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 9.758e-57 Identity = 108/195 (55.38%), Postives = 141/195 (72.31%), Query Frame = 1 Query: 100 LNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRG 684 L Y+SGFGN +++EA+ GALP G+NSP CP+GLYAEQ+SGT+FT+PR N+RSWLYRI+P+A H PF+P A + +S+F + TP QLRW P+ +PD+PTDFI+G+ T G G G IH+Y AN+SM F NADG+ L+VPQ+GRL +ATE G +EV P EIAV+P+G R V LPDG +RG Sbjct: 3 LQYQSGFGNDWATEALPGALPAGRNSPQRCPYGLYAEQLSGTAFTAPRAENRRSWLYRIRPAAQHRPFEPFDGA-ARWLSDFGAAP--VTPNQLRWSPLPLPDAPTDFIEGVQTWGGNGGPGEHGGVGIHLYAANRSMQGRYFYNADGELLIVPQQGRLRLATELGIIEVEPLEIAVIPRGVRLRVDLPDGQARG 194 The following BLAST results are available for this feature:
BLAST of CN185674 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185674 ID=CN185674; Name=CN185674; organism=Citrus sinensis; type=EST; length=685bpback to top |